Basic Information

Gene Symbol
Arid4b
Assembly
GCA_900474235.1
Location
UCQR01037468.1:592-9148[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-28 8.5e-25 87.5 0.2 1 89 307 394 307 394 0.95
2 2 4 1.3e+04 -2.8 0.0 44 68 1465 1487 1432 1497 0.67

Sequence Information

Coding Sequence
ATGTTGGGGGACGATCCGCCTTACCTATCGGTGGGCACCGAGGTCAGTGCCAAATATAAGGGGGCCTTCTGCGAGGCTAAGATCAGGAAGGTTGTGCGCAGCGTCAAGTGTAGAGTGACATATAAGCAGGGCTTGGGCACGGCCACTGTTACTGATGACCAGATCAAGGGAACGCTCAGAGTTGGCGCCTCTGTCGAGGCCAGACACAATGATAGAAAGGACTTTGTAGAGGCTACTATTACAAAGATACAAGACTGCAGTCAGTACACGGTTGTGTTTGATGATGGGGATATAACTACGCTGAGGAGGACAGCTTTGTGTCTGAAAAGTGGTAGACATTTTGCTGAGAGTGAAACTTTGGACCAGTTACCTTTGACGCATCCGGAACACTTTGGCAATCCTGTTATTGGTGGGAGACGTGGCCGGAGATCTAGACAAACTCAAGATGACAGCAGTGACGATGAAGATGATGCACCAAGAGGTAGTAATGACTCAGGCTCGGGTTCTGGAGGGAAAGAAGGTTCAGAGACAGAACCTGAGATTGGAAGGGTGGTTTGTGTGGAACTTGGtgacaaaaagaagaaagacaATTGGTTCCCTGGACTGGTTGTTGCCCCTACTGCGCAGGACACTGTTAGAATAAGAGTTCGCGATGACTACCTTGTGAGGTCATTCAAGGATGCTAGATATTATACAGTGCCGAAAAAGGAAGCCACTGAATTTACCAAAGAGCTGGTCAATAAAGTGGAAAACAGCGCTTTAAAAGTAGCTGTGGAAAAGgctttactatttttagaaaagaaTGAGTTGCCTCCTCACTGGGACAGGGATTCATTATTTGGAAACTCAGTATCAAGTGGAAATAGTGATTCAGATGGAGAGCTTGACACAGATagttCTGATGATGAACCACGTGAAGAGAAAGACCACTTTGTGGCACAGCTGTATAAATTTATGGATGACCGAGGCACACCCATAAACAATTGCCCGATGATTGGCAACGAGGACATCGATCTCTATAGGTTGTTCCGCGCAGTATACAAGCTCGGCGGTTATAATCGCGTCACCAACCAGAACCAATGGAAACTAATAACTCGGCGACTGAGTTTCTCTATGCAAAACAATTCCTCAACGCACAACTTGGTTAAACAAGCTTACAAGAAATTCTTGCATTCCTTTGAAGACTTTTATAGGAAATTGGGCTGCACGATGGTGAACCATCCAAGGGGTAGTATGCGAAAGCAACGTCCAGGACGTAGCTTGATTCGCGATAAAGACAGAAATACACCTGTACCAACACAAGATAAGCTGGTGATTAAGACGgaaaaggaggaggaagagaaagagctgaAGAAAAGCAGCAGTGTAGTGCCCGACGAggaagttaaaaaagaaaagcgcgaAATCAAAAAAGAGCCTGTGGTAAAGGAGGAAGAGGTACCGGCTAAGGTCAAACGGAAAGAAGAACCAGCGGAGGAAAGCGTGAGCGGTCAAGAGAGCGATATCAACAATGAAGGTGAAGAAGAGTCTTCTAGCAGCGAAAAGTCCCAGAAGTCGAGTACGTCGAGACTTACTCCTTCTTCTAATGTCAGCAGTAAATCCAAAACTGCAGCCGCGGTAGCTGCTACTAGTACAACAGCCAAGAGTAAAGAAGAGGCAGCTAAGAAGAAGTCCGTgccagagaagaaaaagccaGAAGCAAAGaaacaagaaaagaaagatgAGAAGACCAAGGAAGAGGACAGCACCAAGACAAGGTCCAAATCTAAGGAAGATGTGGTGAAGGGCAGCAAACCGAACTCTTCGGAGGCAAGAGAGACGAGAGCACCTTCCCGAGAATCTGACAAGAAAGCATTTAATAAGCAGAGGAGGATGACCGACGAGGAGTTGAAGAAACGAGgcaggaagaagaaagaggtTGAGGGTGAAAAAGGCAGAGCTCCAGAGGAACGATCAGTTGAATACGCACCGAGTTACAAGGGACCTGTAGAAATCGGCGATAGACTAAAGGTTTACTATGGTCCAACCCATGAGTCCAAAGTCACTTACGAAGCTAAGGTTATTGACATGGAGAAGGATGGCACAGAAGCCGTGTATTTAGTCCACTACACTGGCTGGAACACCAGATACGACGAATGGATCAAATGTTCGAGAATAGCGCAAAATTTCACGCAAACCCAAGGTCGCGTTAAACGAACCAAGACAACGCCACGACCGCAAACTCCGAGTGCGAACTCTTCGTCCATGAATAAGTCTTCCAAAGGCGCACCAAATGCGGGAACCGGTGCTGCATCAACGGCGAGTGCGCAACATCGTCGACGGGCGCAGGGCGATGCACCTACGGGTAGCAGTTCCTCGTCTATCGGTAACAAGGACTCTCGCAAAGACGATCGCGAAGGTACACCGGCCACGCGCTCCACTACTCCCTCACCCCTTACCTCGTGCACTTCGCGGACTAAGAGCCCCGCAACAACGGCGAACAACAGAACGACGCGCGTAACGCGTAACGCAGACTTTTTGTCATTGGCTAATGAACTTGGCAGACGTACCAGGAGAACGTCGGGTCATGCGGATGCGATGGTTGCCGAAGAATCAGATAGCGAAGATTCGGATTCTATGGAGTCCGAAACGAGTGCGGAGCCCGAAACAACGCAAGAAAGAAATCGCAGAGAGGCCAGGCGAAGAGCTGAAAGTCGTATGAAGATTGAGGAAACAAGCGACGCCGAAGCAGAGAAGGACGTGGACATTAGCAGACGGGGACGAAGGCTTAGAAAAACCATCGGAAAGCTGCAGGAAGTCAAGTCGGAGCCCGAATCAGATGAAGAGCAACCTAAAGGCAGGGATTTTGATCTAAATCAAATCAGGTCGGAGCTCAAAGGCTTCGATAAAGCAGTCAAACTTGAGATGACAAGTGTCGAGCCGGaccaagaagaagaacagGAGGAGCAGACATCAAGCCCCGTGAAGCAGGAAAAAATGGAAACAGAAAGTCTATCTGATAAGAAGGTCGTCCCGGAGCCCGACAAGAAGCGCGAAACACCAAAGGTTGAACCACAGAACGCAATACCAATCAAACGAGAACCTATTAAAGTCGAAGCCAACCAATCCGAGAGTACCGAAGacatttatgaatttaaagaACCTGAACCTTTTGAATTCGAAGTGCGTAACAAAAGAGATTCGGGTGGCAGCACTGGCAGTACCACGGATaaggatagagagaaagagaaagagaaggacaATAAGGAGAAGCCAAAAAAGCGCACATTCGAGGAAGACAAGAGTCCGAAGAAGCGCCAGAAGACtcctgctgctactactaaAAGCAACGACAGTAAGACTGAGACTTCTGCACAAGAGATCAGTGACAGCAAGAAGAAAGTacgtaaaatattcaataagcAAGCGGACGAaaacgacgacgtcgacgaaaCCGCGCCAGGTAAAGAACTCGTCAAATCCTTTCCGAATAACAGCAGTTCTAAGGCTCCGTCTCGCAAGGACGATGTGGATGAAAGTTCAATAGCCGATAGCGTTAGTAGCAAAGAAAAACCGAAGAAGGCTGTGGATGAGGATGCGTCAAAAAATCCAAAGAAAAGACAAAAGACTTACAGGGGTGTTGGGGGAACTCCAGGCGCTGTGATAACTGATAATAACGTCGACGTCCCTAGCATGACGAGTACAACTACTAGGGATCACGCTACTAAGTATTTCTCACATTATTCCGGACCTAAGACGAAAACTGCTGCGATCGCCAGCGAAAACGAGAGCGCACAAGATCGTCTGGCTACTACTTCAAAGTCCGATATGCAAATTCCGTCGACTTCAAGTTCTGTTGATAATAAACAAGCATCGACGAATAGTGACAAGAAACGAGTCCCGGATTCCAGTGCACCTGGTAAAGCTGAGCCCAAGGAGCAGATGAAAACATTGGATTTCACACCAATCGTTCCGCACACACTACCTGTACCCGCGCCTATTAGCACTCGGTTACCGGCTACCGCCAGCATCGAAGAAAAACTCTCGGCTGCGGCGGTTTTCCGCAGCAAACTTAAGGATACAAAGAAGGACGATGACTTAGACAGCACGTCTAGAAAAACTCTAAAGGATGTGACTAAAAAAGCCGAAACGCTGTCTGCCAAAAAGGccaaagaaaaggaagaaagtaAAGCAAAGCATGAGCccgagaagaagaaacagcAGATAATCGAACCGAATATTCCGAAGAAGGATCCCTTACAAGAAATCGAGATTCGTAAGGATCCTCTGCTCGaggtaataaagaaaaaggaggaCGAAATTCTTAAGATCAAGAAGGAACCGGAGACAAAGAAGACTCCAGTTCCCATGTCAAACACGACCGTCACCAAGACTTACGGCAGCCAGAGAAAGGATACGGCGACGAAAGTCGAGGAGACTTGGAAGAAGAGTGCTGCGGCTCTCACGGCTTCAACGACGGCGTGTAATTCCAATGTAAACGCATCAAGTGATTTGCCGAACAGCGACTCGGTCAAGGATTATGTCGTTGTGCGCAAAGAGACAATAGTAAGTAAAATCAAATCAAGCATAGACCGAGACTCGGTAGACTCGACAGATAGCAGTGATAGCGAAAGGCGGCTCACCATTATAGATAGTGAGGACTTCCCCGAGGAGAAGTGCAATGATTCCAGCTCCGACGTCAAGAGCAAGACTGCACCGATTGCAGTGGCTAGTAGCCAGTTTAATGCCATAACGCAACAGCAACGAGCAACTTCGGTAGTGCCTTCTCATATCGAGATACACCAGCAGATCAGGGGTGTTGGAGGAACTCCGGGTGTGGCTGTGATTATTGAGAAGAGTACCAAAATGGAGGAGGACGGAGAAAATTTGAACTCACTGCTGTGCGAAGAAGAGATACCAGGCTCACCAACGCCTGGTTTGGAATCCATGGACCATGAGCACAAAGCTAGCAGCTCGCAGAATCTCGCCAAGTCTGATATGGGAAGTAAAATGGCCGTAGCATTTGTGGCAGCTCAATTGCCGATAAGCACATTACCGTCGTCGACTCAGATGACTAATTGTGCTATGGTGACTACTATGAGTGGCGGTGTGCCTGTTCCCCAAAGTACAAACAATCTCGTTACCGTATCTATGACTGTTCAACACGCCAGCATTCAACCACTCAGGCAAGCACAACCTCACCCTCAACCGTTGCCTCAGCCACAGCATCAAGCGCAACACCAAGTTCAGCCGCAGGCACAATCAGTAGCACAAGGTCAACATCAGCAaccgcatcatcatcaccagccacaacaacagcagccgcaacaacaacaacaacaacaacaacagcagcaacaacagcaacagcaccAGCCGCAACCACAACGTCATGATCAGCATCATCCTGCGCCAATGTTAGTAGCCGTGCAGCGTCGAGAGAGTAATGAAGCCGCTCCTGTTATGGACAATACGCCCCCAACTACACCCGACTCAAGTATTTCCAACATATCAGGTTCGCCACGTGACGAGCGCACTGGTGGATCAACACCTTCCTCTTCCGAAGACAATTCTAAGCTTAACCGCGACAGCTCCGAGGCAGAGAATGATAGCGGAGGTAAGGGCAGTGGCCCGAGCGAAGACGATGGTTCGTCGCTCGTCAATTCAGAGCACGGCGGCAACGGCGGTGCTACCTCGTCGTCCTCTGACCGAATACCTAAACCACCAGCGAAGCGAGCCATGAACGACGGTGAAAACGTATCACCGAAGAAGcgtaagaaaagaaaagatcaGGACGGTGGTATGTCCACTAATCAAGCAAACATTGGCAATACTTCGGGTAAGAGGTCACCAAGGCAGAGTGCGCGCAACGCAAGGCATGGAACGGCAAGTGACAGTGATGATACCAGCGAAGGCTCAAACCAGTGCATTAATAACTCAACACAAGGGAACGCTAATTTGACGAGGTCCGAAGCATCGCCAAGTGCAGCGAGAAATATGATGAACGATCGATCATCCACGGATGTCAGCATGTACATGAAACCACCTAGCACTACTAAGTACAACTTTATCGTTGACCTCGacCCGACCTTGGACGGAACACAGAGGATAGCGATTTTACAACAGAAGATGTCAGAATTGCGAAAAACGTATATGTCCGTCAAAGTAGAACTCGCTGGCATTGAGAGACGTCGCAAGAAGTTAAAgcgaagagagcgagaagCACAAAAAGCTGCAAAGGCTGAAATGCAACAGGCGTGTTCGTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDDQIKGTLRVGASVEARHNDRKDFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQTQDDSSDDEDDAPRGSNDSGSGSGGKEGSETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSALKVAVEKALLFLEKNELPPHWDRDSLFGNSVSSGNSDSDGELDTDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLSFSMQNNSSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSMRKQRPGRSLIRDKDRNTPVPTQDKLVIKTEKEEEEKELKKSSSVVPDEEVKKEKREIKKEPVVKEEEVPAKVKRKEEPAEESVSGQESDINNEGEEESSSSEKSQKSSTSRLTPSSNVSSKSKTAAAVAATSTTAKSKEEAAKKKSVPEKKKPEAKKQEKKDEKTKEEDSTKTRSKSKEDVVKGSKPNSSEARETRAPSRESDKKAFNKQRRMTDEELKKRGRKKKEVEGEKGRAPEERSVEYAPSYKGPVEIGDRLKVYYGPTHESKVTYEAKVIDMEKDGTEAVYLVHYTGWNTRYDEWIKCSRIAQNFTQTQGRVKRTKTTPRPQTPSANSSSMNKSSKGAPNAGTGAASTASAQHRRRAQGDAPTGSSSSSIGNKDSRKDDREGTPATRSTTPSPLTSCTSRTKSPATTANNRTTRVTRNADFLSLANELGRRTRRTSGHADAMVAEESDSEDSDSMESETSAEPETTQERNRREARRRAESRMKIEETSDAEAEKDVDISRRGRRLRKTIGKLQEVKSEPESDEEQPKGRDFDLNQIRSELKGFDKAVKLEMTSVEPDQEEEQEEQTSSPVKQEKMETESLSDKKVVPEPDKKRETPKVEPQNAIPIKREPIKVEANQSESTEDIYEFKEPEPFEFEVRNKRDSGGSTGSTTDKDREKEKEKDNKEKPKKRTFEEDKSPKKRQKTPAATTKSNDSKTETSAQEISDSKKKVRKIFNKQADENDDVDETAPGKELVKSFPNNSSSKAPSRKDDVDESSIADSVSSKEKPKKAVDEDASKNPKKRQKTYRGVGGTPGAVITDNNVDVPSMTSTTTRDHATKYFSHYSGPKTKTAAIASENESAQDRLATTSKSDMQIPSTSSSVDNKQASTNSDKKRVPDSSAPGKAEPKEQMKTLDFTPIVPHTLPVPAPISTRLPATASIEEKLSAAAVFRSKLKDTKKDDDLDSTSRKTLKDVTKKAETLSAKKAKEKEESKAKHEPEKKKQQIIEPNIPKKDPLQEIEIRKDPLLEVIKKKEDEILKIKKEPETKKTPVPMSNTTVTKTYGSQRKDTATKVEETWKKSAAALTASTTACNSNVNASSDLPNSDSVKDYVVVRKETIVSKIKSSIDRDSVDSTDSSDSERRLTIIDSEDFPEEKCNDSSSDVKSKTAPIAVASSQFNAITQQQRATSVVPSHIEIHQQIRGVGGTPGVAVIIEKSTKMEEDGENLNSLLCEEEIPGSPTPGLESMDHEHKASSSQNLAKSDMGSKMAVAFVAAQLPISTLPSSTQMTNCAMVTTMSGGVPVPQSTNNLVTVSMTVQHASIQPLRQAQPHPQPLPQPQHQAQHQVQPQAQSVAQGQHQQPHHHHQPQQQQPQQQQQQQQQQQQQQQHQPQPQRHDQHHPAPMLVAVQRRESNEAAPVMDNTPPTTPDSSISNISGSPRDERTGGSTPSSSEDNSKLNRDSSEAENDSGGKGSGPSEDDGSSLVNSEHGGNGGATSSSSDRIPKPPAKRAMNDGENVSPKKRKKRKDQDGGMSTNQANIGNTSGKRSPRQSARNARHGTASDSDDTSEGSNQCINNSTQGNANLTRSEASPSAARNMMNDRSSTDVSMYMKPPSTTKYNFIVDLDPTLDGTQRIAILQQKMSELRKTYMSVKVELAGIERRRKKLKRREREAQKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01486898;
90% Identity
-
80% Identity
-