Basic Information

Gene Symbol
Arid4b
Assembly
GCA_900474305.1
Location
UCOJ01001268.1:2294-10131[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-28 6.8e-25 87.4 0.2 1 89 312 399 312 399 0.95
2 2 2.4 7.5e+03 -2.5 0.1 44 70 1630 1655 1619 1663 0.65

Sequence Information

Coding Sequence
ATGTCTTGTAATGTTTTGCAGGGGGACGATCCGCCTTACCTGTCGGTGGGCACCGAGGTCAGTGCCAAATATAAGGGTGCCTTCTGCGAGGCTAAGATCAGGAAAGTTGTGCGCAGCGTCAAGTGTAGAGTGACTTATAAGCAGGGCTTGGGCACGGCCACTGTTACTGATGACCAGATCAAAGGAACGCTCAGAGTTGGTGCATCTGTCGAGGCCAGACACAATGATAGAAAGGACTTTGTTGAGGCTACTATTACTAAGATACAAGACTGCAGTCAGTACACTGTTGTGTTTGATGATGGGGACATTACTACGCTGAGGAGGACAGCTTTGTGTCTGAAAAGTGGTAGACATTTTGCTGAAAGTGAAACTTTGGATCAGTTACCTTTGACGCATCCGGAGCACTTTGGAAATCCTGTTATTGGTGGGAGACGTGGCCGCAGATCCAGGCAAACTCAagaTGACAGCAGtgatgatgaagatgatgCACCACGAGGTAGCAATGACTCAGGCTCGGGTTCTGGAGGGAAAGAAGGTTCAGAAACAGAACCTGAGATTGGCAGGGTTGTTTGTGTGGAACTTGGtgacaaaaagaagaaagacaaTTGGTTCCCTGGACTTGTTGTTGCCCCCACTGCACAGGACACTGTGAGGATAAGAGTTCGCGATGACTACCTTGTGAGGTCATTCAAGGATGCAAGATATTATACAGTgccgaaaaaagaagccacTGAATTTACCAAAGAACTGGTCAATAAAGTGGAAAACAGCGCTTTAAAAGTAGCTGTGGAAAAAGCTTtactatttttagaaaagaatGAGCTGCCTCCTCATTGGGACAGGGATTCATTATTTGGGAACTCGGTATTAAGTGGAAATAGTGATTCAGATGGAGAGCTTGACTCAGATagtTCTGATGATGAACCACGTGAAGAGAAAGACCATTTTGTGGCACAGCTGTATAAATTTATGGATGACCGAGGCACACCTATAAACAATTGCCCGATGATCGGCAACGAGGATATCGATCTGTATAGGTTGTTTCGCGCAGTATACAAGCTCGGTGGCTATAATCGCGTGACCAACCAGAACCAATGGAAGCTAATAACTCGGCGACTAAGCTTCTCtatgcaaaataattcatcgacGCACAACTTGGTCAAACAAGCTTACAAGAAATTCTTGCATTCCTTTGAAGACTTTTATAGGAAATTGGGCTGCACAATGGTGAACCATCCGAGAGGTAGTATGCGAAAGCAACGTCCGGGACGTAGCTTGATTCGCGATAAAGATAGAAATACACCTGTACCAACACAAGATAAAATGGTGATTAAGACggaaaaagaggaggaagagaaagaggtgaaaaaaagcagcagtgtCGTCCCCGacgaggaaattaaaaaagagaagcgcgaaataaaaaaagaacctgtagtaaaggaagaagaagtaCCGGTTAAAGTCAAACGGAAAGAAGAACCAGCGGAGGAAAGTGCGAGCGGCCAAGAGAGCGATGTCAACATAGAAGGTGAAGAAGAGTCTTCCAGCAGCGAGAAATCCCAGAAGTCTAGTACATCGAGACTTACACCGTCTTCTAATGTTAGCAGTAAGTCCAAAGCTGCAACCACCGCAGTTGCTGCGACTACAACAGCCAAGAGCAAGGAAGAAGCAGCTAAGAAGAAGTCCATgccagagaagaaaaagccagagacaaagaaacaagaaaagaaagatgaGAAGACCAAGGAAGAAGACAGCACCAAGACAAGGTCCAAATCTAAGGAAGATGTGGTGAAGGGCAGCAAACCGAATTCTTCTGAAGTGAGGGAAACGAGAACACCTTCGCGAGAATCTGACAAGAAAGCCTTTAACAAGCAGAGAAGGATGACTGACGAAGAGCTGAAGAAACGAGgcaggaagaagaaagaagttGAGGGTGAAAAGGGTAGAGCTCCAGAGGAACGATCAGTCGAATACGCACCGAGCTACAAAGGACCCGTGGAAATCGGAGATAGACTAAAGGTTTACTATGGTCCAACCCATGAATCGAAAGTCACCTACGAAGCTAAGGTTATTGACATGGAGAAGGATGGCACCGAAGCCGTGTATTTAGTCCACTACACTGGCTGGAACACCAGATACGACGAATGGATCAAATGCTCGAGAATAGCGCAAAACTTCACGCAAGCCCAAGGTCGTGTTAAGCGAACCAAAAAAACGCCACGACCACAAACTCCAAGTGCGAACTCTTCATCATGTAAGTCTTCCAAAGGCGCGACAGCACCAAATGCAGGAACCGGTGCCGCATCAACGGCGAGTGCTCAAAATCGTCGACGGGCGCAAGGCGATGCACCTACTGGTAGCAATTCCTCGTCTATCGGTAACAGGGACTCACGCAAAGATGATCGCGAAGGCACACCCGCGACGCGCTCCACGACTCCCTCACCCCTTACCTCGTGCATTTCGCGGACTAAGAGCCCCGCAACAACAGCGAACAACAGAACGACGCGCGTGACGCGTAACGAACTTGGCAGACGTACAAGGAGAACGTCGGATCATGCGGATGCGATGGTTGCCGAAGAGTCAGAAAGCGAGAATTCTGATTCTATGGAGTCGGAAACAAGTGCGGAGCCCGAAACGTATGTACGGCGAGGATCGAGATTTAAGACCGCGGGTGCGCAGGAGAGAAATCGCAGGGAAGCCAGGCGAAGAGCTGAAAGTCGCATGAAGATCGAGGAGACAAGCGACGCCGAAGCAGAGAAAGACGTGGAGGAACCTAGACGAGGAAGAAGACTTAGAAAAACCATCGGCAAACTGCAAGAGGTCAAGTCAGAGCCAGAATCAGATGAAGAGCAACCTAAAGGCAGGGATTTTGATCTAAATCAAATCAGGTCGGAGCTCAAGGGCTTCGATAAAGCAGTGAAACTTGAGATAACAAATGTCGAGCCGGACCAAGAAGAGGAACAGGAGGAGGAGATGGCAAGCCCTGTAAAGCAGGAAAAAATGGAAACCGAAAGTCTTCCTGATAAAAAGGTGATTCAGGAGCCCGACAAGAAGCGTGAAACACCAAAGGTTGAACCACAGAATGTTATACCAATCAAACGAGAACCTATTAAGGTCGAAGCCAACCAATCGGAGAGTACCGAGGACATTTATGAATTTAAGGAACCCGAACCTTTCGAATTTGAAGTGCGTAACAAAAGAGATTCAGGCGGTAGCACTGGCAGTACCACGGACAAGGacaaagagaaggagaaagagaaggacaATAAGGATAAGCCAAAAAAGCGCACATTCGAGGAAGACAAGAGTCCAAAGAAGCGTCAGAAGACCTTTGGAggtacaacagcagcagcagcagccagtacACCATCGCCTACTGCAAAGGTCGAACAAAAATCCGAGAATAGTCCACTGGATCAGCAAAGTACAGACCCTAAGAAGAAGGTGAggaaaatatttaagaaaataacgaACGAAGAACTTGAAGAAGTTGATGCAGAGGGTGATGATGGTAATGCAACTATCACAAGGGATCTATCCAAGTTATTACCAGCAAATTACAGTGGAGTGGCGGTGCTTAAGCGTAAAGAACAGACAGCGGCTACGGCGCATAACAACGATGAATCTGTTGCAGCTACAGCAGTCACAGCTATTGAAAATTCCACCGATAGTCCGAAAAAGAGGCAACCTAAAACGTTTGGCAgtcctgctgctactgccaaAAGCAACGACAGTAAGACTGAGGCTTCTGTACAGGAGATCGGTGATAGTAAGAAGAAAATACGTAAAATATTCAGCAAGCAAGCGGACGAAAACGACGAAGTCGACGAAACTGCGCCAGGTAAAGAACTCGCCAAATCCATTCCGAACAACAGCAGTTCTAAGGCTTCGTCTCGCAAGGATGACGTGGATGAAAGTCCGACAGTCGATAGCGTTAGTAGCAAAGAGAAACCGAAGAGGGTTGTGGATGAGGATGCGTCAAAAAATCCAAAGAAAAGGCAAAAGACTTACAGGGGTGTTGGGGGAACTCCAGGTGCTGTGATAAATGATGATGACATCGAGGTACCGAATGTTACAAGTACAACAACTAGGGACATTGCTACTAAGTATTTCTTGCATTATTCCGGACCTAAAACGAAAGCTGCTGCGATCGCCAGCGAAAACGATAGTGCACAAGATCGTCTGGCTACTGCTTCGAAGTCCGATTTGCAAGCCCGTAACGAACCATCTAAATCGTTCCCGATCTCAGTTAATACTTCGTTGATCCACGAAAAAGATGACGTGAAATCGAAAACGGGTGAGTTGACAGCATCTACTTCAAGTTCTGTTGATAATAAACAAGCATCGACGAGTAGTGACAAGAAACGAGTTCCGGATTCCGGCACACCTGGTAAAGCAGAGCCCAAGGAGCAGCTGAAAACGTTGGATTTCACACCAATCGTTCCGCACACGTTACCTGTACCCGCGCCTATTAGCGCTCGCTTACCGGCTACCGCCAGCATCGAGGAAAAACTTTCGGCTGCGGCGGTTTTCCGCAGCAAACTTAAGGATACAAAGAAGGACGACGACTTGGACAGCACTCCTAGAAAAACTCTAAAAGATGTGACTAAAAAGACCGAAACGCTGTTTGCCAAGAAGGccaaagaaaaggaagaaagtaAAGTTAAGCACGAGCctgagaagaagaaacagcaGATAATAGAAGCGATTATTCCGAAGAAGGATCCTCTGCAGGAAATCGAGATCCGAAAGGATCCTCTACTCGaggtaataaagaaaaaggaggacGACATTCTGAAGGCCAAAAAGGAATCGGAGACAAAGGTCCCTGTGCCCATGCCAAATACAACCGTCACCAAGACTTATGGCAGCCAGAGAAAGGATACGGTGTCGAAAGTCGAAGAGACTTGGAAGAAGAGTGCTGCGGCTCTCGCGGTTGCTACAACGGCGAGTAACTCCAGTGAAAATGCATCGAGTGATTTGCCGAACAGCGAGCCGGTCAAGGATTATGTCGTTGTGCGCAAAGAGACGATAGTGAGCAAAATCAAATCGAGCATAGATCGAGACTCGGTAGACTCTACCGACAGCAGTGATAGCGAAAGGCGGCTTACCATCATCGATAGTGAGGACTTTCCCGATGAGAAGTGCAATGATTCGAGCTCCGACGTCAAAAGCAAGACTACACCAATTGCCATGGTCAGTAGCCAGTTCAACGTCATAACACAGCAGCAACGAGCGAGTCCAGTAGTGCCTTCCCATAGCGAGGTACATCAGCAGATCATAGGTGTTACTGGAGTGGTGGGGGGTGCTATGCTGCACGCTAAAAGTACGAAAATGGAGGAGGACGGGGAAAACTTGAACTCACTTCTGTGCGAAGAGGAGATACCGGGCTCGCCAACACCTGGATCGGAATCCATGGACCAGGAGCACAGGGCTAGCAGCTCACAGAATCTCATCAAGTCTGATATGGAAAGTAAAATGGCCGTAGCATTCGTAGCAGCTCAATTGCCGCTAAGCACGATACCGTCGTCAACTCAGATGACTAAGAGTGCCATGGTGACTACTATGAGTGGCGGTGTGCCTGTTCCCCAGAGTATGAACAATCTCGTAACCGTATCCATGACTGTTCAACACGCCAGCATTCAGCCACTCAGGCAAGCACAACCTCACCCTCAACCATTGCCGCAGCCACAGCATCAAGCGCAACACCAGGTTCAGCCACAGGTACAACCAGTAGCACAAGTACAACATCCGcaacagcatcatcatcaccagcaggcacagcagcagcaacaacaaccacAGCAGCACCAGCCGCAGCCACAGCGTCATGATCAGCATCATCCTGCGCCAATGTTAGTAGCCGTGCAACGCCGCGAGAGTAACGAAGCCGCTCCTGTCATGGATAACACGCCCCCAACTACACCCGACTCAAGTATTTCGAACATATCAGGTTCGCCACGTGACGAACGCACTGGCGGGTCGACACCTTCCTCTTCTGAAGACAACTCCAAGCTTAACCGAGACAGCTCCGAGGCAGAGAACGATAGCGGAGGTAAGGGCAGTGGCCCAAGCGAAGACGATGGCTCGTCGCTCGTCAATTCAGAGCATGGCGGCAACGGCGGTGCTACCTCTTCGTCGTCTGACCGACTACCTAAGCCACCGGCCAAGCGACCCATCAACGATGGTGAAAACGTCTCACCCAAGAAGCGTAAGAAGCGAAAAGATCAAGACAGTGGTTTGTCGACTAATCAAGCGAGCAACGGCAATTCATCAGGCAAGAGGTCGCCAAGACAGAGTGCTCGCAACGCAAGGCATGGGACGGGAAGCGACAGCGACGATACCAGCGAAGGCTCAAACCAGTGCATGAATAACTCAACACAAGCTAACAATAACTTGGCGAGGTCCGAAGTACCTCCAAATCCAGCAAGAAATATGATGAGTGATCGACCCTCTACGGATATCGGCATGTACATGAAACCACCTAGCACTACCAAGTACAACTTTATCGTAGACATTGatcCAACATTGGATGGAACGCAAAGGATAGCGATTTTACAACAAAAGATGACAGAATTGCGGAAAACGTATATGTCCGTTAAAGTAGAACTCGCTGGTATTGAGAGGCGTCGCAAAAAGTTAAAgcgaagagagcgagaagCACAAAAAGCTGCAAAGGCTGAAATGCAACAGGCATGCTCGTGA
Protein Sequence
MSCNVLQGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDDQIKGTLRVGASVEARHNDRKDFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQTQDDSSDDEDDAPRGSNDSGSGSGGKEGSETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSALKVAVEKALLFLEKNELPPHWDRDSLFGNSVLSGNSDSDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLSFSMQNNSSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSMRKQRPGRSLIRDKDRNTPVPTQDKMVIKTEKEEEEKEVKKSSSVVPDEEIKKEKREIKKEPVVKEEEVPVKVKRKEEPAEESASGQESDVNIEGEEESSSSEKSQKSSTSRLTPSSNVSSKSKAATTAVAATTTAKSKEEAAKKKSMPEKKKPETKKQEKKDEKTKEEDSTKTRSKSKEDVVKGSKPNSSEVRETRTPSRESDKKAFNKQRRMTDEELKKRGRKKKEVEGEKGRAPEERSVEYAPSYKGPVEIGDRLKVYYGPTHESKVTYEAKVIDMEKDGTEAVYLVHYTGWNTRYDEWIKCSRIAQNFTQAQGRVKRTKKTPRPQTPSANSSSCKSSKGATAPNAGTGAASTASAQNRRRAQGDAPTGSNSSSIGNRDSRKDDREGTPATRSTTPSPLTSCISRTKSPATTANNRTTRVTRNELGRRTRRTSDHADAMVAEESESENSDSMESETSAEPETYVRRGSRFKTAGAQERNRREARRRAESRMKIEETSDAEAEKDVEEPRRGRRLRKTIGKLQEVKSEPESDEEQPKGRDFDLNQIRSELKGFDKAVKLEITNVEPDQEEEQEEEMASPVKQEKMETESLPDKKVIQEPDKKRETPKVEPQNVIPIKREPIKVEANQSESTEDIYEFKEPEPFEFEVRNKRDSGGSTGSTTDKDKEKEKEKDNKDKPKKRTFEEDKSPKKRQKTFGGTTAAAAASTPSPTAKVEQKSENSPLDQQSTDPKKKVRKIFKKITNEELEEVDAEGDDGNATITRDLSKLLPANYSGVAVLKRKEQTAATAHNNDESVAATAVTAIENSTDSPKKRQPKTFGSPAATAKSNDSKTEASVQEIGDSKKKIRKIFSKQADENDEVDETAPGKELAKSIPNNSSSKASSRKDDVDESPTVDSVSSKEKPKRVVDEDASKNPKKRQKTYRGVGGTPGAVINDDDIEVPNVTSTTTRDIATKYFLHYSGPKTKAAAIASENDSAQDRLATASKSDLQARNEPSKSFPISVNTSLIHEKDDVKSKTGELTASTSSSVDNKQASTSSDKKRVPDSGTPGKAEPKEQLKTLDFTPIVPHTLPVPAPISARLPATASIEEKLSAAAVFRSKLKDTKKDDDLDSTPRKTLKDVTKKTETLFAKKAKEKEESKVKHEPEKKKQQIIEAIIPKKDPLQEIEIRKDPLLEVIKKKEDDILKAKKESETKVPVPMPNTTVTKTYGSQRKDTVSKVEETWKKSAAALAVATTASNSSENASSDLPNSEPVKDYVVVRKETIVSKIKSSIDRDSVDSTDSSDSERRLTIIDSEDFPDEKCNDSSSDVKSKTTPIAMVSSQFNVITQQQRASPVVPSHSEVHQQIIGVTGVVGGAMLHAKSTKMEEDGENLNSLLCEEEIPGSPTPGSESMDQEHRASSSQNLIKSDMESKMAVAFVAAQLPLSTIPSSTQMTKSAMVTTMSGGVPVPQSMNNLVTVSMTVQHASIQPLRQAQPHPQPLPQPQHQAQHQVQPQVQPVAQVQHPQQHHHHQQAQQQQQQPQQHQPQPQRHDQHHPAPMLVAVQRRESNEAAPVMDNTPPTTPDSSISNISGSPRDERTGGSTPSSSEDNSKLNRDSSEAENDSGGKGSGPSEDDGSSLVNSEHGGNGGATSSSSDRLPKPPAKRPINDGENVSPKKRKKRKDQDSGLSTNQASNGNSSGKRSPRQSARNARHGTGSDSDDTSEGSNQCMNNSTQANNNLARSEVPPNPARNMMSDRPSTDIGMYMKPPSTTKYNFIVDIDPTLDGTQRIAILQQKMTELRKTYMSVKVELAGIERRRKKLKRREREAQKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01486898;
90% Identity
-
80% Identity
-