Csem003554.1
Basic Information
- Insect
- Cecidostiba semifascia
- Gene Symbol
- CAMTA2
- Assembly
- GCA_900474235.1
- Location
- UCQR01084792.1:1-7989[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.9e-24 7.6e-20 71.3 0.5 11 77 1 66 1 77 0.95 2 3 0.21 5.4e+03 -2.4 0.0 108 116 79 87 68 87 0.79 3 3 0.59 1.5e+04 -3.8 0.8 83 83 255 255 236 285 0.51
Sequence Information
- Coding Sequence
- GAGATCGCGGCGATCCTAATAAGCTTTCAGCGTCACGCAGAATGGCAAAGTCGGGAGGTGAAGGTGCGACCTCGAAGCGGCTCGATGCTGCTCTACTCGAGAAAGAAAGTTCGTTATCGACGGGACGGCTATTGCTGGAAGAAACGAAAGGACGGCAAGACCACGAGGGAAGATCACATGAAGCTGAAGGTATATGAGcacatatacaatacacatatacNNNNNNNNNNNNNNNNNNNNCTGGTGCACTACCTGAACGTGCCCTATCCGGACGGAGATGCCAAGTTGGCGGCGCTACCGCCGTGTCTCGCTCTACCGCCCGACAAGAAGGAATGGACGCGCGACGAGCTGGCCTCGCAGCTCAGGCCGATGTTCCTCGGCGGCGATGAGGTCGATCCTGGAATCGGCCTTGGACCCGCTCATCCAAGCCAGCATCCCGTCGACATGATCGTCTCGCAGCTGCTCGACAGGCAGAGGGCTACTGTCGTCAATTCGAGCGCGGCCGCGCAGCTCGCGCCAAGGAGACTCACACCCGACAATCAGGTCTCTTCGACTACCGGAGGTCAACAGCCAAGCACGACGGCGTCGACGACTCCGCGGGTTTACTCGAGACATTCCCACTCGACTCAGAGCCAGCAGCCGGCTCCGCTAGTTTTAAGTTTGCAACAGATTCAGGGTGGCGGCGGCCTTCTCATACTTAACAGTCAGCCATATCatcaccagcagcaacagcagcaggttcagcagcagcagcagacacaaagtcaacaacagcagcagcagcagaatcaGAATCAGCAGGTGGACATGCAGCAAGTGACggatcagcagcagcagcagcagcatgttGTGCAACAGACCAGCATAGATCGCGAGCAGCAGACGCAGCAGCACGAGATCGACTCCAAGGACAGTAGTCACGGGGGTGGCATCGTGTCGGACTGCACGGGCTCGCAGCAGTCGTCCGTCGTAGCCGACTTCGTGGAGACGCTGGACCTGAGTCAGGAGGACATCCAGCGCACGCTGTCGGCGAACATGGTGCACCCGTCGCCGTCACCTTCGCCGGCGGACAACAGCATAATCAATCCGATGGACTTTATCGACTCGACGGACGACGTGCTGGTGAACCTCGACGCTTTCGACATGTTCAGCGACCTGCCGGAGCTGCACGACTTCGAGGCCGCCGCGAACGAGGCCGAGAGCAACCACAAGACTGATAGTAGCGTGAGGATCAGCCCTGAGAACGGTGCGACCGGTACCGAACACGGCTGTCATCCAGCCGCCCCCGTCCACATCGCCGAGTACAGCCCCGAGTGGAGCTACACCGAGGGTGGCGTCAagGTGCTGGTGGCGGGGCCGTGGACGGGCGGCGGTTCGCAGTCGTACTCGATCCTGTTCGATGGCGAGCCGGTGGAGGCTTGTCTAGTGCAACCGGGGGTGTTGCGCTGCAGGTGTCCGGCACACGCGGCGGGGGTCGCCTCGCTGCAGGTTGCCTGCGATGGTTTCGTCGTCTCGGACAGCGTCGCCTTCGAGTATCGCAGGCCGCCTCAGAGCGAACCTAGTCCTGAGAAAGCACTGCTCGACCGATTGGCCGACGTTGAGACCAGGCTTCAGGGACCCGGGCCACCCTCGCCGGCTGCGCATCTCGAGGAGAGGCTCGTTGCCTACTGTCAgGACGCAGTGGTAAGACCGTGGCGTACCGGTGCCGAACCTCTGCAGTCCGGCGGTCCAACGCTGCTACACCTGGCGGCGGGTCTGGGCTACTCTCGACTGGCCTGTGCGTTACTGCATTGGCGTGCCGAGAACCCGAGCAGTGTGCTGGACGCCGAGGTGGACGCGCTGAGGCAGGATGCCGCCGGTCTGACGCCGCTTGCCTGGGCCTGTGCCGCTGGACACGCCGACACCGCGAGGATACTCTATCGATGGAATGCGATGGCGCTGCGCGTGCGAGATTGTCAGAACAGGAGCGCGACCGAGCTGGCCGCGGAGAACGGCCACACGCTTATCGCCGAAGAGCTGAATCGCTTGGAAGCTCGCCGGCAAGACGAGAGGCTCTTCTTGAGACCGGCCAGCCCGAGCCCTAGGAGGCCTTCCCAAGACAGCGGTCTCGATCTGGCTCTCTGTGGCTCGCCGCTCCTGGACAATATGGAGCTGCTGCAGGACGACGATTCGTCGTTGGGCCTCGGCCAGCAGGGCATGGATAGCTGCCCCAGTCCCCCGGAGTCCGTAG
- Protein Sequence
- EIAAILISFQRHAEWQSREVKVRPRSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVYEHIYNTHIXXXXXXXLVHYLNVPYPDGDAKLAALPPCLALPPDKKEWTRDELASQLRPMFLGGDEVDPGIGLGPAHPSQHPVDMIVSQLLDRQRATVVNSSAAAQLAPRRLTPDNQVSSTTGGQQPSTTASTTPRVYSRHSHSTQSQQPAPLVLSLQQIQGGGGLLILNSQPYHHQQQQQQVQQQQQTQSQQQQQQQNQNQQVDMQQVTDQQQQQQHVVQQTSIDREQQTQQHEIDSKDSSHGGGIVSDCTGSQQSSVVADFVETLDLSQEDIQRTLSANMVHPSPSPSPADNSIINPMDFIDSTDDVLVNLDAFDMFSDLPELHDFEAAANEAESNHKTDSSVRISPENGATGTEHGCHPAAPVHIAEYSPEWSYTEGGVKVLVAGPWTGGGSQSYSILFDGEPVEACLVQPGVLRCRCPAHAAGVASLQVACDGFVVSDSVAFEYRRPPQSEPSPEKALLDRLADVETRLQGPGPPSPAAHLEERLVAYCQDAVVRPWRTGAEPLQSGGPTLLHLAAGLGYSRLACALLHWRAENPSSVLDAEVDALRQDAAGLTPLAWACAAGHADTARILYRWNAMALRVRDCQNRSATELAAENGHTLIAEELNRLEARRQDERLFLRPASPSPRRPSQDSGLDLALCGSPLLDNMELLQDDDSSLGLGQQGMDSCPSPPESV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -