Cfun000802.1
Basic Information
- Insect
- Cecidostiba fungosa
- Gene Symbol
- ZFY
- Assembly
- GCA_900474305.1
- Location
- UCOJ01000826.1:35300-38780[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.0057 0.48 11.1 0.4 2 23 14 35 13 35 0.97 2 29 0.015 1.3 9.7 0.9 1 20 50 69 50 72 0.93 3 29 1.6 1.4e+02 3.4 2.9 2 23 79 101 78 101 0.93 4 29 1.2e-05 0.0011 19.5 1.2 2 23 107 128 106 128 0.96 5 29 1.7e-05 0.0014 19.0 1.5 1 23 132 154 132 154 0.98 6 29 7.5e-05 0.0063 17.0 1.6 3 23 162 182 161 182 0.97 7 29 7.9e-05 0.0067 16.9 0.6 1 23 188 210 188 210 0.98 8 29 0.13 11 6.8 4.7 1 23 219 241 219 241 0.96 9 29 0.021 1.8 9.3 1.9 2 23 248 268 247 268 0.96 10 29 0.00019 0.016 15.7 3.1 1 23 274 296 274 296 0.95 11 29 1.9e-06 0.00016 22.0 1.0 1 23 302 324 302 324 0.98 12 29 2e-06 0.00017 22.0 1.5 1 23 365 387 365 387 0.99 13 29 0.62 52 4.7 0.0 1 20 392 411 392 413 0.89 14 29 0.038 3.2 8.5 0.2 1 23 420 443 420 443 0.93 15 29 0.00011 0.0096 16.4 0.4 1 23 460 483 460 483 0.96 16 29 0.39 33 5.3 3.9 1 23 492 514 492 514 0.97 17 29 0.038 3.2 8.5 1.8 2 23 521 541 520 541 0.96 18 29 8.1e-05 0.0068 16.9 1.6 1 23 547 569 547 569 0.98 19 29 0.0067 0.57 10.9 0.8 1 14 575 588 575 589 0.91 20 29 0.0029 0.24 12.0 3.5 1 23 632 654 632 654 0.97 21 29 4.3e-05 0.0036 17.8 2.2 1 23 660 682 660 682 0.98 22 29 1.6e-07 1.4e-05 25.4 0.1 1 23 688 710 688 710 0.98 23 29 0.0012 0.1 13.2 2.5 3 23 718 739 717 739 0.96 24 29 6.3e-06 0.00053 20.4 1.4 1 23 744 766 744 766 0.97 25 29 1e-05 0.00088 19.7 1.5 1 23 775 797 775 797 0.98 26 29 3.4e-06 0.00028 21.2 1.0 1 23 803 825 803 825 0.97 27 29 5.9e-05 0.005 17.3 1.3 2 23 832 853 831 853 0.97 28 29 3.6e-06 0.0003 21.2 2.0 1 23 859 881 859 881 0.98 29 29 1.8e-05 0.0015 18.9 0.1 1 23 887 909 887 909 0.98
Sequence Information
- Coding Sequence
- ATGTTGAGATATAAAAATCGCGAGGATGAAACTAGCAAAACTTGCGACCTGTGTGACCAGATTTTTGCAACCGAATTGGCGATGATGAACCACCGCAGAAAGCACAAGCCAACGCTCGATCCTCATGGTCCATCAGCTTCTGCGTCTTATAAATGCGACAAATGCGAACTGAGGTTCTCCTCAAAGCTTCGTCTCGCACAGCATCGACCGTTGCACAAGAACCAAGTCCGAGTGCGCTGCAAGAAATGCCGCAAGTGGTGCAAGGACGACGAATCCTACAAAAGACATCTGGAAGAGCTTCACAATTCCCAACCAGTCGAGTGTGATATCTGTAAGCGCCACTTCAAGCAAAAATCCAACCTTATCCTGCATCTCGGTATGCACGACAAATCTTTCGTCTGCCACATCTGCGGTGCCAAGTACTCTACGGTTTTCCTGCTGCGACAACACATTCGTCGACATAACAAGGAGTTCCGTGAGTTCTGCGACGTGTGTCACAAGGGTTTCTATAACCGGGCTTCTCTAAAATTACATATGGTTACCCATACTGAAGAGAGATCTTACGTTTGTGAGATTTGCCAGTCGAGCTACCGCTCATTGAATTATCTGAGGATACACCAGCGTATACATAAAGATCCACAGACGAGGAAGAAGTACAAGTGCGAATTGTGTAACTTTGAGAGCTTTCACAAGAAGAGTCTCAAGATGCACGTAACGAAGCACACTGGAGATAACATGACTACCTGCGAAGTTTGTGCTAAGGTGATCACGAGGTTTCATTTGAAGAATCACATGAGATTGCACAGCGGAGAGAAACCGCATGTTTGCGAGTATTGTGGTAAGAGGTTCGCTATGAAAAAGAATCTCGTAGTTCACTGCAGGATTCACACGGGGGATAAGCCCTACAAGTGCCAGATTTGTGACAAGTCTTTCACGCAGATTAACTCCCTGAAAGCGCACTCGAAAGTTCATCAGAAGGAAGCGATCCTTGCATACCAAGAAGAACCGCCGCTAGTCCTGAAATCCAGCGTAAAATCCAATCTGATACCTCAAAGTTCCAATGCCATCACCCCAAAACGTCGACGGCAGCAGTTTGAGTGCGATTACTGTTCCAAGTTTTTTGCCACTAATCATGCACTGGCTCTCCATATCCGCACTCACACAAGGAAGAGCTACTTCTGCAATGTCTGCGGTCGACCCGAGGTCTCCGAGGAAACCCTTAGGGAACACCTGGATAAACAGCGCTGCAAGCTCAGCTTCAACTGTTCAGACTGCAAGAAGTGGTTCAGTACTGCTAAGGGCGTTAGAATTCATGCCGCACGCGTACATTATAAGAAACCAAagacgaataaaaagaagattcCCAAGAAAAGAAATTACTCGTGTCTGCTTTGCGGGAGAAAATACCGCTCAGAAGGTTATCTCAAGATTCATATGGTGAAGATACATGAGGATATTCCGCGGACAGAGTCCTATAACTGCGAGCACTGCAGCTTCACGACTCTTAACAAATATTTCTTGAAGAAACACGTTTTGATTCACACTGGTGATCATAAGACAACCTGCCATGTCTGTgggaaaaaaatgatcaagTCCTATTTATCTGAACACATGAGAATTCATACAGGAGAGAAACCGTATATCTGCTGCTATTGTGGAAAAATGTTTGGTGGGAGAAAGTACCTGATAGTACACGAGCGGACGCACACTGGGGAGAGGCCGTACCAGTGCCAGCTTTGTGATAAGACGTTCACGCAGGAGTCCTATCACGGGGAGAGAAATTCTCTGAGCCTAGACCAGATAAACAACGAAACAGACAAGGAAACAATTACTCTATATCTACCAGAAAAACTCGTCGATAGAGACAAAACTGACGCAGACGACCAAGAAGGCTACCAGTGTCAGCTCTGTTCGAAGTGTTTCAAATCCAAAAACCTCTACGACGGCCACCTGATATCCCACAGCGACGCTCGTCCTCATCAATGCGACATCTGCCTCAAGTCATTCAAACGCACCAACACCTTGGCGGTCCACCGTCGCATCCATACCCGCGAGCGGAACTTCGTCTGCGACGTCTGTGGTCGAGCTTTCGTCCAAGCCTCTCAACTAGCTACGCACCAGCGGCGGCACTTTGACCGGTTCACGCGACACTGCGCTCTCTGCGACAAGGGATTCTTTACCAACGCTGAGCTGCATAGCCATATGAACGTAAAACATGCAGCTAATCAACACGTCTGCGACGCTTGTGGAAAATCCTTTCCGAACAATCATTCGCTAGCCAGACATGCCAGAAGCCATGATCCGGATTTCGAACCGGCGAAGCATCAGTGCGAGTTCTGCGGCAAGACTTTCGCTTACCGAAACTCTCTGGTAGCGCATGTGAAATCCCACACCGGGGAGAACAAGTACGACTGCCATCTCTGCGGGAAAAGCGTGTCGTCGAAGGGATCACTGCAGGATCATCTCAGGCTACATGGTGGAGAGAAGAACTTGGTGTGCGACGTCTGCGGAAAGGCTTTTCACAAGAGGACGACACTCGTCGTGCACAAGAGGACACATACGGGCGAAAAACCTTACGTTTGCGAGACGTGCGACAAAGCTTTTACGCAACACTCAACGCTGGTGATACACCGCCGATATCACACGGGTCAAAGACCTTATCAGTGCGGCGTTTGCAACAAGAGTTTCGTGTCTAAAGCTCTGTTAAATGGACATGGCAAGGTTCACGCAAACCCGAGCACTTGA
- Protein Sequence
- MLRYKNREDETSKTCDLCDQIFATELAMMNHRRKHKPTLDPHGPSASASYKCDKCELRFSSKLRLAQHRPLHKNQVRVRCKKCRKWCKDDESYKRHLEELHNSQPVECDICKRHFKQKSNLILHLGMHDKSFVCHICGAKYSTVFLLRQHIRRHNKEFREFCDVCHKGFYNRASLKLHMVTHTEERSYVCEICQSSYRSLNYLRIHQRIHKDPQTRKKYKCELCNFESFHKKSLKMHVTKHTGDNMTTCEVCAKVITRFHLKNHMRLHSGEKPHVCEYCGKRFAMKKNLVVHCRIHTGDKPYKCQICDKSFTQINSLKAHSKVHQKEAILAYQEEPPLVLKSSVKSNLIPQSSNAITPKRRRQQFECDYCSKFFATNHALALHIRTHTRKSYFCNVCGRPEVSEETLREHLDKQRCKLSFNCSDCKKWFSTAKGVRIHAARVHYKKPKTNKKKIPKKRNYSCLLCGRKYRSEGYLKIHMVKIHEDIPRTESYNCEHCSFTTLNKYFLKKHVLIHTGDHKTTCHVCGKKMIKSYLSEHMRIHTGEKPYICCYCGKMFGGRKYLIVHERTHTGERPYQCQLCDKTFTQESYHGERNSLSLDQINNETDKETITLYLPEKLVDRDKTDADDQEGYQCQLCSKCFKSKNLYDGHLISHSDARPHQCDICLKSFKRTNTLAVHRRIHTRERNFVCDVCGRAFVQASQLATHQRRHFDRFTRHCALCDKGFFTNAELHSHMNVKHAANQHVCDACGKSFPNNHSLARHARSHDPDFEPAKHQCEFCGKTFAYRNSLVAHVKSHTGENKYDCHLCGKSVSSKGSLQDHLRLHGGEKNLVCDVCGKAFHKRTTLVVHKRTHTGEKPYVCETCDKAFTQHSTLVIHRRYHTGQRPYQCGVCNKSFVSKALLNGHGKVHANPST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -