Csub014310.1
Basic Information
- Insect
- Catotricha subobsoleta
- Gene Symbol
- stc_1
- Assembly
- GCA_011634745.1
- Location
- JAABKK010000152.1:24189-27862[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.18 2.5e+03 -0.8 0.7 4 10 478 484 477 489 0.87 2 13 1.2e-06 0.018 15.7 21.3 1 19 489 507 484 507 0.90 3 13 0.00018 2.5 8.8 8.8 1 18 543 560 543 561 0.93 4 13 2 2.8e+04 -4.2 1.0 6 10 591 595 590 595 0.87 5 13 2.5e-07 0.0035 18.0 14.1 1 19 601 619 601 619 0.92 6 13 7.8e-06 0.11 13.2 14.1 4 18 667 681 660 682 0.86 7 13 0.045 6.4e+02 1.1 12.1 1 11 722 732 722 744 0.91 8 13 5.2e-10 7.4e-06 26.5 14.1 1 18 749 766 749 767 0.97 9 13 1.9 2.7e+04 -4.1 0.7 6 10 796 800 795 800 0.78 10 13 2 2.8e+04 -6.2 8.3 10 18 814 823 803 824 0.74 11 13 9.6e-09 0.00014 22.5 9.2 1 16 860 875 860 882 0.88 12 13 0.01 1.4e+02 3.2 9.6 1 19 892 912 892 912 0.93 13 13 1 1.4e+04 -3.2 0.2 8 12 928 932 928 932 0.78
Sequence Information
- Coding Sequence
- ATGGCGGGTCATAATCCAAACGATAACTTAAACGACTACTTCGGTaatgaatacataaattttgatcaatttttgaTGCAACACAATATCGGTCAGTCTCAGTATTACAATATTCCCCCACAAGGTTATGCTTATGATCAAAGTCTGGCACCATCGTCAAgtcaattacaatattttccgAATATGGGATATAATGTTCATTATCCACAACAACTAAATAacgaagaatattttaatgaggACCTGGTACGAAATTCAAATCTACTACCAACAGCTAATGAATTTGTACCAAACTTTCAGCCAGCAACatcttcaaatttattaatggcAACGGCAACCGAATTCATACCTAAAATTCCGCAATTTAATGAGCAGCACATGTCTAACAATGATATAAACAGTAAGCTAACATCAATAGATCATAAAATGCCTTCAAACATTGAAGCTAttgataataacaataaaatgtgcAACGATAATAGACAAACAAAGCTTGAACAACCTATTAACGATGGAACAGaatcgaaaaatgaaaatctgttATATGCTTTGAGTACAGCACGCATCGATGACAATTCCGTGAAAGGCTCCACTAGTAATGGTGGTGCTATAAAAAAGGTGAAAAGTAAtcgaaatcaaaataaagatAACAACGAGCATGGTATGGGAAGTAAtcgaaatcaaaataaagatAACAACGAGCATGGCATGGGAACGCCTCGCAATGAAAGTCGTTATCGTAATGGagAAGAGAAGCAACATAGAAATACCTCCTACAAAACAAGTGGtgaattaaattcacaaaatgaaCGAAATGATCATCGAAGAGtagatagaaaatatgaaaatcgaaGGACTGGAACGGGTCGTACTGCTTCACAGTACGATAACAGTGATCGATAtaccaataaaaatgaatattacagCGATAGATATACTTCCGACGATaggtcatcatcatcaaactATAACAATCATCGATGGAATAATAATGGCCACACCAATCACTATAATGCTGACAGTGAGATTAGcacaaaatacaattcaagaaacaaagaaaaacgaaatacaGAACCACATAACAAAAAAGTAGAAGACTTTAAGCTTAATCGAAATCTAAAGCCaccgaatttaaaatttgattcaaGTAATTGTTCGCAACGAGAAAAACTTATTCGTGAAATTGATGCCGGTAAACTGGAGTGTTTGGTATGTTGCGAAATGATTAAACCATTTCAATCAATATGGTCGTGCTCAAATTGTTTTCAcatcattcatttaaattgtgttattaAATGGGCGGCCAGTTCTAAATCGGATATAGGTTGGCGCTGTTGTGCATgccaaaatataacaaaaaaggTACCACACGATTATTACTGTTTCTGTGGAAAGTTGAAGAATCCGCAGTACAATCGTAACGACATTGCACATAGTTGTGGTGATGTATGTGGACGATCTGACTGTTGTGATCATCGATGTACGCAATTGTGTCATCCAGGTCCCTGTCCCCCGTGTCAAGCAACAGTGACACGTAAATGTGGTTGTGGTCGTAGTCAGAAGACTATGCAGTGTTGTCAAAAAGACGATTTAGAATGTGATCAAAATTGCGATAAGGTTTTAGGTTGCACTGTGCATCGCTGTTCTATTAAATGTCATATAGGAAGTTGCACTGAATGTGATATGGAAATAGAGCACATCTGTTTTTGTACTCGTGAAAAGAAGACAATGTCATgcacaaaagaaaacaatgagGTAATGAAATACTCTTGCAATAAAACCTGTAATAAGCAGTTGAAttgtaaaaatcataaatgtaaagaaatatGTCATCCTGGTGATTGCGGCGAATGCCAATTGATGCCAAATGTTGTGACATCTTGCCCGTGTGGCAAAATGCCAATAATTGAAGGTCAAAGAAAATCTTGCAAGGATCCCGTGCCACTTTGTAATGGAGTTTGCAAGAGACCATTGAGTTGTGGACAACCAAGCAATCCTCatttatgtcaaaataaatgtCACAATGGTCAATGCCCACCGTGTAATAAGCAAACGAGTGTAAAATGTCGCTGCGGCCATATGGATCAAATGATTAAATGCAATCAATTGTCTACCCGAGCTGATGATGCACGATGCAAAAAGCGATGTACGAAAAAACGTAACTGTGGCAAACATAAATGTAATCAAGAGTGCTGCATTGATATTGATCACATCTGTCCTTTACCATGCAATTACAGTCTTTCATGTGGCAAACATAAATGCGATCAAACTTGCCACAAAGGTCGCTGTCAACCGTGCTACCGAAGTTCATTCGAGGAATTATATTGTGAATGTGGTGCCAATGTTATTTACCCACCAGTTCCTTGTGGCACAAAGAAACCAGCCTGTGACAAACCATGCAAACGCACACATTCTTGCGATCATCCGGTTAGTCACAATTGCCACTCCGCTGCTACGTGTCCCCCTTGTATGGCTTtcacaacaaaatattgtcaCGGCAAGCATGAACAACGAAAAATTATTCCATGTAGTCAAACAGACTTTAGCTGTGGTTTACCATGCAATAAAGCATTACGATGTGGTCAACATAAGTGTATCAAAATTTGTCATGCTGGTCCTTGTGAATTGGAAACGGAtgtttgtaaacaaaattgcACTAAAACACGAATTATGTGCTCACATAACTGCAATGCCAATTGCCATTTGGAAACTCCTTGTCCCGATATACCATGCAGAGAAAATGTTGAGGTTCTATGTCAATGTGGATTACGTAAACAGATGCGTACTTGCCATGATTTCTCATCTGATTATCGTAAGATTGCAACAGCCAAATTAGCGTCAAGCATGCAAGAGATGCAACGTGGTAGTACTGTTGAGTTGAGTGATGTTTTGGGTCccattaaattaacaaataacaaaacTTTGGATTGCAATGAAGAATGTAAGGTGCACGAACGTAATCGTAAACTTGCAATTGGTTTACAAATTCGAAATCCAGATCTATCATCAAAATTACAACCGAAATATTCTGAATTTATACGTGGATGGGCCAAGAAAGATCCAAAGTTGGTGGGTATGATTCATGATAAATTAACTGAATTGGTAAAATTGGCTAAAGAAAGCAAACAAAGATCTAGAAGTTACTCATTTCCCACAATGAACAGAGAAAAACGTcagCTTGTTCATGAAATGTGTTCAATGTTTGGTGTTGAATCGGTTGCATATGATGCGGAGCCAAATCGTAATGTGGTTGCCAATGCAACACGTGAATCATCGTGGTTACCCAGTATGAGTATAATGGAAGTTAGTCAACGAGAAAGTGGACAACGTCGTATACCTGTACCAAGCTACAATGCTTGGGGCACTTCAAAAcgttaa
- Protein Sequence
- MAGHNPNDNLNDYFGNEYINFDQFLMQHNIGQSQYYNIPPQGYAYDQSLAPSSSQLQYFPNMGYNVHYPQQLNNEEYFNEDLVRNSNLLPTANEFVPNFQPATSSNLLMATATEFIPKIPQFNEQHMSNNDINSKLTSIDHKMPSNIEAIDNNNKMCNDNRQTKLEQPINDGTESKNENLLYALSTARIDDNSVKGSTSNGGAIKKVKSNRNQNKDNNEHGMGSNRNQNKDNNEHGMGTPRNESRYRNGEEKQHRNTSYKTSGELNSQNERNDHRRVDRKYENRRTGTGRTASQYDNSDRYTNKNEYYSDRYTSDDRSSSSNYNNHRWNNNGHTNHYNADSEISTKYNSRNKEKRNTEPHNKKVEDFKLNRNLKPPNLKFDSSNCSQREKLIREIDAGKLECLVCCEMIKPFQSIWSCSNCFHIIHLNCVIKWAASSKSDIGWRCCACQNITKKVPHDYYCFCGKLKNPQYNRNDIAHSCGDVCGRSDCCDHRCTQLCHPGPCPPCQATVTRKCGCGRSQKTMQCCQKDDLECDQNCDKVLGCTVHRCSIKCHIGSCTECDMEIEHICFCTREKKTMSCTKENNEVMKYSCNKTCNKQLNCKNHKCKEICHPGDCGECQLMPNVVTSCPCGKMPIIEGQRKSCKDPVPLCNGVCKRPLSCGQPSNPHLCQNKCHNGQCPPCNKQTSVKCRCGHMDQMIKCNQLSTRADDARCKKRCTKKRNCGKHKCNQECCIDIDHICPLPCNYSLSCGKHKCDQTCHKGRCQPCYRSSFEELYCECGANVIYPPVPCGTKKPACDKPCKRTHSCDHPVSHNCHSAATCPPCMAFTTKYCHGKHEQRKIIPCSQTDFSCGLPCNKALRCGQHKCIKICHAGPCELETDVCKQNCTKTRIMCSHNCNANCHLETPCPDIPCRENVEVLCQCGLRKQMRTCHDFSSDYRKIATAKLASSMQEMQRGSTVELSDVLGPIKLTNNKTLDCNEECKVHERNRKLAIGLQIRNPDLSSKLQPKYSEFIRGWAKKDPKLVGMIHDKLTELVKLAKESKQRSRSYSFPTMNREKRQLVHEMCSMFGVESVAYDAEPNRNVVANATRESSWLPSMSIMEVSQRESGQRRIPVPSYNAWGTSKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -