Csem020597.1
Basic Information
- Insect
- Cecidostiba semifascia
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_900474235.1
- Location
- UCQR01019069.1:5201-17222[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-17 1.4e-14 54.0 0.1 1 45 131 176 131 176 0.96 2 2 4.7e-18 2.6e-15 56.4 0.0 1 43 605 648 605 650 0.95
Sequence Information
- Coding Sequence
- ATGGCGGCGTCGGTCGTCGCTGCCGCTCTTAGCGGCACGTATCCGACGCTGTTACCCCAGTGGTGTCTGCCACCACGGGAACCACCGCACATCATCGCCGCAGCGgctgccgctgccgcggcTGCAgcccatcagcagcagcaggagaacCAAGGCGCCGATCAGCCGCTCGATCTCTCCGCAAAGCCCAAAAATTCTCAGGACAACAACATATCTATACTGGAACAACAAAAGATACCTCTACGAATGTCAGCAGCCATCGATCCAAAAGCTATTTTCAACAGTTCATGCTACCGAGCGAAGCCAAGGGTGACGGGTGCGGTGGCAGGTGCGGGTGGTTCGACGCTGACGACAACCGGTGgaggcggtggcggcggtaGGCGCACCTACACCGAGGACGAGCTTCAGGCTGCGCTGCGCGACATCCAGAGCGGCAAACTCGGCACGAGACGAGCAGCCGTTCTCTATGGCATACCACGTTCGACGCTTCGCAACAAGGTCTACAAGCTCGCGATGGAGCGCGAGAGGGATGCGTCCCTCTCGGCTGCTGCCGCGGCGGCAAATTCCACCACGACCGTCACTACCACCACTACCTCCTCCACGACAGCCACGAATCAAcaacacaacaacaacaacgaggTGACGGTGACGACGGTGACTGGTGCCAATGCGAACTCGACGCCTAGTACCACCAGTATCGCCAGcaccagcaccaccaccaccacaacCATCACCACACCAAATACGACCCGACAAAACGCGGCCTCCGCGACAACTCCGCTCCCGCAAGTGGACGAGGCGGACGAGAAGGAGCTATCGGGTGccgaggaggagaaggaggtgGAGAAGGCCCTGCTGAAGCCGTTGCTCTCGCTCGAGGATCTCGTGAGGTTCTCCAGCCTCGAGGGCAGCGGTGGCGAGTCGCTGAGGCAGCTGCTGCAACGTGGACAGGACACCGGTGCCGCCGAGTGGTCGAGCTTCGAGCACGCCAACATCGGGCCTTACATACAGAAGATGCTCGCCGCTGCCTCGCCGTTCAACAAAGGACTGGAGTCGCAAGACTACAGGATCCCGGAGGTCATGCGTCGGCTCATGTGCGAGGACAAGAAGCTCTGCAAAGAGGCTAACGTCAACGGCGACCAGGTCCAGCACATCCACCAAGTCTCGCTGCAGCATCGTCTGCCCCAGTCGGGTCAACGGGCGCCGATGACGAACGACGACTTCAATCCGGCGATCGAGGAGGAGGCAAGCGACAGTGGCCAGGGCCGACCGATCCTCAAGATTCCGTCCTACAAGCCGGCGAGCAGCACGACGCCGGGTCCGAGCAAGAACGGCGCTGAGCCCAACGCCGCTGCGACGGCTTTCGCACAGAGCTTCGCTGCTGCGGCTGCCGCTGCGGCCAATGCCGTCGCCGGTAGTCCTGGTCTCCTCGAGCGCGCCAGTCCCGCGTTCTCCGGCACGAGCTCGCCCACCAATTCGCTCGTCGGCAAGGGCATGGCCGTCAACTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTTCAGGAGGGACAGCAGCCCACCGGCATGCCTGGTCAAGGAGGCCAGTCGGGCCAGTCGATGATCTCGGAGCCGAATCCGTACAAGAGGGGTCGTTACACGCCTCCTCAACAATCGCAACAAGGAGGCGGCCAGCAGTCGGCGCATCAGCAGTCGCAGCAGTCGAAGAGCAGCGCGGCTCAACAGCAGGCCCAGCAGGACAAGAACCAGAACAAGTCGGGTGCCGGTGGTAAGGGCACAAGACCGAAGCGCGGCAAGTACCGCAACTACGACAGGGATAGCCTCGTCGAGGCCGTCAGGGCTGTGCAGAGGGGCGAGATGAGCGTCCACAGGGCTGGCAGCTACTACGGCGTTCCACATTCCACACTCGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGAGGAAGAGGGATCAAAAGCAACCGGACGACAAAGCAAAGGAGCCAACGGCGGCAGGCGCGGCGATCCGTACGACGCCCGCGGCGACGCCGGAGAAGAAACCTCTGCTGAAGCCGCAGAAGCCGTTCACCCCAGCAGCCGGAGCTGGTGGTATGCCAGCGCCAAACGGTCTGAAGATGCCTCCGTTCATGGAGGGCATGCCTATGCCGTTCGGTCACCCGTTCAACTTTTGGGGCCCGGCGCCCTTCATGCCCTCGCCCTTCATACCTGGAGGGCCCAACGTCCCGGGTATCCTACCAGAGCAGTACTTCGCCTCGCAGCGCATGCGCGGCCTCCAGGAACAGCAGCGCAACGCCATCgtccagcagcaacagcgggACGGCGCCACTGCCGAACAGCCAGGCACGTCGAATTCAAGGGGCGCCTCGTTGATAAAATCACCGCGTGAAATGGCCGAGTCCCTGTACGACGGGACGGCGGCGAACGGCAGCTTCCTGGACAACCTGATAAGGTCGAGCCTGGAACCTGGCGCGGCGCGAGGCAACGCCTCCTCTCAACAGgcggcgcagcagcagccggagAACCTGGGCGGTAGTAAGGTCCTGATCGACCAACTCTGCAGGAATTCGCGGCGCACGCCGCTACCGCGAGCGATGCAGCAGGACAGCAGCGAGGATGAGGCGCCGCCGACTGGCTACAAGGCCGCGAGGCCACTACCTGAGCGACCTGAACGCGTACCGACCGTCGACCTGAGCCCATCGCCTTCGGAGCGAGCCAGAGCCACGGACGAAGGCAGCGATAGAGGACTGGCCTCGCCGCCCACGCCGCTGTCGCTGTCCAGGCTCAGCGGTTCCGGCAGGGAGGACGAGACCACCCGGGATTCGAGGAGTAGCCGAGAACGCGAGGTACAGAATGGAGGCGGCAGCGACAAGTCGGAGGAGCGCCATGACTCCAGCACCAAGAAGCTGAACCACTACCCGGACATACACAACCTCTACGCCGTGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCAACACAAGGATAATTTCGCGGCCGCCGCGGGCGCGGCTGTTGGCCTGGCGTCGCAGCTGCAGCGCAGCGGCTACAATAAcacgaacagcagcagcagcagcagcccggcTGCTGCGGGTAACGGCCACACACGCCCGACTACCCCCTGCAACAATCAGTCGTCCTCGGAACGAGCCGACTCACCGCAGGAGCAAGTCTCCTCGCCGCAGCCGCCAAGTCCCCAGCTTGCGCCCATGGAGGAGACGGTGGAGCAGTAG
- Protein Sequence
- MAASVVAAALSGTYPTLLPQWCLPPREPPHIIAAAAAAAAAAAHQQQQENQGADQPLDLSAKPKNSQDNNISILEQQKIPLRMSAAIDPKAIFNSSCYRAKPRVTGAVAGAGGSTLTTTGGGGGGGRRTYTEDELQAALRDIQSGKLGTRRAAVLYGIPRSTLRNKVYKLAMERERDASLSAAAAAANSTTTVTTTTTSSTTATNQQHNNNNEVTVTTVTGANANSTPSTTSIASTSTTTTTTITTPNTTRQNAASATTPLPQVDEADEKELSGAEEEKEVEKALLKPLLSLEDLVRFSSLEGSGGESLRQLLQRGQDTGAAEWSSFEHANIGPYIQKMLAAASPFNKGLESQDYRIPEVMRRLMCEDKKLCKEANVNGDQVQHIHQVSLQHRLPQSGQRAPMTNDDFNPAIEEEASDSGQGRPILKIPSYKPASSTTPGPSKNGAEPNAAATAFAQSFAAAAAAAANAVAGSPGLLERASPAFSGTSSPTNSLVGKGMAVNFRDVIAKSISVKFQEGQQPTGMPGQGGQSGQSMISEPNPYKRGRYTPPQQSQQGGGQQSAHQQSQQSKSSAAQQQAQQDKNQNKSGAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKAKEPTAAGAAIRTTPAATPEKKPLLKPQKPFTPAAGAGGMPAPNGLKMPPFMEGMPMPFGHPFNFWGPAPFMPSPFIPGGPNVPGILPEQYFASQRMRGLQEQQRNAIVQQQQRDGATAEQPGTSNSRGASLIKSPREMAESLYDGTAANGSFLDNLIRSSLEPGAARGNASSQQAAQQQPENLGGSKVLIDQLCRNSRRTPLPRAMQQDSSEDEAPPTGYKAARPLPERPERVPTVDLSPSPSERARATDEGSDRGLASPPTPLSLSRLSGSGREDETTRDSRSSREREVQNGGGSDKSEERHDSSTKKLNHYPDIHNLYAVSTDKKSACDSKLIVDHSSQKTQQHKDNFAAAAGAAVGLASQLQRSGYNNTNSSSSSSPAAAGNGHTRPTTPCNNQSSSERADSPQEQVSSPQPPSPQLAPMEETVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -