Csub007051.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Catotricha subobsoleta
Gene Symbol
nfxl1_1
Assembly
GCA_011634745.1
Location
JAABKK010007667.1:2401946-2405285[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.57 8e+03 -2.4 0.6 15 18 133 136 132 137 0.81
2 16 2 2.8e+04 -7.9 5.6 15 19 185 189 184 189 0.81
3 16 0.14 1.9e+03 -0.4 0.4 4 10 220 226 219 226 0.95
4 16 6.8e-08 0.00095 19.8 16.9 1 19 234 251 234 251 0.99
5 16 2.7e-05 0.38 11.5 8.1 1 18 287 305 287 306 0.97
6 16 1.5e-07 0.0022 18.6 14.8 1 19 341 359 341 359 0.99
7 16 0.81 1.1e+04 -2.9 1.7 13 18 382 388 382 390 0.69
8 16 2.3e-08 0.00032 21.3 10.4 1 18 394 411 394 412 0.97
9 16 0.19 2.7e+03 -0.8 0.5 1 10 421 430 421 430 0.75
10 16 1.2e-05 0.17 12.5 15.3 1 18 446 463 446 464 0.94
11 16 2.4e-08 0.00033 21.2 13.8 1 19 473 491 473 491 0.97
12 16 0.22 3e+03 -1.0 6.2 9 18 537 546 535 547 0.90
13 16 0.082 1.2e+03 0.3 6.1 3 12 560 569 559 569 0.89
14 16 4.6e-05 0.65 10.7 5.1 1 12 640 651 640 651 0.96
15 16 0.041 5.8e+02 1.3 13.5 3 19 680 696 679 696 0.93
16 16 6.4e-07 0.009 16.6 13.0 1 18 750 769 750 770 0.87

Sequence Information

Coding Sequence
ATGTCGGTGCGTGTTAATAAAACTAACCGCGGTAACTCCGCCGGCAATTCTAAAACCAattccaaagaaaaaaaaaccaataattcCACCACCACCACAAATGCCGTTAACAGCTATAGTAAAATGGTTCAAAATGTGAATCCAGTGGCGGACAAATTTAAAGAAGTTCAAAAAAAGCATATTCAAGCTGCAAAAAAGCATGTAGAAAACTATGAGTCTAGTTCAGAGGAGGAGTTGGAAAATAATTCCTTATTAGAATCGGTTTTTAAAAGCTACGGTGGCGATAAAAATCATCTACAAAAGACTCAAGAGTttctagaaaatgtttttcaatctGGAGCCGCCACTTGTTTAATATGTATTGCAACTGTTAAGCGAACTGATTACATTTGGTCCTGTCAAAGCTGTTAtagttttttccatttaaattgcATACAACGTTGGGCCAGTGACAGTACATACCAGAAACAGATGCACCAAGATTCAGAAGTTGGTTACTATAATAATCAAGGCgaatatataccaaaacaaaagaaaacgatAAAATGGTGCTGTCCAAAATGCAGAACCGATTATCTTCCATCAgagatTCCGCGCCAATATGAATGCTTCTGTAAGAATGAGATAAATCCACCAAATCATCCATGGCTCGTACCTCATTCATGTGGTGAGATTTGTAAAAAGGAACTTTTATCTGATTGTGGTCATCGATGTGTATTGTTATGTCATCCaggtcCATGCCCTCCATGTCcccaaattatttcaaaatcatgtGAATGCGGACAATCAAAACCTAGAACTATTCGTTGTTCTCAAAAACTTTGGAATTGTACAAGCAAGtgcaATCAAAAACTAGCTTGCGGCATTCATTTGTGCGGTCTTCTATGTCACAATGCAGCTAATTGTCCTCCgtgtatgaaaaaaagtcaACAGTCATGTATTTGTGGTAATAAGACTCAAGAACGTAATTGCAATAGTTTAGTATGGTTATGCGATAAACAATGTCAAAAACCATATGATTGCGGTCGTCATAAATGCAAAGTGAAATGTCACATCGGGCCTTGTGGAGACTGTCCATTTGGCCAACCAAGATCTTGCCCATGTGGAAAAGAGcaTTCGCAAGCACCATGTATCGAAGAAATTGGTCCATGTGGTAATACTTGTCAGAAAACATTAGAATGTGGTAATCATATTTGTGCTGAACGGTGTCACAAAGGAGAGTGCAGTTCATGCTTAGAGATTATTGAGAAAAAATGCCGATGTGGTCTTCACACCAAAGAATTACCATGttcaaaattatacttatGTGAAACTAAATGTAAGCAATTAAGAGATTGCAATAAACATGCCTGTAATAGAAAGtGTTGTGATGGTCAGTGTCCACCTTGCGATAAAATATGTGGTAAAGTATTGTCATGTGGAAAACATAAATGTACATCGCTATGTCATCATGGTTTATGTTATCCATGCACATTAAAGGCTCCAGTAAAATGCCGatgtGGTAATACTGTAATAGATGTACCCTGTGgaagagaaaagaaaacaaaaccacCAAAATGTATGTTCCCGTGCAAAATTCCATCAAAATGTCATCACTTAAATCATCATAAATGTCATATGAGTGATTGTCCTGTTTGCGATAAACCTTGCCTGTTACATAATACTACAACGGGTTGTGAACATCCGTGTTCTGCCAAATGTCATGACGCAGTAAAAGTAGCAATTAtcgacaaaaattttaaacctGCTGGTCCATGGGAAATTCAACCagagaaatatgaaattagaaaattatctcATCCACCATGTGACATTAAAGTACCAGTTGATTGTATTGGTGGCCATGAAAAAGTATTATGGCCATGTTGGAACTCTAAACCAGCATCGTGTGGTCGTATATGcggaagaaaattaaaatgtggaAATCATATCTGTGAATTATTATGTCACACAGTTCAAGATTTAAAATCTGTCTTGcAAGAACCATCATGTATGGAATGTCGAGAAGGGTGTATTATACTTCGTCCAGACGGATGCATACATCCTTGCAAAAAACGTTGCCACTTGCCACCATGCGATGAATGTACCGTCAGTACAAAAACAGCATGTCACTGCGGCCTTACACAAGTTTATTATAAGTGTGGTGAATTCTATCGATACACAAATGGAActgaagatgaaaataaaattaaaggaGAACGGGAAAAACAACTAAGCTGCGGAAATCgttgtattaaaaattatatatgCGGACATCGTTGTACTAACGTATGTCATTCTGGTAAATGTCCATCACCAGAGACTTGTAAAAAGAAGTTGAAAGCTTATTGTGAATGTAAAATTCGGAAAATTGAAACCACTTGTGATAAGATTCGTGGCGGTTTTACTATTAATTGTGATGACGCGTgcgaaataaaacaacaagaaATCCAGAAAATTACCGAAGAAATTAATCGAATTAAACGTGAAGAAGAACTAGAGAGAAATCGTCAAGAAATTGAggaatttgaaaagaaatttggCAAAAAGAAGTATAAAGAGCGTAAACGCCAAATAGTTGAGCAAgatgatggaaaaaaaatactcaaatGGATTGGATTGACCATTGCAACTGCTGTTCTATCCATTTtcggttattttattttagttgcacaataa
Protein Sequence
MSVRVNKTNRGNSAGNSKTNSKEKKTNNSTTTTNAVNSYSKMVQNVNPVADKFKEVQKKHIQAAKKHVENYESSSEEELENNSLLESVFKSYGGDKNHLQKTQEFLENVFQSGAATCLICIATVKRTDYIWSCQSCYSFFHLNCIQRWASDSTYQKQMHQDSEVGYYNNQGEYIPKQKKTIKWCCPKCRTDYLPSEIPRQYECFCKNEINPPNHPWLVPHSCGEICKKELLSDCGHRCVLLCHPGPCPPCPQIISKSCECGQSKPRTIRCSQKLWNCTSKCNQKLACGIHLCGLLCHNAANCPPCMKKSQQSCICGNKTQERNCNSLVWLCDKQCQKPYDCGRHKCKVKCHIGPCGDCPFGQPRSCPCGKEHSQAPCIEEIGPCGNTCQKTLECGNHICAERCHKGECSSCLEIIEKKCRCGLHTKELPCSKLYLCETKCKQLRDCNKHACNRKCCDGQCPPCDKICGKVLSCGKHKCTSLCHHGLCYPCTLKAPVKCRCGNTVIDVPCGREKKTKPPKCMFPCKIPSKCHHLNHHKCHMSDCPVCDKPCLLHNTTTGCEHPCSAKCHDAVKVAIIDKNFKPAGPWEIQPEKYEIRKLSHPPCDIKVPVDCIGGHEKVLWPCWNSKPASCGRICGRKLKCGNHICELLCHTVQDLKSVLQEPSCMECREGCIILRPDGCIHPCKKRCHLPPCDECTVSTKTACHCGLTQVYYKCGEFYRYTNGTEDENKIKGEREKQLSCGNRCIKNYICGHRCTNVCHSGKCPSPETCKKKLKAYCECKIRKIETTCDKIRGGFTINCDDACEIKQQEIQKITEEINRIKREEELERNRQEIEEFEKKFGKKKYKERKRQIVEQDDGKKILKWIGLTIATAVLSIFGYFILVAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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