Cfun007500.1
Basic Information
- Insect
- Cecidostiba fungosa
- Gene Symbol
- -
- Assembly
- GCA_900474305.1
- Location
- UCOJ01000889.1:52653-54731[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-07 0.00011 22.0 0.1 2 35 16 49 15 55 0.89 2 2 2.4 2.2e+03 -1.4 0.0 23 31 112 120 110 120 0.85
Sequence Information
- Coding Sequence
- atgGTTCGAAAATACATAAGGAAAAGTCAGAGGAAACTGTGGACCGCGGATGCCATGAAGATGGCTATAGAAGCTGTCATCCTGAACAATATTAGTGTCAGAAGAGCCTCCATAGAACACAAGGTACCCCAGGCAACGTTGTCCAGGAAGATTCACCAAATTCGCTCTGAGCCCGAGAAAGACATAGACTCGCTTGCCAATCCCTATGGATCTAATTTTCAAACCGTATTCAATAAAGAGCAAGAAGCAATTTTGTGTCAGTACATTCATACATTAGAGGATCAATTCATACTATTTAATAATATGGATGTCAGGCAATTGGCTTATCAAGTggctgaaaaatttaatattcctCACCGGTTTAATAAAGACTCCGCTGTGGCAGGGGAAGACTGGTACAGAGGATTTTTAAAGAGGAATCCAGAggtttgtataaaaaaacctGATGTGAATGACAAAGTTAAAGGAATTAAGAAAGACAAAGTTCACAAATTTTTCGACTTACTGGAAGGTATAGTTGATAAGTATCCGTTGGAGGCCAGTGATATTTACAACCTCGATGAAACTGTTATAACTTGCTcgttgaaaagaaataatgaagTAGCTGCATCTTCTACAGAAAATACAGAATCGAATAGTAACCAGAGCAAATTGGTTACAGCGACAGTTTGTTTCTCAGCTAGTGGAGCATATGTACCGCTTATGCTGATTTTTCCATGCGCaaccaaaaataaatccttTCTCAAAGGTGCACCACCTGGAGCATGGGCTGAATACGATCAAAGTGGACAAATGCAATTAGATATTTTTGTCACTTGGTTGAAGAAGTTTATAAAGTTTTCCAATGCGTCTAAGGATTCTCCAGTTCTTCTTATTGTAGATGGTTATCGTACTtacctaaaaaaattacaggtACTTGAATTAGCCAAGGAAAATGGAGTAAACATATTATGTTTGCCTCCATATTGCACTGAAAAACTTCAGCCTATGCAGCAAGATTTTATGAAATCATTGAGTACTGCTTACACAACTGAAGTTGCAAAATGGACACATGCTAATCCCGGACGTTCGGTTTCCATAGAAGAAGTTTATCATCTATTTGGAAATGCATTCATGAAAGTTTCTACTATAGCATCTCCTGTGGATGGCTTTCGTAATACAGGGATTTGGCCTGCAGACAGAGATCGCTTTGAGGAGGAGTTCATTGAACTTACTAAAGAAGgtTTAAAATCTAGTTCACAACTACTAACGGCTGCTGTGACAGAGACATGTACGGGCACAAATGATATTCTTGTTGAAACGGCGATTATACCAAAAACAGCAGTTTCCAAAAATATTGTGCATGAACCAATTGTTGTTATTACACAAGGCCACAATCAGCCATATGTTGTACAATCACTTGGTACATTAAATCAACAAAATGGGCATATTGTACAACAAACAGTTGTCCAGCAATCTCTCAATCAACCTCAAGTGATTCAGCATTATTCTATAGTTGATGAACAAACTACACAATCGATTACAATAGAAaATGTGACTGCTTCAGAAGAAGATTTTatagaagatgaagaagaagaagtaagtTCAGTAATCATTCCTCCAGAAGCACAGTTATCTGAAGTACAAATGGAAGACATACAGAATTTAATTCAGAGTCAAAgaaaacttcatttttatgtttcacCTTACAGATTAAATCTGTCGcgataa
- Protein Sequence
- MVRKYIRKSQRKLWTADAMKMAIEAVILNNISVRRASIEHKVPQATLSRKIHQIRSEPEKDIDSLANPYGSNFQTVFNKEQEAILCQYIHTLEDQFILFNNMDVRQLAYQVAEKFNIPHRFNKDSAVAGEDWYRGFLKRNPEVCIKKPDVNDKVKGIKKDKVHKFFDLLEGIVDKYPLEASDIYNLDETVITCSLKRNNEVAASSTENTESNSNQSKLVTATVCFSASGAYVPLMLIFPCATKNKSFLKGAPPGAWAEYDQSGQMQLDIFVTWLKKFIKFSNASKDSPVLLIVDGYRTYLKKLQVLELAKENGVNILCLPPYCTEKLQPMQQDFMKSLSTAYTTEVAKWTHANPGRSVSIEEVYHLFGNAFMKVSTIASPVDGFRNTGIWPADRDRFEEEFIELTKEGLKSSSQLLTAAVTETCTGTNDILVETAIIPKTAVSKNIVHEPIVVITQGHNQPYVVQSLGTLNQQNGHIVQQTVVQQSLNQPQVIQHYSIVDEQTTQSITIENVTASEEDFIEDEEEEVSSVIIPPEAQLSEVQMEDIQNLIQSQRKLHFYVSPYRLNLSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -