Basic Information

Insect: Cecidostiba fungosa
Gene Symbol: -
Assembly: GCA_900474305.1
Location: UCOJ01000083.1:164436-167518[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0009 0.076 13.6 0.1 1 21 63 83 63 84 0.95

2 13 1.1e-06 9.1e-05 22.8 2.1 1 23 166 189 166 189 0.95

3 13 0.00029 0.025 15.1 3.6 2 23 196 218 195 218 0.95

4 13 2.9e-05 0.0024 18.3 4.0 1 21 225 245 225 246 0.95

5 13 1.3e-08 1.1e-06 28.8 1.8 1 23 257 279 257 279 0.98

6 13 2.5e-05 0.0021 18.5 0.8 2 23 289 310 288 310 0.97

7 13 0.014 1.2 9.8 0.4 2 23 317 338 316 338 0.96

8 13 1.3e-06 0.00011 22.5 2.5 1 23 344 366 344 366 0.99

9 13 1.5e-05 0.0013 19.2 2.6 1 23 372 394 372 394 0.95

10 13 9.4e-06 0.00079 19.8 1.4 1 23 400 423 400 423 0.94

11 13 1.3e-07 1.1e-05 25.7 1.1 1 23 429 451 429 451 0.98

12 13 3.3e-07 2.8e-05 24.4 3.6 1 23 457 479 457 479 0.98

13 13 6.5e-06 0.00055 20.3 0.9 2 23 486 508 485 508 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0009	0.076	13.6	0.1	1	21	63	83	63	84	0.95
2	13	1.1e-06	9.1e-05	22.8	2.1	1	23	166	189	166	189	0.95
3	13	0.00029	0.025	15.1	3.6	2	23	196	218	195	218	0.95
4	13	2.9e-05	0.0024	18.3	4.0	1	21	225	245	225	246	0.95
5	13	1.3e-08	1.1e-06	28.8	1.8	1	23	257	279	257	279	0.98
6	13	2.5e-05	0.0021	18.5	0.8	2	23	289	310	288	310	0.97
7	13	0.014	1.2	9.8	0.4	2	23	317	338	316	338	0.96
8	13	1.3e-06	0.00011	22.5	2.5	1	23	344	366	344	366	0.99
9	13	1.5e-05	0.0013	19.2	2.6	1	23	372	394	372	394	0.95
10	13	9.4e-06	0.00079	19.8	1.4	1	23	400	423	400	423	0.94
11	13	1.3e-07	1.1e-05	25.7	1.1	1	23	429	451	429	451	0.98
12	13	3.3e-07	2.8e-05	24.4	3.6	1	23	457	479	457	479	0.98
13	13	6.5e-06	0.00055	20.3	0.9	2	23	486	508	485	508	0.95

Sequence Information

Coding Sequence: ATGGGCGAAGTCATAGAAATCTTGAAAGTGGAAAACACTTATCTACAGCAGGATGGCATGACGGAAGTTGTTGTTGCTGACCTATTAGGCAAAAATGATACTGAtggttcttttattatacctgaGATAATAAACGCTGATGATgtgCTTGCACAAAATGgtcaaattatacaaattattggAGATTATGAGTGTGTTACTTGTCACCGTATTTTTCCAAGTGAAGATATGCTAAAAGAACATCTACAAGTATGTagagaagaagatgatgatgctgaTATTTTAGAGTTAGGTAGAATGGATGATATAGAATCAgaggaagaagatgaagacGATGAAAGTCAAGTTGATGATCCAGATTATAATGTTGATTCAAGTCCATCAGATTCTCACAGTTCtaagaacaataataaaaaaataccaattaAGCCAGTATCGGAAGGTCAATGTCACTGTTGTGCAGAAGATTTAAAAACAGCTCATTCTGGTGGTCCTTTCAAGTGCACTCATTGTGATATGTCATTTAAAAAGTCATCTTCTCTAGAAAGACATTTGGTAGTTGTTCACTGGGAATCAGATTCATGTACATGCAACGATTGTGGTTCAACttttcgagataaaaaagcTCTAGATAAACATCGCTATACAACACATGTGAAAACCAACAAAGTGTATAAATGTGATAAATGTGATACTTATTTCTCAAGAAGCTACCACTTAAATCGTCATAAACAGCAATCAGGATGTCATGGAGACACTACTAATAGCTTTTCATGCCAGgtTTGCAATAAAGTATTCACTCGTAAAGATAATTTAAGAGAACACTTGCGAACTCATGCTGGAATGCcacaaagaaagaagaaatcatGTCAACTATGtccaaaacaattttatactaATCAACAATTGATAATTCATCAACGTGTGCATACTGGAGAAAGACCAATAGAATGTGACCTGTGTCCTAAAACCTTCTTATCTACACTAGCAATGAAAAAACATCGTAGGGTCCATACTGGAGAGAAACCTTTTGAATGCAAATATTGTCAGAAAAAATTTGCAGCAAGAGAAACATTAAATCGTCATCAAAGAACTCATACAGGAGAAAAACCTCATATTTGCCAGTACTGTAACAAGTCTTTTATCCAAGCAGCTCAATTGAGAGCTCACATATTTCATCACACTGGAGAAAATGGATTTTATTGTGACATTTGTGGAAAAGCTTTTAATCGCAAAGCACGTCTTACCAATCACAAAAAATTTGTCCATGAAGGTGCAACCCCATTTAAATGTGAAACATGTGATAAAGCTTTTACACGAAAAGAGGATCTGTCCAAACACATAAATCTCCATGCTGGAATCAAACctcATAAATGTGACACTTGTGGAAAGTGTTTTGCTGCTAAGTCATCATTACAAGCTCACATGAACACTCATCGGCGAGAACCCCCACAGTCATGTGCTGAGTGTGGTAGAGCATTTATTCGTCAAGATTGTCTTATGCGTCATATACGTGCCAAACACAGGGATCTTTTAGAAGATGTATTGGGTGAAGCCGAAAAGAAGCATTTACAATTACAAATGTTTAATATTGCTTATATTGCTTctgagaaaatgaaaacaggAGAGACAAATATTATGTCAACAGATGAATTGATGAAAGCTATTACAGAACTTTTAACAATtcttattgaaaaagaaacactAGAAttatttgGTTGGTTGCAATCACCATTACAAGATGTATTGGAAGCTGTTATTCGGCGATGTGGACATGAACCCCTTACAGCAGATAGTGATTTATCATTGCCGGACCGATTGAGAGGAAAtgttaaacttttatttaatgcTGTCATAGAAGATGAAAATGTTAAATCACTTTTAACAACACAAACAGTTGATGAGGTGATTATGCATGTTCTTAAGATATCACAGACCAACAACAAGCTAAGTCACCAAGAAGCTgaagaataa
Protein Sequence: MGEVIEILKVENTYLQQDGMTEVVVADLLGKNDTDGSFIIPEIINADDVLAQNGQIIQIIGDYECVTCHRIFPSEDMLKEHLQVCREEDDDADILELGRMDDIESEEEDEDDESQVDDPDYNVDSSPSDSHSSKNNNKKIPIKPVSEGQCHCCAEDLKTAHSGGPFKCTHCDMSFKKSSSLERHLVVVHWESDSCTCNDCGSTFRDKKALDKHRYTTHVKTNKVYKCDKCDTYFSRSYHLNRHKQQSGCHGDTTNSFSCQVCNKVFTRKDNLREHLRTHAGMPQRKKKSCQLCPKQFYTNQQLIIHQRVHTGERPIECDLCPKTFLSTLAMKKHRRVHTGEKPFECKYCQKKFAARETLNRHQRTHTGEKPHICQYCNKSFIQAAQLRAHIFHHTGENGFYCDICGKAFNRKARLTNHKKFVHEGATPFKCETCDKAFTRKEDLSKHINLHAGIKPHKCDTCGKCFAAKSSLQAHMNTHRREPPQSCAECGRAFIRQDCLMRHIRAKHRDLLEDVLGEAEKKHLQLQMFNIAYIASEKMKTGETNIMSTDELMKAITELLTILIEKETLELFGWLQSPLQDVLEAVIRRCGHEPLTADSDLSLPDRLRGNVKLLFNAVIEDENVKSLLTTQTVDEVIMHVLKISQTNNKLSHQEAEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00691361;
90% Identity: iTF_00144034;
80% Identity: -