Basic Information

Insect: Cecidostiba fungosa
Gene Symbol: salm
Assembly: GCA_900474305.1
Location: UCOJ01000046.1:8410-22653[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 5.7e-06 0.00048 20.5 0.9 1 23 466 488 466 488 0.98

2 9 1.1e-05 0.00096 19.6 2.1 1 23 494 516 494 516 0.98

3 9 0.67 57 4.6 1.8 3 23 965 985 964 985 0.92

4 9 4.9e-08 4.2e-06 27.0 0.6 1 23 991 1013 991 1013 0.97

5 9 0.0017 0.14 12.7 4.1 1 23 1023 1045 1023 1045 0.97

6 9 0.0024 0.2 12.3 1.9 2 23 1395 1416 1394 1416 0.97

7 9 0.041 3.4 8.4 1.3 1 14 1422 1435 1422 1436 0.92

8 9 1.2e-06 9.9e-05 22.7 2.1 3 23 1692 1712 1690 1712 0.96

9 9 1.6e-07 1.3e-05 25.4 0.7 1 23 1718 1740 1718 1740 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	5.7e-06	0.00048	20.5	0.9	1	23	466	488	466	488	0.98
2	9	1.1e-05	0.00096	19.6	2.1	1	23	494	516	494	516	0.98
3	9	0.67	57	4.6	1.8	3	23	965	985	964	985	0.92
4	9	4.9e-08	4.2e-06	27.0	0.6	1	23	991	1013	991	1013	0.97
5	9	0.0017	0.14	12.7	4.1	1	23	1023	1045	1023	1045	0.97
6	9	0.0024	0.2	12.3	1.9	2	23	1395	1416	1394	1416	0.97
7	9	0.041	3.4	8.4	1.3	1	14	1422	1435	1422	1436	0.92
8	9	1.2e-06	9.9e-05	22.7	2.1	3	23	1692	1712	1690	1712	0.96
9	9	1.6e-07	1.3e-05	25.4	0.7	1	23	1718	1740	1718	1740	0.98

Sequence Information

Coding Sequence: ATGCAGCTGATGCGCTGGAGCATCACGAGGAGGCTCGAGAGCCGCAGCGAGAAGCAGCGGCGAGAGGCGAGGATGTGCCAGCCGGACACGGCCGAGGCCAGGCTCTCCTATTCGCGTTGCTCCGGGGAAGACATTGACTCAGCAGCGTCGGACGGTGAGGAGAGCGCTGGAGGAGGCCCGGTCGGCGAGGAGGCGGTCGACCTCAGCTCGGCGCGCTCCCAGCACGGGGAGGACGACCTGGAGGAGCGCGGCGAGCCCGAAGAGCCCGCCGTGCCGGTCGAGCTTGCCGAGGACGAGGACATCGAGGAGCAGGACGAGcccgaggacgaggacgaggcCCAGCCCCAGGGCCAGCGCATCAAGAAGCTTCGCCAGGATCTCGCGCCCGGCaacgatgacgacgaggaggGCTCGCGCAAGCGCATGCGCCTCTGCCAGGACGCCGAGAACAACAACAGCTTCGTCGAGGGCGGCCCGGCCACGGGCGTCTTTCCGCCCGCGGGCACTAGTCACGTCACCCTCGAGGCCCTCCAGAACACCAAGGTCGCCGTGGCCCAGTTCGCGGCGACGGCCCTGGCCGGTGGCGCCGACAGCGAGGCGGCCCTCCAGGAGCTGGCCGTGCTCCAGAACACGCTCTACACCCTGCAGCACCAGCAGGTCTTCCAGCTCCAGCTGATCAGCCAgctccagcagcagctctcgataACGGCCCAGCAGGCACCGGCCCTCGCCGCTGGCCAGGAGGCGGCGAGCGGCGGCACTCCCGGACCCGACAGCAAGGAGGCCTCGCCCTCGCCGGCGGCCAGCGCGACGAGCACCGGCACCGGCGCCGCGGCCGCGACGGCCCTCATCCAGCCGAAGCCTCTGTCGTCGCTCACGTCCCCGGCGCACTCGCGGCCCCCGAGCCACCACCagttccagcagcagcagcagcaccagcagcagcagcagcagccctcgcCCTCGTCGACGCCCGTGGCCCTCTCGGGGGGACAGGAGCGGGGGGACGCGCCCTCGGGCAGCGCCTCGCCCCTCGGCTGCGCGGCCCCGTCGCTGGCCAGGAGCTCGAGCAGTCCGCtgaacggcggcggcggaggcggCAGCGGCACAGCCGGGATCACGCCCTCGCACCAGGTGCCCGCGCTCTGCTCCATCAGCTCGTCGCTCGCCTCGTCGATCATCACGAACAACGACCCGCTGCCGCTGCACGAGCCCAACACCCTGGAGATGCTGCAGAAGCGCGCCCAGGAGGTGCTGGACAACGCGAGCCAGGGCCTGCTGGCCAACAACCTCGCGGACGAGCTGGCCTTCCGCGGGGGCTCCGGGGGCAAGGGCTCGCGGCTCTCGCCGTACGACGGCAAGTCCGGGGGCGGCCGCAGCGAGCCCTTCTTCAAGCACCGCTGCCGCTACTGCGGCAAGGTTTTCGGCAGCGACTCGGCCCTGCAGATCCACATAAGATCGCACACAGGTGAGCGTCCCTTCAAGTGCAACGTCTGCGGCAGTCGCTTCACCACCAAGGGCAACCTCAAGGTCCACTTCCAGAGGCACCGCGACAAATTTCCCCACGTTAAGATGAATCCCAATCCCGTGCCCGAGCACCTCGACAAGTACCACCCGCACCTGCTCCAGCAGCTGGCCGCCTGCGGCCAGCGTCCCCTCGGCTCCCCGCCCCCGCCTCCGCCGCCCCTGCCCCCGCACAGCTCCTCGTCCGCCTCCTCCGGGGCCCTGACCAGTCCCGGCGCTCCCCAGCAGCccccgccgccaccgccgccgccctTCCACGCCGCGGCCTTCCTGCCCCCGCAGCCACCTCTGCCCCTCGGCCTCGCGCTGCCCGGCATGCCCGGAGCGCTCTACCGGTCGCCCCTGCTCAActccgcggctgcagcggccgccgccgccgccgcagcggcAGCCGCGGCAGCGGCCTCGCACCGCGACCTCTCCTCCGTCGACCAGGAGGGCCCGGCTGACCTGAGCAAGCCGCTCGGCACCGCGGCCGGCAGCCCGACCGCGCACTCGCCGGCCCACTCGCCCAACTCGCATCATTCCTACAACGAGCATtgccagaagcagcagctgatgCTGCAGGAGCAGCGCGACGAGCTCGTCAAGCAGGAGCAGCGCGAGCAGTCCTCGCCTGCCAGGGACCTCAGCCAtcatcaccagcagcagctgcagcgacaGCAGCGACAGGGCTCGGAGCCCGCCGAGGGCCTCACGCCGAAGAACGAGCCCGAGGACGCCGACGAGATGAACGAGGAGGAGGCCGAGGAGTACGAGCGCGGCTACCACCTGAACGCCTCGCCGGGAGCCGGCGGCGAGCTGCAGCCCAGCcagctgatgcagcagcagatgtACGAGGACTGCAGCATGGACAGCAAGCGCAGCGGCAGCCGGATCGACGGCGAGCCCGGGGACATGGAGCCCGAGGACGACATGGACGAGCAGCCGGAGAACCTGTCGCACCGCGCCAACCCCGCCTCCATGCTGCAGCAGTCGATGCAGGTCTACCCGGGCGCCTCgccggccagcagcagcagcgcgagcagCGGCAGCCTGCAGACCTCCTTCGCGAACATTCTCTTCCCGGGTCTGCCGCCTCATCCGCAACTCGCGCCTCACCAtcccaccaccgccgccgccaccgccgccgccgccgccgcatccTCGCAGCCCGGTAACCAGAATCCATCCTCCGCAGGGGCCCAGCAGGCTGCCGAGATGCTGGACCCGGCCCGCGACCCGGCCATCTACTCGAGCCTCCTGCCCAGGCCCGGCAGCAACGACAACTCCTGGGAGAGCCTCATCGAGATCACCAAGACCTCCGAGACGTCCAAGCTCCAGCAGCTCGTCGACAACATCGAGCACAAGCTCACCGACCCGAACCAGTGCATCATCTGCCAGCGGGTCCTCTCCTGCAAGAGCGCCCTCCAGATGCACTACAGGACGCACACCGGCGAGCGGCCCTTCAAGTGCAAGATCTGCGGCCGCGCCTTCACCACCAAGGGCAACCTCAAGACCCACATGGGCGTGCACAGGGCGAAGCCGCCCCTCCGGCTGCTCCACCAGTGCACCGTCTGCCACAAGAAGTTCGCCAACAGCTTCGTCCTCCAGCAGCACGTCAACCTCCACACCAACGACCCGACCGAGCTCACGCCCGAGCAGATCCGCGCGGCCGAGGTGCACGACTTTGCGCCCGGCTACCCGCACCACCCGCTGGCGGCGTTCCTGCCCCAGGGCTTTCCGCCCCTGCACCCGGCGGGCTTCCCCCTGGGCTTCCCCCCCACGGCCAGGCAGCACGCCCTCGAGAGACAGGCCGCCCTGGCCGACAACGACGTCGACTCCAAGGACTCGCTGCAGCtccagcaccagcagcagctccaccagcaccaccagcaccaccagcaccagctgcagctgcagcagctccacCATCAGCGCTACATGGAGGAGCACGGCGGAGGCGCCGGCGCCGACGACATGGACGACGcggaggacgaggaggaggaccGCCGGGAGGACGACGAGAGGTGCGAGGACGCTCGGGAGAGGCGGAGCAGCCTCGACGGCGACGAGGACAAGGACCAGCAGGAGCTCGAGCAGGAGCCGGAGCACAAGGACTCGCCGCACGTGCCCTCCTTCTCCACGTCCCTGGCGGCGCTCGAGAGCCAGGTGCGCACCATCACGACCATGGCCTCGGGCATGAGCCAGCCCCTGCCGGCCAAGTCGCCGTCCTCCTCGCTGCACCGGTACAACGGCAGCGAGAAGAGCAACAGCCCGCTCAGCAGCCACGCGGCCTCGGCGCCGCTCGACCTGACGCCCCGGGCCTCCTCGACGCCGGCCTCGGTCAGCTCGGCCCCGATCTCGCCGCCCGGCAGCgggccgccgcagcagcagcagcagcagcagcagcacacagcaGCGGCCGGCAATCCTGCACAGACGCACCACCCGCCCCATCCGTTCGGCATGTTCGCCGGACTGCTGCAGGCCGTCTCGACCTCGCCCACGGCCAGCCTCAACAGCAGCGTGCCCGGAGCTCCCGGCGCCAGCGCAGTCAGTCCAGGACCCGGCATCGGGCCGCTCGCCTCGCTGACGACTTCCGCCGTCAGGGCCGCGACCTCGACCTACAATCCGCTCGGTCTGGCGGTTGGCGGCTCGGCAGTGCGCGGCAACACCACATGCAACATCTGCTACAAAACGTTCGCGTGTAACTCGGCGCTGGAGATTCATTACCGGAGCCACACGAAGGAGCGACCTTTCAAGTGCACTATCTGCGACCGGGGCTTCTCCACGAAGCGGAGCGACGGGACGATGAAGCCAGTCGAAAAGTGCAATTGCGCGGAGCGCGCGAGGCGCAGCGCCCGCGAGAAGGCGCGCAGGAGACGGAGGGCCGAGGAGCGCCGTTTGAGCGGCCGAGGGCggaccggcggcggcggcgtagcagcagcagctgcgggCGGAGGGCCGACGCCGTCCTCCTACGCAGCCGCGCTCTACGGGCAGGACTCTATGCGcctgccaccgccgccgatGTCATCCGCCCTCGGACTGCTGGCTTCCGACCCCGTCTTCCTGGGCAACATGAAGCAGCACATGCTGACGCACAAGATCCGCGACATGCCGCATCACCTCTTCGGCGACGCGAAACCGCTCGGTagtcagcaacagcagcagcagcagcaacagtccCAACAACAGTCTCCGGTGCCTCCCCCACCACcgccgcaacagcagcagctcctgcCGACCAGCCAAGCGAGTCTTCACGAACacctgcagcaacagcagctgcaacagcaacaacatcagcagcagcagcagcaacagcagcagcagcagcagcgcgaacgATCGAGAAGCCCGGTGTCCGCGGACGAGTCAAACTtggcaccgccgccgccgcccccgccgccgcctccgATGCCGCCGGTGTCGCAGCCGCAGCAACAACCGATACCGCCTCCTTCGGCCCTGGACGCCGGTATGCCCTCCATCAAGAAGTCCGGCCTAACGGAGAGCGAGCTGCCCGCACCCAAGAGGCCGCCCAGCATGCCCAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCGTCCTCGGCGCTCCAGATTCACATGAGAACACACACCGGCGACAAGCCCTTCCAGTGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGCAATCTCAAGGTGCACATGGGAACTCACATGTGGACCAACGGGGCGTCGCGCCGCGGACGACGAATGTCATTGGACATACCGTCGCTCCCAATCACGCCCAAGGACTCGGAGTTCCTGCAGCGCAGGCCGGATCTCTTCTATCCGTACCTACCCGCGCCCTTCCTTAACGGAGTGCCGCAAAAGCTGAACGAGATCTCGGTGATCCAGGGCAGCAACGGCTTGCCTCTGCCTAGCCACCCTGTCGGTGCCAACAAGTACGCCGGTCTCTTCGGCTCGGTCTAcgcggcagcggcagccggCGGGGCCGGCTTCCCGGGTATCAACCATCACCACTACGGCGCtgacaagcagcagcagcagcaggctctCACTCCACCCATGAGCAACGGGCCGCTCGACATGATGGGACCCAAGTCCGCGGGCTCGCTGCTCTTCCAGCCGGGCCCGCGCACCACGACGCCGCCCTCGCCGGCACACTCGCCCGGAACACCGTCCTCCAACACGGCCAGCCAACATTCGGCGAGCCTGCCCTGGAGCAGCGCCGCCGAGGCCGCCATACGCCAGCACCATTACGAACGAGAGGCGGCCGTTGTCGCCGCAGCGGCAGCCGCGGCCGCGGCCGCGGCTGCCCAACGACCCGAGAGCGACGGCTCACCGCCCGCACAGGCGCCCTCGAGGCTACCACCGCCCACCGCCCCTCGAGGCGAGGGTCTGGCCGCCTAG
Protein Sequence: MQLMRWSITRRLESRSEKQRREARMCQPDTAEARLSYSRCSGEDIDSAASDGEESAGGGPVGEEAVDLSSARSQHGEDDLEERGEPEEPAVPVELAEDEDIEEQDEPEDEDEAQPQGQRIKKLRQDLAPGNDDDEEGSRKRMRLCQDAENNNSFVEGGPATGVFPPAGTSHVTLEALQNTKVAVAQFAATALAGGADSEAALQELAVLQNTLYTLQHQQVFQLQLISQLQQQLSITAQQAPALAAGQEAASGGTPGPDSKEASPSPAASATSTGTGAAAATALIQPKPLSSLTSPAHSRPPSHHQFQQQQQHQQQQQQPSPSSTPVALSGGQERGDAPSGSASPLGCAAPSLARSSSSPLNGGGGGGSGTAGITPSHQVPALCSISSSLASSIITNNDPLPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGSGGKGSRLSPYDGKSGGGRSEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHRDKFPHVKMNPNPVPEHLDKYHPHLLQQLAACGQRPLGSPPPPPPPLPPHSSSSASSGALTSPGAPQQPPPPPPPPFHAAAFLPPQPPLPLGLALPGMPGALYRSPLLNSAAAAAAAAAAAAAAAAASHRDLSSVDQEGPADLSKPLGTAAGSPTAHSPAHSPNSHHSYNEHCQKQQLMLQEQRDELVKQEQREQSSPARDLSHHHQQQLQRQQRQGSEPAEGLTPKNEPEDADEMNEEEAEEYERGYHLNASPGAGGELQPSQLMQQQMYEDCSMDSKRSGSRIDGEPGDMEPEDDMDEQPENLSHRANPASMLQQSMQVYPGASPASSSSASSGSLQTSFANILFPGLPPHPQLAPHHPTTAAATAAAAAASSQPGNQNPSSAGAQQAAEMLDPARDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCIICQRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRLLHQCTVCHKKFANSFVLQQHVNLHTNDPTELTPEQIRAAEVHDFAPGYPHHPLAAFLPQGFPPLHPAGFPLGFPPTARQHALERQAALADNDVDSKDSLQLQHQQQLHQHHQHHQHQLQLQQLHHQRYMEEHGGGAGADDMDDAEDEEEDRREDDERCEDARERRSSLDGDEDKDQQELEQEPEHKDSPHVPSFSTSLAALESQVRTITTMASGMSQPLPAKSPSSSLHRYNGSEKSNSPLSSHAASAPLDLTPRASSTPASVSSAPISPPGSGPPQQQQQQQQHTAAAGNPAQTHHPPHPFGMFAGLLQAVSTSPTASLNSSVPGAPGASAVSPGPGIGPLASLTTSAVRAATSTYNPLGLAVGGSAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKRSDGTMKPVEKCNCAERARRSAREKARRRRRAEERRLSGRGRTGGGGVAAAAAGGGPTPSSYAAALYGQDSMRLPPPPMSSALGLLASDPVFLGNMKQHMLTHKIRDMPHHLFGDAKPLGSQQQQQQQQQSQQQSPVPPPPPPQQQQLLPTSQASLHEHLQQQQLQQQQHQQQQQQQQQQQQRERSRSPVSADESNLAPPPPPPPPPPMPPVSQPQQQPIPPPSALDAGMPSIKKSGLTESELPAPKRPPSMPSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFQCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDIPSLPITPKDSEFLQRRPDLFYPYLPAPFLNGVPQKLNEISVIQGSNGLPLPSHPVGANKYAGLFGSVYAAAAAGGAGFPGINHHHYGADKQQQQQALTPPMSNGPLDMMGPKSAGSLLFQPGPRTTTPPSPAHSPGTPSSNTASQHSASLPWSSAAEAAIRQHHYEREAAVVAAAAAAAAAAAAQRPESDGSPPAQAPSRLPPPTAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01037276;
90% Identity: iTF_01037276; iTF_01036486; iTF_01035673;
80% Identity: -