Basic Information

Insect: Catotricha subobsoleta
Gene Symbol: ZNF236_1
Assembly: GCA_011634745.1
Location: JAABKK010002769.1:2222-6428[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.7e-05 0.0039 18.2 1.6 1 23 76 98 76 98 0.97

2 18 1.6e-05 0.0013 19.7 0.4 1 23 104 126 104 126 0.98

3 18 0.00076 0.064 14.4 0.8 1 23 131 153 131 153 0.96

4 18 0.075 6.3 8.1 0.7 3 23 161 182 159 182 0.96

5 18 5.8e-05 0.0048 17.9 2.7 1 23 210 232 210 232 0.98

6 18 0.0058 0.49 11.6 5.5 1 23 238 260 238 260 0.98

7 18 0.00028 0.024 15.7 5.0 1 23 266 289 266 289 0.95

8 18 1.9 1.6e+02 3.7 2.8 1 23 303 326 303 326 0.91

9 18 7.3e-07 6.1e-05 23.9 0.4 2 23 456 477 455 477 0.96

10 18 0.00052 0.043 14.9 0.9 3 23 485 505 483 505 0.98

11 18 0.077 6.5 8.1 1.1 1 21 513 533 513 534 0.93

12 18 0.0017 0.15 13.2 3.7 1 23 595 617 595 617 0.94

13 18 0.0055 0.46 11.7 0.6 1 23 623 645 623 645 0.98

14 18 7.3e-05 0.0061 17.6 2.6 1 23 651 673 651 673 0.97

15 18 0.88 74 4.7 0.1 2 23 680 701 679 701 0.96

16 18 0.34 28 6.0 6.5 1 21 940 960 940 962 0.94

17 18 1e-06 8.5e-05 23.4 1.2 1 23 1042 1064 1042 1064 0.98

18 18 5.7e-05 0.0048 17.9 3.8 1 23 1070 1092 1070 1093 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.7e-05	0.0039	18.2	1.6	1	23	76	98	76	98	0.97
2	18	1.6e-05	0.0013	19.7	0.4	1	23	104	126	104	126	0.98
3	18	0.00076	0.064	14.4	0.8	1	23	131	153	131	153	0.96
4	18	0.075	6.3	8.1	0.7	3	23	161	182	159	182	0.96
5	18	5.8e-05	0.0048	17.9	2.7	1	23	210	232	210	232	0.98
6	18	0.0058	0.49	11.6	5.5	1	23	238	260	238	260	0.98
7	18	0.00028	0.024	15.7	5.0	1	23	266	289	266	289	0.95
8	18	1.9	1.6e+02	3.7	2.8	1	23	303	326	303	326	0.91
9	18	7.3e-07	6.1e-05	23.9	0.4	2	23	456	477	455	477	0.96
10	18	0.00052	0.043	14.9	0.9	3	23	485	505	483	505	0.98
11	18	0.077	6.5	8.1	1.1	1	21	513	533	513	534	0.93
12	18	0.0017	0.15	13.2	3.7	1	23	595	617	595	617	0.94
13	18	0.0055	0.46	11.7	0.6	1	23	623	645	623	645	0.98
14	18	7.3e-05	0.0061	17.6	2.6	1	23	651	673	651	673	0.97
15	18	0.88	74	4.7	0.1	2	23	680	701	679	701	0.96
16	18	0.34	28	6.0	6.5	1	21	940	960	940	962	0.94
17	18	1e-06	8.5e-05	23.4	1.2	1	23	1042	1064	1042	1064	0.98
18	18	5.7e-05	0.0048	17.9	3.8	1	23	1070	1092	1070	1093	0.95

Sequence Information

Coding Sequence: ATGAGTTCAGCGAACgtaatatttccatattatgACGAAGAGGAAAAGCGTAGACTACAAAATAAGAATGGCAACGGAGTCATttctaattcaattaaaagcGTATATAATGATCAACAGCAACAATCTTCTAGTAAACTATACGGTAGTCGATCTATTAAGCTAAAGGAACAATTGAAAGGAGTTGTTATGGCAAACGGACTGCCTATTGTGAATATCGAAACATATTCATGTGATTTATGCAAGAAGATCTTTAGCAATGAGAAATTACTAAGACGACATAAAATTAGTCATAATTACACAAAGCCAtacaaatgtgaaaaatgttcggaatcatttaatgttttaagtaATTTGAATTTGCATATTTCGGTTCATACCGAATCACCGTTTCGTTGTATTCAATgcggaaaaatatttaaacggtTGGCAAGCTTCCAGGGTCAcattaaatcacattttcaaaGTGAATATATTGCATGCAAATTATGTAccgaaatttttcattattttgcatCATATGAAGATCATATGAAATCAGACCACAAGAATTCTGATAAATcgttaaatagaaaaacaaaagtaatgcCTCGATCCGTATCAACTCAAAGCATCAAGAATAAAGTACATCGTTGCTCGTTATGCAAAAAGGTTTTTGGACGAGTCAGTACACTTAGAAGACATGAAAGaattcataaaaattaccgGGCTTACGAATGCACAGTATGCGAACAACGGTTTCATCAATCGTGTACTTTGAAAATTCATCAGCTAAAACATTCGGGACTGAAACCATTTCTTTGTGAGCACTGCTCCCAACGATTCAGTCAAAAAGGAAATcttaatttacatatacagcgatgtcataaaatatcaaatggtAATAATAAACCGGAAGATTTGAGATTTTCGTGCATACAATGCTTATGCACATTTAGTAAAATGAATTCATTACAAACCCATATAACTAAAGCCCATGCACTGACTGTGGATTTTGGTGGTGAATCGTCCGgtgtaaatgaaattgaatttaatgatgTTATTAAGCAATTGGCTGAAATTCAAGATccggtttttgaaaataatattagtacaGCACTAGAGAATAATTCTTGCATAGACACCATGTCGGAagcaaaagaagaaaatttcaaaacagcGGATGACATAAACAACCAGTCAATCTCACTATCGccaatgaatataaatgaagattcaaaaaagaatcaaaaaaagaaaaaaggacaCTTTGATAGATGTGCAGCGTATGTAACATTAGTTGATCATGATCACCATTCACAATCGCATGGTAAAGTAGTACATCGTCGTGTTCGGCAAGTTTTCAAAGGTAACGTTCGTTGGTTAGTGTGCCAATATTGTCCAAAAGAATTTCGACGCCCATCAGATTTAATGCGACACTTTCGGAttcatacaaaagaaaaaccatatgGTTGCCAGCAATGTAAACGTCGTTTTGCCGTTATGAATACATTAACCGTTCATATGCGCACGCACAACAAAGATaagaattcaaaatatagCTGCGAAGTTTGCCTGCAAACCTTTATCACAAAACCCAGTTTAGACAGTCATAAATGTCgaattatggaaaatttaccAGATGTTTGTTCAGATCAGAAATCGTGTTTTACtgcaaatttattacaatcaaCTAGCAATAATGATACTAAAGAGCACATAATGATAATTAGCAATGAAATTATTCCAGCAAAACTTACAGAAACATCTAAAATATCTTCTCAGCTAATGGAATcgaaaaattttcaatgcaGTTTATGTCCTGCTTCTTTTAAGAGAAAATGCCATCTAAATGATCATTCTGTAGTCCATActggaataaaaaattatcaatgcGATATATGCATGAAatattttgcaaaaaaggGTGTTCTTCGGAGacacaaaataattcatgATAGAATTAAACGGCATAATTGTGATATTTGTGATATGAAATTTACTTTTGCGGACAGTTTAAAACGACATAAATTAACACATATCAATGATAACAAAATGACCTGTTCATATTGTTATCAGATATTTGATGGAATTGAACTTTATGatgaacatataaaaattcatcaaatcTATTCCTCTTCAATTGTGAGTGTACCAATTGGTGATCAATTAAACTCCATAGATAATGAACAAGGaccttattatttaatattagacGGAAATTCAGATAATTTTGTCTTTTCGGATTTATCTGGCAGTTTTACagttcaaaatagaaataatgatgataattttcaagaaataccATATATAAGTGATCAGTCCAATGAAATACCGGAAATTagtaagaaaaatgaaaatattcaaaacgtTTCTTCATTAGCCAGTATACTTGAAGATGAAGGGGTAATGGATGTCAATAATGACACCCTTGATAGTACACAAGATTGGATTGTGCCAGCCATTATAACTCCGTCTGgggaaattattgaaataaattcacaatcaataattaaaagtgaaaACGTAAATTCAGCCATCGATGCTAAAAACATTAGGCAAGTGGATGATGAAACGGCAACATTTGTAAAAttagaaacattaaataatacgaaaaataGCTTAACgtataaaatgtcaaatattgaTGTGAATTCATTTAGCGAGTCTTTAACTGATTTAACTGAATTACCTGAATCAAATAATCTTGATACTTCCATTGATGATAGATCTTCGAGTCCAGAAAATCTTGAGATAAATAATATGCAGACAATGCACCTATTCTCGGCGAAAGGAAGCTTAACCGTACATTTCCGTTTACATACTGGAGTCAGACCattcaaatgtaaattttgtgaattaacATTTCGAACGAGCGGACACCGAAGCGTACACCAACAATGTCACGAAAGACAAGCGGCTAAAACGAAATTAGATCCAAAACTaatgaaaacaagaaaatcaaaatcgaaattaagaACTATTGAAGATGCAGTTAATACTATGtatgatattcaaaaaaattatgaacctTCAGTCAGTGCAGACACAAATCAACAGGACTCTATGGCCGaacttttcaataatatgCTAACAGATTCGAATCCACTTAAGATTaacaaaaaatcacAATCGACACCATTATATAAATGCCAaatctgtaataaaatattcaagaaaaataGTCTTCTAAGTAGACATATGGTTgtgcatacaaaaaataagacATTTTCATGTTCCCTATGCTTCAAATCATTTTCACAGAATGTCACCTTAAAATCTCATATTTTGCGCCATCATTCAGTTCCAGAATGA
Protein Sequence: MSSANVIFPYYDEEEKRRLQNKNGNGVISNSIKSVYNDQQQQSSSKLYGSRSIKLKEQLKGVVMANGLPIVNIETYSCDLCKKIFSNEKLLRRHKISHNYTKPYKCEKCSESFNVLSNLNLHISVHTESPFRCIQCGKIFKRLASFQGHIKSHFQSEYIACKLCTEIFHYFASYEDHMKSDHKNSDKSLNRKTKVMPRSVSTQSIKNKVHRCSLCKKVFGRVSTLRRHERIHKNYRAYECTVCEQRFHQSCTLKIHQLKHSGLKPFLCEHCSQRFSQKGNLNLHIQRCHKISNGNNKPEDLRFSCIQCLCTFSKMNSLQTHITKAHALTVDFGGESSGVNEIEFNDVIKQLAEIQDPVFENNISTALENNSCIDTMSEAKEENFKTADDINNQSISLSPMNINEDSKKNQKKKKGHFDRCAAYVTLVDHDHHSQSHGKVVHRRVRQVFKGNVRWLVCQYCPKEFRRPSDLMRHFRIHTKEKPYGCQQCKRRFAVMNTLTVHMRTHNKDKNSKYSCEVCLQTFITKPSLDSHKCRIMENLPDVCSDQKSCFTANLLQSTSNNDTKEHIMIISNEIIPAKLTETSKISSQLMESKNFQCSLCPASFKRKCHLNDHSVVHTGIKNYQCDICMKYFAKKGVLRRHKIIHDRIKRHNCDICDMKFTFADSLKRHKLTHINDNKMTCSYCYQIFDGIELYDEHIKIHQIYSSSIVSVPIGDQLNSIDNEQGPYYLILDGNSDNFVFSDLSGSFTVQNRNNDDNFQEIPYISDQSNEIPEISKKNENIQNVSSLASILEDEGVMDVNNDTLDSTQDWIVPAIITPSGEIIEINSQSIIKSENVNSAIDAKNIRQVDDETATFVKLETLNNTKNSLTYKMSNIDVNSFSESLTDLTELPESNNLDTSIDDRSSSPENLEINNMQTMHLFSAKGSLTVHFRLHTGVRPFKCKFCELTFRTSGHRSVHQQCHERQAAKTKLDPKLMKTRKSKSKLRTIEDAVNTMYDIQKNYEPSVSADTNQQDSMAELFNNMLTDSNPLKINKKSQSTPLYKCQICNKIFKKNSLLSRHMVVHTKNKTFSCSLCFKSFSQNVTLKSHILRHHSVPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -