Csem025723.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cecidostiba semifascia
Gene Symbol
ZNF236
Assembly
GCA_900474235.1
Location
UCQR01090287.1:7977-22304[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 1.7e-05 0.0017 19.2 0.6 1 23 182 204 182 204 0.98
2 26 0.0002 0.02 15.8 1.6 1 23 210 232 210 232 0.97
3 26 2.6e-06 0.00027 21.8 0.5 2 23 238 259 238 259 0.98
4 26 0.0019 0.19 12.8 0.7 1 23 265 287 265 287 0.97
5 26 0.0011 0.11 13.6 2.1 2 23 298 319 297 319 0.97
6 26 3.6e-06 0.00036 21.3 0.7 1 23 340 362 340 362 0.99
7 26 0.00022 0.023 15.7 0.9 1 20 368 387 368 390 0.96
8 26 2.4e-05 0.0024 18.7 0.3 1 23 396 419 396 419 0.97
9 26 0.00018 0.019 16.0 2.0 1 23 428 451 428 451 0.98
10 26 3e-07 3.1e-05 24.7 2.0 1 23 544 566 544 566 0.99
11 26 5.1e-05 0.0051 17.7 2.4 1 23 572 594 572 594 0.97
12 26 0.0021 0.21 12.7 1.0 1 22 600 621 600 622 0.91
13 26 0.21 21 6.4 2.0 1 23 626 649 626 649 0.94
14 26 0.00012 0.012 16.6 5.7 1 23 710 732 710 732 0.98
15 26 8.5e-07 8.6e-05 23.3 0.3 1 23 738 760 738 760 0.98
16 26 7.4e-05 0.0075 17.2 3.5 1 23 766 788 766 788 0.98
17 26 0.00029 0.029 15.3 5.7 1 23 794 816 794 816 0.97
18 26 8e-06 0.00081 20.2 2.8 1 23 1136 1158 1136 1158 0.98
19 26 0.0047 0.47 11.5 2.2 1 23 1164 1186 1164 1186 0.96
20 26 9.6e-08 9.6e-06 26.3 2.1 2 23 1221 1242 1220 1242 0.98
21 26 0.00017 0.017 16.1 3.2 1 23 1248 1270 1248 1270 0.99
22 26 3.7e-05 0.0037 18.2 1.2 3 23 1278 1298 1276 1298 0.98
23 26 0.0031 0.31 12.1 3.8 1 23 1304 1326 1304 1326 0.98
24 26 0.00016 0.016 16.2 0.7 1 23 1517 1539 1517 1539 0.98
25 26 8.7e-06 0.00088 20.1 4.5 1 23 1545 1567 1545 1567 0.97
26 26 2.9e-07 3e-05 24.8 2.5 1 23 1573 1596 1573 1596 0.98

Sequence Information

Coding Sequence
ATGGAGGACATGGGATTCATGAATATGCTCACTGATGATGGCACTACATTGGTGTCCGTACACCagagagcCGATGGAAGTCTGGAACTTGTATCAACACCAGTGACAATCATAAAAGATGCGTGTAATAGCCCTACTATGCAGGGGCTGAATGCAACTAGTGCagactttattttaaatcaaacTAAGATCAACAATGCTCTTCCACAAATTATTCAGCAACCTAACGTAACTTCCATTGATGTGATAAATATTGATTCTGAAGTTGTACAACTGGCCAGTGATCAGCAGTACTGTAATCCAGAAATATCGAATAATTCATTACCTGACAATGTAAAACAGATATCAAATATAGAAAGTAGCACAGCAGTAGGTGTTGTAGAAGTGGCAAGTGAAAAGGAAGAAACACAAAAAGaatcttcaaaaaaatcaCAAGAATCCCAGAGGCATAAAAAAGGCTCACCACCTTCTAAACAGGATAACCATAAGAATCTTGGCAGGCCAAAAAAACATAGTAAAAATGCTAATGGAGTGacaatatatttcaagtgCGACGTCTGTGGTTTGGGATTTCGTAAACAGTACTTGATGGAAAGACATATGCAAGAACATGCCCCAGAGAAACCTCATCACTGTCCAAAATGTCCTGCATCATTTAATGTTCCAACAAATTTCACCTTGCACATGGCAACACATAATATAGGTGAGCCAAAATGCCCACACTGTGGACGAAGATTTGCACGAATGGCCAGCCTCAAGGCTCACATGGCAGTACACGAGGTGgatgaaaatcattattgcACTGAGTGTGAAAGTGTCTTTGAAACAAAGGCCCAGTTGGACGCCCACTTGAAGCTACACAACGAAAAATGGTCAACGGACGACCACAAGCGCTGCAAGCTCTGCCGCAAGCAGTTCACCCAACCCGTCCTCTATCGTCAGCATTTACGCGATCACTACAAAATGCAGACCAAGTGCCCGAAGAAGATGAAGAGCGGAGTCAGAATCGGCACCATTTACAAGTGCAGACTGTGCCTCAAGTCCTTCGAGAAACCTAGTCAACTGGCCAGGCACATCAGGGTACACACCGGCGAAAAACCCTAcaagTGCAATCTATGCAGTCGAAGCTTTTCGCAAAAAGGTTCTGTGAGGATTCATATGTGGCAGCACAATGGAATCAGGCCTTACAGTTGTTCTGTTTGCAAGGCTAAATTTAGTCaaaaagGCAACTTGAACGCACACGTTCTGCGAGTCCACAAGATTCATGAAGGCGCGCCGATCTACCGGTGCACGCGCTGTCCCTGTGTCTTCAAGAAGCTCGGCAGTCTGAACGGCCACATGAGACGAGCGCACGCCGATGCCGACAATAACACCACTGAGGAAACAGCCGAGGAGGTCCAGGAAGCTCAGGAGACGATCGTCGACCTCAGCAGCAACGACGTAGAAACACCGTCGGAGACCGTACCGAGTGCAGGGACGACGGAACTGCCGAAGGACGTCGAGGACGGTTTCGTTCTTACGGATGACAAGGAGCAGACTGCCGTCGTCACTATTTTGGATAAAATTGCTAATGAGTCTAAGGGAAAGTACGTTAAGATAAAGCAGCGATTTGTAAATAACTGTATACAGTACGAATGCGATTTCTGTGATAAAACGTTCAAGAAGTCATCCGACCTCATGAGGCACACAAGGGTGCACACACGGGAAAAGCCTTTCAAGTGCAATACGTGCGATCGATCCTTTACCCTCAAGTCTACCTTAATGTCGCACGAGAAGCTTCACGAGAATGCTAATAAGTACAAGTGCCAAAACTGCAACATGTCTTTCAATACGGAAAATGCTCTTAGATCTCACGACAAAATCCACAACAAAATTCACAAATGCATAATCTGCGTAAAGACCTTTTCGAGCTTCGAGCGTTTGCAGGAGCATTCCATGACTTTGCACATGGGCGGCAAAGGCGAACCAGGTCGTCCAAAAACACAAGTACCATCGGATGTGCAGAGCCTGGTGCCCAAAGTCGTGTTGAAGGAGCCGCTCGTTCTAACCGAGCTTAGTAACGGTCTGCTTCATGCCCAGCCGAAGTTCGGGAGGACCAGTAAGCTGGCCCATATCAAAGGAAGGCCTCACAAGTGTCCAACCTGTCCGGCCGCTTTTACTAAACTCAGTCATCTTAAACAGCATCATCGAATGCATACCGGGGAAAGGCCGTTCGTCTGTGCTATTTGCGACAGGAGCTTTTCAACCACCGGTGCCCTTAAAGCACATCGTCGAACGCATGATATGTTAAAACCTTACCAATGTACAATATGTAGCATGACTTTTTCTACTTTGAGTAGTATGAAGAGGCATCATGTAACGCACAGCAATAAAAGACCATTTATGTGTCCGTACTGCAATAAAACCTTTAAAACGACGGTGAACTGTAAAAAGCACATGAAACTGCATAAACAAGAAATCGCGCAACAACAACTAGAAAGCCAGAAGacacagcaacagcagtcTTCAAATTCAAATGCAATAGAAACAGTCCCTACAACAGATCAAATCGCTACCAATAATCAACAAATGACTTTTAAGCCTGTTGCGACTGACATAACACAGAACTTAAATGAACAACTTCAAATAATGAACAAGGACAGTAATTCTCCGGAATTGAATTCTACACTATCTCAAAATATTCACGTATCGTGTCATCAAGGAAACAATATATCCATAGTAGAAAATTCTAACATAGGTCCGACCCAAACATTGCATGCCGATGAGACAGGCACTATTACCCTATCTAACTATACGGGTGACCCGACACTTACACCTGAGAGTATTAGAGTGATCGAAGAGACTCTGAATCAACAGTTGTCCAATATTGGTTTAAACATGGCGCTTAACAGCAGCGTTAGGCAGATTGAGGAACATAATAATACTTCTACAGTTAATCGGGATCAACCTACTTTGAGCataatttatgataaaaatgtGGCATCACCTATGAATACGAATACCATGAGTTCAAACGTTTTTTCTCCTCAATTCGAAAGTTTTGATATCAATCAAATAACGCTTCagggtgacaATGAAATTGATTTAGGAATGATACAAAACAATTCAGCACATATGACAAACATTCTACCCAATATGAttcatcaaaatcaaaattatagtTTGCAATTTGTCAATGATAATCTTTACATGAATACAATTCTTAAACAAAGCCAAGTAAATcagataaaagataataatccTTTGAATGAACCAGTAAAAGTTGTTACAAGTGGCCAAGTTAGTGGTGACGAGAACAAAACTTTggacaaagaaaataatctaCAGTGCCATTTATGCAGCATGCAAGAATTAAGTGTTGATGACTTGAAGGAACACCTTAAAACCCATCAAGAGCCTAAAGAATTTGAATGCACGCAATGTTTTACGAAATTTCGTACTAGTGCAGGCCTCAAGAGGCATATGAAAACTCACGATACACAGGAGACTCATAAATGTTACGAATGCAATCAAGAATTTTCCACGACGTTACAACTAAGAGAACACATAACAGAGCATGTCAAACACGAATTGAAACTTAAAAATGTAGTGGATGCTGATTCTATAgctaaaaatgttaaaaaggGAAAAAACAAAGATGATACTGCCAATAAGGATAATAAATGCAAATACTGTCCAAAGACTTTTCGAAAACCCAGTGATCTCACAAGGCACGTTAGAACGCATACCGGTGAGCGACCATATCAGTGCCAATATTGCAATAAGAGTTTTGCTGTTAAGTGCACATTAGATTCTCATTTAAAAGTACATAAAGGCGATAAATTGTTCGGTTGCAACGTGTGCAACACCATGTTTACAACAAAGAACAGTCTCAAAGTTCATTTACGACTCCATACAGgagCCAAACCATTCAAGTGTTCGAAGTGTGACATGCAGTTTCGCACCTCTGGTCATCGTAAGGTTCACGAGATGTCCCACATGCGGGAAAGTAAATCCGTAAACCAGCCATCTTTTATTGACGGAAGTTTGGATTCAGTAAATACCGAAGAGTCAGCAGAATCACCTTGTGACACTCGAATCGTGCAGATTGTACACACAGTACCTATTCATCAACAATTAGAACAAGAAAACACGAATTCCATCAATTTCAATTCCAGCAATGTTACGATTAGTCCGCAAGTGGGCTTCAGCGTGGACGATGGATCGAGTCTGTTGAGTTTAAACGAAAACAATCAGTTGGTAGCgaatcttgaatttttactGGCTAACGGCTTGGTCAACATATCTTCCGAGGGTCTGCAGTTGTCTAACGACTATGTCGCGCAGAAGGTGCAGGAACAGCCAAATGAAGCAGGTGCACAAGTGATCTTTGCAAGTGAATTGCCGGTTATGGATGTACAGATAGGAGGGATGCATCAAAATACGAATAACATCGAGATGGAGAACTGCATGGTCCTGCCGCTGGATAATTTCGATTCTATTGTGGAGGAAAGGAATGATGAGGACGAACTGAAAGAGGATGATAACCCAAGCTCAACAGGACCACGTTACAACTGCGAAATCTGCGGTAAATGGTTCTCCAAACCTTGCCAGGTCGAGCGACACATACGCGTACACACAGGTGAACGCCCGTTCAACTGTGAACTTTGCAACAAATCGTTCTCCCAAAAGTCGTCATTGCAGTTGCATCAAAAACACCACACCGGCGAAAGACCTTACAGCTGTCCACATTGCGATCAATCGTTTACTCAAAGCGGTAACCTGCAGACCCATGTGCGTCGCAAGCACAAGCTTGATACTGGGAAACGCCAGCAGTTTGTCaatgttaattattatgaTCCGAGTAAAATTGTGACGtcggagcagcagcaacttaTGTTTGATAGGTCGATCGGGTTTGAGGATATGTCGATCGTTGAGTTGCTTAATTGA
Protein Sequence
MEDMGFMNMLTDDGTTLVSVHQRADGSLELVSTPVTIIKDACNSPTMQGLNATSADFILNQTKINNALPQIIQQPNVTSIDVINIDSEVVQLASDQQYCNPEISNNSLPDNVKQISNIESSTAVGVVEVASEKEETQKESSKKSQESQRHKKGSPPSKQDNHKNLGRPKKHSKNANGVTIYFKCDVCGLGFRKQYLMERHMQEHAPEKPHHCPKCPASFNVPTNFTLHMATHNIGEPKCPHCGRRFARMASLKAHMAVHEVDENHYCTECESVFETKAQLDAHLKLHNEKWSTDDHKRCKLCRKQFTQPVLYRQHLRDHYKMQTKCPKKMKSGVRIGTIYKCRLCLKSFEKPSQLARHIRVHTGEKPYKCNLCSRSFSQKGSVRIHMWQHNGIRPYSCSVCKAKFSQKGNLNAHVLRVHKIHEGAPIYRCTRCPCVFKKLGSLNGHMRRAHADADNNTTEETAEEVQEAQETIVDLSSNDVETPSETVPSAGTTELPKDVEDGFVLTDDKEQTAVVTILDKIANESKGKYVKIKQRFVNNCIQYECDFCDKTFKKSSDLMRHTRVHTREKPFKCNTCDRSFTLKSTLMSHEKLHENANKYKCQNCNMSFNTENALRSHDKIHNKIHKCIICVKTFSSFERLQEHSMTLHMGGKGEPGRPKTQVPSDVQSLVPKVVLKEPLVLTELSNGLLHAQPKFGRTSKLAHIKGRPHKCPTCPAAFTKLSHLKQHHRMHTGERPFVCAICDRSFSTTGALKAHRRTHDMLKPYQCTICSMTFSTLSSMKRHHVTHSNKRPFMCPYCNKTFKTTVNCKKHMKLHKQEIAQQQLESQKTQQQQSSNSNAIETVPTTDQIATNNQQMTFKPVATDITQNLNEQLQIMNKDSNSPELNSTLSQNIHVSCHQGNNISIVENSNIGPTQTLHADETGTITLSNYTGDPTLTPESIRVIEETLNQQLSNIGLNMALNSSVRQIEEHNNTSTVNRDQPTLSIIYDKNVASPMNTNTMSSNVFSPQFESFDINQITLQGDNEIDLGMIQNNSAHMTNILPNMIHQNQNYSLQFVNDNLYMNTILKQSQVNQIKDNNPLNEPVKVVTSGQVSGDENKTLDKENNLQCHLCSMQELSVDDLKEHLKTHQEPKEFECTQCFTKFRTSAGLKRHMKTHDTQETHKCYECNQEFSTTLQLREHITEHVKHELKLKNVVDADSIAKNVKKGKNKDDTANKDNKCKYCPKTFRKPSDLTRHVRTHTGERPYQCQYCNKSFAVKCTLDSHLKVHKGDKLFGCNVCNTMFTTKNSLKVHLRLHTGAKPFKCSKCDMQFRTSGHRKVHEMSHMRESKSVNQPSFIDGSLDSVNTEESAESPCDTRIVQIVHTVPIHQQLEQENTNSINFNSSNVTISPQVGFSVDDGSSLLSLNENNQLVANLEFLLANGLVNISSEGLQLSNDYVAQKVQEQPNEAGAQVIFASELPVMDVQIGGMHQNTNNIEMENCMVLPLDNFDSIVEERNDEDELKEDDNPSSTGPRYNCEICGKWFSKPCQVERHIRVHTGERPFNCELCNKSFSQKSSLQLHQKHHTGERPYSCPHCDQSFTQSGNLQTHVRRKHKLDTGKRQQFVNVNYYDPSKIVTSEQQQLMFDRSIGFEDMSIVELLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00286637;
90% Identity
-
80% Identity
-