Csem004052.1
Basic Information
- Insect
- Cecidostiba semifascia
- Gene Symbol
- -
- Assembly
- GCA_900474235.1
- Location
- UCQR01087987.1:191-808[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-05 0.058 14.1 0.4 3 42 48 86 46 90 0.76 2 2 9.4e-05 0.099 13.3 0.0 3 45 114 156 113 157 0.96
Sequence Information
- Coding Sequence
- atgatACATAATGAGCTTCCTCACATCCCTATGCaagatttaattaagaaatactATCTTTCTAAAGACAAAACCTTTTCGTATGTAAAGAAAAGATCTGGTCGTATTAGCGATTCTGAAATTAAAGCTATCGTAGAACGTGAATggagtaaaaaagaaattgatcTTTTTATAGAAAAGTACAAAACATACGGGAAGAATCTTTCCAAATACCAAACATGGATTAATAAGAGTGAAAAGGACCTTAAACTTTTCTTAAGATACTTTTTGAAGAAACAAAAGACAATGAAAAACGAAGTCCCACAAAGACTGTCGATTTCTAGAGAAGACATTCTTAAAAGTTGGACTATTGATGAAAGACAAATCTTTGCCATCTACTTCCCCtattttaataagaattgGATAACAATGGCTACCTACTTCCCCCAAAAGACATCGAGTgaattgaaaatgtattaCTCGAAGTATTTTAAAGGCTTAAGCTTTAATGAACAAAAGTTCGAGGCAAGCATTTCTAATCTCAAGATCTTGTTTAATTCACACCCAGTTGTACACGTGGGTGATGAGAGCcaggaaaatttaaatttagaaagcGCAGGCATAATCTTTAAGCGATAA
- Protein Sequence
- MIHNELPHIPMQDLIKKYYLSKDKTFSYVKKRSGRISDSEIKAIVEREWSKKEIDLFIEKYKTYGKNLSKYQTWINKSEKDLKLFLRYFLKKQKTMKNEVPQRLSISREDILKSWTIDERQIFAIYFPYFNKNWITMATYFPQKTSSELKMYYSKYFKGLSFNEQKFEASISNLKILFNSHPVVHVGDESQENLNLESAGIIFKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -