Csub006121.1
Basic Information
- Insect
- Catotricha subobsoleta
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_011634745.1
- Location
- JAABKK010005767.1:268569-271885[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.44 1.2e+04 -3.5 0.1 78 103 162 187 139 191 0.52 2 4 7.3e-96 2.1e-91 306.4 11.4 2 218 261 477 260 477 0.92 3 4 0.5 1.4e+04 -3.7 0.3 73 103 520 550 504 561 0.49 4 4 0.16 4.6e+03 -2.1 0.8 74 109 805 840 785 850 0.71
Sequence Information
- Coding Sequence
- ATGCTCCGACCGTTTAAATCATTTCTAAGTAATTTGCAGAAAAATGCTCTTGGTGCAACAATATTTGGgaTATCACCTGACATGATGAATACTACAGAGGAAGAAGAAATTGTCAATAATACtgtcatatttaataatgatgaaGGGGTAGAAAATGATCCTTTATCAGATCCTTTAGctattgatgatgaaattgaaaatcaaactGATAGTGCGAATGAATATACATCGGGGAATACAACGTTAACTGATTTAGATAGTTCAACTGATGGACAAATAATACTCATAGAtgtaaatagtttaaaaagttCTTTTTCAATTCCTGAAGAAATTGTATCTTATATGcctaattcaattgaattagcTGATTCAAAAGAGAATGTAACGTATGTTGATAATCTTGAATTAGTAGACGACACACAGAAGAAAACCGAATTAATTATAGAACATAATccgataaaattagaaaatcattGTATTGTGAATTCACTTATGAAACCACAATCTAATAGTAATGCCACTGCAACTGAATCTAATGttattaatgatgatgatatagATGGTAAATACAACCCAATACCAACAACATTAGTCGATGATATTAATGAGGAGGTTGAGGGTGTTCGAAGTGATGGCTCTGATTCTGGACTCGGTTTAGAATTATCTACAGCTTTAATAGCAATTGAACCAAATGTGCCCCAACTTGTGCTCCCCGTACGCAGTAACTTAAAACGTCGCTCAAATTCATGCGATAAATCAGACATAATTGATTCAAAAAAACCAAAGCGTAGCATTCAGTTTAGCGGTGTAACTGTTTACTATTTTCCTCGTATTCAAGGATTTACATGCATACCATCACAGGGTGGCTGTACACTTGGTATGGGACCACATCATTATGATGAACGATCATTTTCAATGTCCGAACATAGTGCTGAACAAAAACGTATTCATCGACAGCAAATGCAAGAATTGAATCCACGCAATTGCATTAGTTCTAGCGTGGGAAATAGTACCGGTGGCATTGATCAATCAGACACCGATGAATCAGACAGCGAAGAAGAGGTAATGAGTGATAATAGTGGCTCGGAACTGGATACGGAAACCAATGGTTTTTTGCAACCTGTATCGCAACGACAACGTAGAGCATTACTTAAAGCAGCTGGTATTAGAGATATTTCAtcgtatgaaaaaaatgattgccGAGATATTCGTACATCGCGGGAGTTTTGTGGTTGTAATTGTCGTGattATTGTGATCCAGATACATGTTTTTGCAGTCAATCAGGCATCAAGTGCCAGGTTGATCGTGCTAGTTTTCCATGTGGTTGTACACAGGATGGATGTGGCAATGTTATTGGtcgaattgaatttaatcCAAAACGTGTACGAACGCATTTTATTCACACAATAATGCGTTTAGAATTGGAAAAGAAACAGAAGAAGGCCGATGAACATAATACACTGAATTCATATGATGGACGATTAAGACTTAGAGGCGCTGGAATTAGTAGCACCGTCACAACACATTCATCTGTACCAGCTCAACAGCaccaatcaaatataaatgaattaagtaattataataatgaaattgtatatACGACTGCGGCATCATCAACTACTGACGAGGTCGATGATCAATCTATTAgctgtaattttaataataatagtcacGGAAATAATATACGTAATTTGAGTTCAACAATAATACCAGAATCACCTTTAGATTTACATTATACATTTCGAAATGATTATCATTTGGGAACGTCGTCACAACCATCACAACAAATACAACAatcaaactttttaatttataataattcacaaTATTATACACCGACtgcaaataatacatttaatgatttcacattaaatcataataatcatTCATCTCATTtacttcaaaatttttcaaattattcatcAGATGGACCGTACCAAGGGTCAATGGAAGTTGATGGCATTACTGATATTATTGGTGTTTCAACATgtgcaaattatattaataattacaatgaTGCTATTGATGGTGctgttaatataaatagtgCTTTGTTTGATAGTGGCTCAGTTATTGAAGATGTTGTTTCCGCAACATTACCAATCACCACAATCATTCCAATTACAGTTGAATCAGAATCAGAACCTGAACCAacagataaaattttaaataaaattagtcaaAGCTGCATTTCTAATATTGATAAAGATAATCATGAAAATgataacaatgaaattaatctGGTTAATTTGAATCCATTAAAATCAGATTCACCAAGAATGTTTGTGATTAATgacttattagaaaataatcgAAATGTTGGTATATTGTTGTCATCTTCATCGGTATGTAATCAAGATAATAGTACACGAAATGTTCCTGATGTAGATATTATAGTTAATGACACAGTCAAAAAATCTAATTCTATATCAAATGAAACAGATGATGAAAAACAGTCCCAACAATGTGAAATTGAACAATTGTGTAATGGGAAAAAAGACGTTGTTAATATTGAATCTTCGCCAACATTGTCATCGacatcaatttcaaatattgttgatgaaaatttatgtgaacttattaaaaatagtattgtTGAACCTGTTTCTGTGTAA
- Protein Sequence
- MLRPFKSFLSNLQKNALGATIFGISPDMMNTTEEEEIVNNTVIFNNDEGVENDPLSDPLAIDDEIENQTDSANEYTSGNTTLTDLDSSTDGQIILIDVNSLKSSFSIPEEIVSYMPNSIELADSKENVTYVDNLELVDDTQKKTELIIEHNPIKLENHCIVNSLMKPQSNSNATATESNVINDDDIDGKYNPIPTTLVDDINEEVEGVRSDGSDSGLGLELSTALIAIEPNVPQLVLPVRSNLKRRSNSCDKSDIIDSKKPKRSIQFSGVTVYYFPRIQGFTCIPSQGGCTLGMGPHHYDERSFSMSEHSAEQKRIHRQQMQELNPRNCISSSVGNSTGGIDQSDTDESDSEEEVMSDNSGSELDTETNGFLQPVSQRQRRALLKAAGIRDISSYEKNDCRDIRTSREFCGCNCRDYCDPDTCFCSQSGIKCQVDRASFPCGCTQDGCGNVIGRIEFNPKRVRTHFIHTIMRLELEKKQKKADEHNTLNSYDGRLRLRGAGISSTVTTHSSVPAQQHQSNINELSNYNNEIVYTTAASSTTDEVDDQSISCNFNNNSHGNNIRNLSSTIIPESPLDLHYTFRNDYHLGTSSQPSQQIQQSNFLIYNNSQYYTPTANNTFNDFTLNHNNHSSHLLQNFSNYSSDGPYQGSMEVDGITDIIGVSTCANYINNYNDAIDGAVNINSALFDSGSVIEDVVSATLPITTIIPITVESESEPEPTDKILNKISQSCISNIDKDNHENDNNEINLVNLNPLKSDSPRMFVINDLLENNRNVGILLSSSSVCNQDNSTRNVPDVDIIVNDTVKKSNSISNETDDEKQSQQCEIEQLCNGKKDVVNIESSPTLSSTSISNIVDENLCELIKNSIVEPVSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -