Cfun013799.1
Basic Information
- Insect
- Cecidostiba fungosa
- Gene Symbol
- -
- Assembly
- GCA_900474305.1
- Location
- UCOJ01000119.1:186656-196590[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.8e-05 0.0016 18.9 1.9 1 21 125 145 125 146 0.95 2 19 0.15 13 6.6 0.2 1 21 352 372 352 373 0.94 3 19 3.3e-05 0.0028 18.1 1.3 1 22 420 441 420 441 0.96 4 19 0.0029 0.25 12.0 0.5 2 19 484 501 483 503 0.95 5 19 0.018 1.5 9.5 3.4 1 23 510 533 510 533 0.98 6 19 0.23 19 6.0 1.0 1 23 613 636 613 636 0.97 7 19 0.0055 0.46 11.1 2.1 1 22 641 662 641 662 0.94 8 19 0.003 0.25 12.0 4.5 1 23 669 692 669 692 0.96 9 19 0.0003 0.025 15.1 0.3 1 21 699 719 699 720 0.95 10 19 0.0034 0.29 11.8 1.1 1 23 1156 1179 1156 1179 0.97 11 19 0.43 37 5.2 0.6 1 11 1212 1222 1212 1225 0.92 12 19 0.092 7.8 7.3 0.4 2 23 1241 1263 1240 1263 0.94 13 19 0.00077 0.065 13.8 0.3 1 23 1331 1356 1331 1356 0.97 14 19 0.017 1.4 9.6 0.4 1 21 1363 1383 1363 1384 0.96 15 19 2.4e-05 0.002 18.5 0.6 1 21 1396 1416 1396 1417 0.95 16 19 0.0015 0.13 12.9 1.3 2 21 1430 1449 1429 1450 0.93 17 19 5.8e-05 0.0049 17.4 0.2 1 20 1475 1494 1475 1496 0.93 18 19 5.4 4.5e+02 1.7 6.5 1 21 1505 1525 1505 1528 0.95 19 19 2.1 1.8e+02 3.0 0.1 2 20 1538 1556 1537 1558 0.92
Sequence Information
- Coding Sequence
- ATGCTTTCTGACCTGGAATATTCCGCTGACGAATCGGAAATCAAAAGTTACGATCACGAGAAAAGGAAGAGCAGTGGTGATCTGGTAGTTGGAAATCCTTGTGAAAATCAAAAGACGACGTGGGCAGGTTTAATTAAACTACctactttgaaaaatgatgacaTAGAtctagACCTAGTCGTTACTAAGTTCGGCAAAGCCAACTGCGCCAAATGCCGTAAACAATTCAAAGCAGTGCCGCGTCAGATTCGCTGCAAGCTCTGCTCCAGATCCTACGTCTACAAATGCTCGACCTGTCTCGACTCCACCTACAAGACCTTCACCGACCTGTGCCATCACCTCAAGATCAAGCACACGACCCTCCGGGAGCTTTACACTTGCTCCACATGTAAGAAAAGCTTCAATCAGCCGAAACATCTGACACAACACGTCAAGGTTTGCGGATCAACACCAAACTTCAAATGCGAGCTTTGTTCGTACAAAGCTAGGTATAAGTGCAACCTGctGTGTAGACGAATAACGCTTCAAGAAAAAATGGATATCGACGTAGATAATACTTTGCCGCTAACAAACAACGGAcctaataacaataacaaagaaTCATTTTGCTTGCAAGAGGAGATCATAGATTTACACGAATCGGAAGGTTCAGacaTTGAAATAGTTGCAGTAAGTAAAAGCGTCGCCGAaggaagaacaaaaaataaactgaaagAATTCATACGAAGTCGGCGAAGGACTAAAATTTACGTCAACTCGGTGAATTCGACTTCTGCAAGAAATCAAGACTCGTACATcaaagaagaaattataatttctgaCGCGTCTGAATCGGATGACGATAGCCCAAACCAATCAAAAACCTTTAACACTAGATCAATAGATCGATGTAACTTTAAAGGCCTACAAAACACGCCGAAAAGAAAAGTTCCTAATCCAAACgAATCCTTGAGCTCCATCATTTTGAATTGTCCACGATGCAACATAACGAAAACAGTATTTTCCACGACTTTAGGAAATATTACATGCAAAGAGTGCAATGTCAATATGTCATACGTCTGCAATAAGTGCAATCTTCCATACCCGACGATGCTCGCATTGTACAGACACAAAAAATTGCAGTGCGAAACGACCGTCAAAACCAAAATCTTGCAACCGAAGAACATGTTCATTCTAAAATGTTCGAAATGCAATCTATCCCAGAAGATTCAGAGGATAAAGCTGAGCAGATGCCTTACCTGCCGCATCGACATGCCCTACGAGTGTATGGTATGCAGCAAGACCTTCAATACATACTCCAATTTGTATTCCCACATGAAACGTCGTTGTCAGCCGAAGCGCCGTACATATTACTGCAACGAGTGCAGCTTCGAATGCACATGCGAATCCATACTCGTACGACATCTCAACAACCAGCATCCGGGACTCTTTCTCTTCGATAACTCGGTGCAGTGCTGCGTATGCAACCAGAGTTTCAAGAATGTCGCGGAACTCAAGCGTCACGAGATTGGATGCGGCGCGTCGTCCTATCAGTGTAAATTTTGCACCTACAAGCCTAAGTATCaggagaatttgaaaaaacacCTGCTCACGCGCCATGCTGATAAAGTCCGCAGTGAGGATATCCAGGACGTTCTTAGAGAGTCGGCTTATCTGCCCAAAACTCTCAAGAAACAGAAAGGGAAAGTTGAAGCCGTCATTCGTGCAAAAGTTGTCGATGAACCGAAAGAAATCAACAAAACAGCTTCGAAGACCGTATACTGTTTGAAATGTGACTTGGATTCGGAGTACACAAAGGGCTTACGTTATTGTCCCACCTGCAAATCGAGCTTCCGTTATCGCTGCAACGAATGCAACGGCATATACCAAGGCCTACCGTCACTCTACCGACATATCCATAGACAACACGGAAATATGCATTACAAATGCGAAAACTGTGGAAGGTGTTTCTCCTTCTTCGGCGATGCCAACGAGCATCGCAAGACCTGTGGCAAAGCGCCCCGTTTCGAGTGCAAGATATGCTTCTTTAAGACAAGATACAAATACAACTTGAGAAACCACATGTTCAAACTACACGACGAGAACCGCCAAAGTTTCGTGTGCCAGGACTGCGGTGCACAGTACAAGACGGAAAGGACGCTGACAAAGCACATGGAAAAATGCGAAAGACGCATAATTAGAATGACGTTGGACCAAAGGTCCAACATCTTCTCACTCTGCACTATGAGTAAAAAGATGCCTAATATTCTTAAGAGgcgtgagagaaaaaaagGTACAGCAATTGCAGAATCATCAAATACAACTACTTTAAAgataaatagtaaaattaatgttatagTATTAGAAGTTATTCCAGATGAAGTACTTCATGACAACCAAGATCTTTCAAATAAAGATATATGGAAATGTTCATCGGATGATTCGgATATTGAAGTAATATCTAGCTCAATCAAACCCAAGAAAAATACTACAAAAACTGTTAAAACTAAATCAAAATCATTACTTAAGCAAtcacaaacaaaattaaagaGAATTATACCAGTTGCTGAGCAAAATAAATCTCTTCGAATGCTAAGCAATCATACTGtttcaaaagataaaataacTGACGATGCAACTGGAATTTCATTTGAAGATCTATTAGATTTGTCAGagtataataaattccCAAGtgtcaatgaaaatttaaaaagtaatggaaatgaaaatgtgtacagtaaaaaagataaagatacCTCAAGGGATGTTTTTCAACTTGGTGATGAAATAAGTTATGAACTTGAATctgacaaTATAGCTGTTATTACATTACaatcaataaacaaaactAAATCAAATACAATGCTTAAATACTCCCAAAATAAATCTAAAGTAACTAAGCAGTCTAACACTCATATAATGTTAAGTAATAATATGGATTTAAAAGACCAAATGACTAATGATGAAACTGGAATTTCATTTGATATAAgtgatgaaaaatttccgtataataatgacgatttcaataatgatgaaaatgcatgttataaaaaagttgaagaTACCCCAAAAAATTGTCTTCCACTTAATGAAGATTATGTGGATGCTGTTACATCTCaatcaagagagaaaagtttggttgataaaaatgataaaactaAACTTGCCACTTTAAGTGCAAACAGTGTAGGTAATGAAACAGATATTCCTGAAACTGATGGTCTATCAGATGATTCAAATAGCATTTCAAATTCTGATGGCAATGAAAAAGGGTTTGTGGACTCATTACCTCCTAAAGATGATCcatctataattaataatgcacccctaaatataaaaagtgctGGTGATACTTTTTTATCTACGGATGATACTGAAACATTGAATTCACTTGTCAGGTTGAAATGTACAAATTGCTTAGCTTTGGTGCAGTGTCCTAAAGTAGAGCCACAAATGGAGTGTCAGAAATGTTGCATGAAATATCAATATCAATGCAAAATATGCACATCAGGTTTTGTTTCGTTATATTCGCTTTATACCCACCTCATAAAGTTTCATAGTCGTGGTGAAGCTGTGCATAGTATAATGATAAGGCCACAGTATATCAAAAAGCCTAGGAAGATTAGAAAACTGAAATGTGATTCTACAGAACTTTATAATTGTCAAAAATGCGGTACGAGTTTTAAATTAGAAACAATTAAGAATAAGCATGAGGCTATTTGCTCCAGAAATCCAAAGCTCAATTGCCCattttgctctctcgcgatgagcttcaaaaaaaatcttaaggAACATATAATCAAGCTTCACTCAGAATCATTTGATGTAAATGAAGTGGATAGTATTATTAATCAGATCGTTAAGgacggaaataaaaaaagaagagatgaGAAAGTAACGAGCCTCCTTCAGATGCTGCAAGTGGCCTACTGCCACAAGTGCGATCGCCGCACACCAGTTCACGAACTGAACGGTGAAATGACCTGCGCGACCTGCGGCGACAACCTTGTCTTCACCTGCACCGACCCGCAGTGTTCTCAGACCTTCTCGACCGCGAAGGCACTCAgttcgcacgcgcgcatgcTGCACATCGAGAAGCGTGACCACTACCGCTGCGCCCAGTGCCTCTACGCCACGACGAGCAGCAAGGATTTGATAAAGCATCAGAAAAACTGCGGTGATCTGGTGATCCTGCCGCCACGTCTATTCGTCTGCCCAAATTGCGACAAGAGTTTTAAGAAAGAACGCTATCTGCGAGTTCACCTACAGCGCTCTAAAGCTTGTGCCCGCTATAAGCAGCGTGAGCTTGTCTGTCCGAAATGCAAGAGGACGTTCCGGATGCAGCGCTGGCTTGAGAATCATCGCTGCGAGCCCGTGGCGACGCCTTTGGAACCTCCGGAGCCAATGTCTCCCACAGAGCTCGTTCCACTTGAAGAGCCAGAATACCCTTGTCCTGATTGCGGTAAAGTCTTCAAACAGATGCGCTGGTTTAATGCCCATAAGGAGAAATACTGCGACAAGCAGCGAGTGGTTTATCGGTGTGCCCATTGCCACTACCAGGGcttcgaaaagaagaagctcaaAGTGCACATGAGGTGCGCTCACATACATATGTGCACTGGGAAGAAGCTGAGCTGCATGAAATGCGGCACTAAGTGGACGAGCATTTACGGTCTCAATAGACATCTGGACAATTGTAGCGGTGACTACGAAACCGAGAAGGTAAAgctgaggagaaaaaagaaaaagacctGGGGAGAGATGTTTGAATACGTTTGA
- Protein Sequence
- MLSDLEYSADESEIKSYDHEKRKSSGDLVVGNPCENQKTTWAGLIKLPTLKNDDIDLDLVVTKFGKANCAKCRKQFKAVPRQIRCKLCSRSYVYKCSTCLDSTYKTFTDLCHHLKIKHTTLRELYTCSTCKKSFNQPKHLTQHVKVCGSTPNFKCELCSYKARYKCNLLCRRITLQEKMDIDVDNTLPLTNNGPNNNNKESFCLQEEIIDLHESEGSDIEIVAVSKSVAEGRTKNKLKEFIRSRRRTKIYVNSVNSTSARNQDSYIKEEIIISDASESDDDSPNQSKTFNTRSIDRCNFKGLQNTPKRKVPNPNESLSSIILNCPRCNITKTVFSTTLGNITCKECNVNMSYVCNKCNLPYPTMLALYRHKKLQCETTVKTKILQPKNMFILKCSKCNLSQKIQRIKLSRCLTCRIDMPYECMVCSKTFNTYSNLYSHMKRRCQPKRRTYYCNECSFECTCESILVRHLNNQHPGLFLFDNSVQCCVCNQSFKNVAELKRHEIGCGASSYQCKFCTYKPKYQENLKKHLLTRHADKVRSEDIQDVLRESAYLPKTLKKQKGKVEAVIRAKVVDEPKEINKTASKTVYCLKCDLDSEYTKGLRYCPTCKSSFRYRCNECNGIYQGLPSLYRHIHRQHGNMHYKCENCGRCFSFFGDANEHRKTCGKAPRFECKICFFKTRYKYNLRNHMFKLHDENRQSFVCQDCGAQYKTERTLTKHMEKCERRIIRMTLDQRSNIFSLCTMSKKMPNILKRRERKKGTAIAESSNTTTLKINSKINVIVLEVIPDEVLHDNQDLSNKDIWKCSSDDSDIEVISSSIKPKKNTTKTVKTKSKSLLKQSQTKLKRIIPVAEQNKSLRMLSNHTVSKDKITDDATGISFEDLLDLSEYNKFPSVNENLKSNGNENVYSKKDKDTSRDVFQLGDEISYELESDNIAVITLQSINKTKSNTMLKYSQNKSKVTKQSNTHIMLSNNMDLKDQMTNDETGISFDISDEKFPYNNDDFNNDENACYKKVEDTPKNCLPLNEDYVDAVTSQSREKSLVDKNDKTKLATLSANSVGNETDIPETDGLSDDSNSISNSDGNEKGFVDSLPPKDDPSIINNAPLNIKSAGDTFLSTDDTETLNSLVRLKCTNCLALVQCPKVEPQMECQKCCMKYQYQCKICTSGFVSLYSLYTHLIKFHSRGEAVHSIMIRPQYIKKPRKIRKLKCDSTELYNCQKCGTSFKLETIKNKHEAICSRNPKLNCPFCSLAMSFKKNLKEHIIKLHSESFDVNEVDSIINQIVKDGNKKRRDEKVTSLLQMLQVAYCHKCDRRTPVHELNGEMTCATCGDNLVFTCTDPQCSQTFSTAKALSSHARMLHIEKRDHYRCAQCLYATTSSKDLIKHQKNCGDLVILPPRLFVCPNCDKSFKKERYLRVHLQRSKACARYKQRELVCPKCKRTFRMQRWLENHRCEPVATPLEPPEPMSPTELVPLEEPEYPCPDCGKVFKQMRWFNAHKEKYCDKQRVVYRCAHCHYQGFEKKKLKVHMRCAHIHMCTGKKLSCMKCGTKWTSIYGLNRHLDNCSGDYETEKVKLRRKKKKTWGEMFEYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -