Csub024523.1
Basic Information
- Insect
- Catotricha subobsoleta
- Gene Symbol
- Trerf1_1
- Assembly
- GCA_011634745.1
- Location
- JAABKK010000517.1:9884-26623[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-12 1.9e-09 38.1 0.2 2 46 1181 1225 1180 1225 0.96
Sequence Information
- Coding Sequence
- atgaatacgGTGCAAGGAGGACTTCGACTTCCTCTTACTGGCATTGCACCTCCAAGACTTCTTATGTGCAGTGCATCAATGGGTGCTGAAGGTTCGGTTACTCTACAACTACGTGAAGCTGTACAAGCGCCTGATACCGGAGTGCAGTTAGATGCAACGGCGCTAACTATCGGCTACCCAGATCCAGATATTTTAGCTGATATGCTTGGATCAATACAAGCTGCAGgaaCAGGTGACGTTACAAGCTTTGATATTTTAGATAGCAGAGATCAAGACATAACGAATGCCATTATTAACAAGCCAACACCAATCAACACATCTGTTGAAAGTGAGTCAGtattatccaacaacaataacaacaaaaatacaaacaacaacaataataatggcAACGAAAACACGGTTCTTGTACAAAATCCGCCAGTTGTAAAAAAAGCAAGGCCAAAAACAGCATCCCCTACACGACATGGCCCACAGCAATGCcaggtGTGTAGCAAGGTTTTTGGAAATGCATCAGCTCTTGCTAAACACAAACTAACACACAGCGATGAACGAAAATATGTATGTGGCATGTGCTCGAAAGCATTTAAAAGACAGGATCATTTaaatggcCATATGCTGACACATCGAAATAAAAAGCCATATGAATGCAAAGCTGAAGGTTGTGGTAAATCATATTGTGATGCAAGATCATTACGTCGACATACTGAAAATCATCATAGTTCATTAGCAATGACCCCAACAACACCAAATCAATCATTGTCATCTTCTACCGGACCACCTACCGGATTAAGCTTATCGCCTGCCACAGCCAGCGgtGATGCAAGCTCACCCCATGGTGCCAattgtatacaatttaatggtgaTGGATCGAAACCATCTTCGCCTAGCTCTCCAGCTGGTGCTGGTAATGAAGGACTGACGCGTCAACAACTTGATCTCATAAGTCAAATTATGCAACAAACAAAACAGGCTAATGCTGGTCTAACAGCTGCTGCTGGTCAAAGACAAACACAAAGACCAAGAACATGGAATATGCAGACACAATTACAACAAAACCAGTCTAAATTGTCACCAAATTCAGATAGTTTAAGTGCGTCATCATCGAACTTACAAAATGCACCAAAACTTGAACAGAAGCCAGTCGAGTGTAATTTATGTCATCGAAAGTTCAAAAACATACCTGCACTTAATGGTCACATGAGATTACATGGAGGATACTTCAAAAAAGATGCAGAAACTAAGAAATGTGATAAAAAGGAAACTCCCGGTCCTCCACTACAAACAGCTAGTGTTGGAATAAGGGCgttaattgaagaaaaaattataagtaaacgAAGTAAAGATTTAaagggtGCTTTTGTTGTGCCATTAGCCCCGCCATTAGGTACACGTCGTATTTCGGAAATTGATAACTTTGTCACACCGAAAACACCAACATCAATTAGTACACCAATTCAAGCGACTATTGTTACTTCTGGAGCATCACAAACCGCAACCATAACACATATATCACCATCTATGACAACAATTGCCGCAACTGTACAATTACCAGCAAACATACATAAACATTCATCCATTGAAACCAAAGATGCAACATTAATAGAGCTATTAAAACGTGGAACTAAAGTAGCTGTTAAGCGAGCTTGTTCTGATCCTGGTCAACTTACATATAGTCAATCATCAACTCAGACCACAACCGTGTTATTACCTTCACATACATCTTTATCGTCAGCTATAACACCCACATCAACACCACCGTTAGCAATTTCCTTATCTGGAACTAGTGCATCATCAACACCTCTTGCACTAACAATATCTCAGGCCCCAACTGATTCTGGGGATGTTTATACTTTGGCTTATTCGACAGATACATCAACAGcattttttagtgaaaatgaTGTGTACAATGTTCCGGATACAGCCATGCTTTTACAAGCAGTTGATTCCATTCAGCTTCTTCACAATTCCACAACGAATGGCCAACTAGATGAATTAACATCAATAAGTGATTACACATTATCCGAAAATGGTGATCTAAATGAATCAGCAATTCTTACACGATACACTCCATCGCGACAAATTCAAGCTGTTCTAAATTCACCACTTCCAGAAAGCCTTGCCGAATTTAGTACACTTCATTCCAAAGACTTTGTATTATATGGATGCACGAATACTCAATCACCAAACACGCAATCATCGGGATCACCACTTCCTTCACCATTATCCTATCCAACGCCTCCAGCTAGTCATGAGGGTGTTGCACAATCCTCACCTTTTCTGGATGATTCACATCATTATTTGGATGCTAATTCATTCTTTGACGacaagaaaaacataaactttTTGGAAGAAAATAGTGGACAGTTTTTCAAGGATCCTAAAGACGCACAGCTATCTGATAGcgaaagaattttgaaattgaaaaatgagcTTTTTAACGATTCAAAATCGGTGATGGAagatagtatatattttaaaacagaaCCGAAAGATGTATACGAAACTAAAGCATCTGATATATTGGCGGAAAACAATAATCATAATGAAAGTATTGttgaatttaatcaaaatttatcctTTCTCGATGAACCGCAAAATTTTTTGGACGATGCACGAAATACATCTTCGCCTTTATCGGCTGCCTTTTTTACTGGTACAATGTCTAGTGCCGAGGAAGTGAAAGAAGCGCTGGAAGAAGTTCttccaaatgaaaatattccatGTGAACAgacaaatgaaaatgacattGATCTCTATTATTTACCTGCCTTGGCACTACAATCACAAATGATGTTAAACTCAGACGATCCTCTTTTGTCATCGTCACCAAAAGATTTCGCTAACAAACAACAAGTacacaaatttgattttaatttgttctGCGCGCCAAATgccaaaaaaccaaaaattgaaattaacaatGATGATAACAAAAAGCCCTTAACGTTACAAACCGAACAAAttccaaatgaaatattcCTTAGCCCGTCCAATCTATCATCTAATGCACCATCGCAATCACCAAAGTCAACACATAGTTcggttattttgaaaaaacgtCAACATCATAATCTAAATATACGTAAAACTTTCACCTACAAGTCAAAATTACGTAAATCCTCCTCTACACATTATACCCCATCTCCTATTTTGAATCCAGATCGTTCAGCTCCCGGATTATATGCATCAATATCGAAAGATATGCTAGAAGatgttattgattttgattttacggATACAACATGTGTACCagaatttgtagaaaaatctAAAGTAAATATTGGTTCTGATTTTCAAGCAATAATTCCATCACATTACACTCCCGAAACATCTAATTCCTACGATCAACAATTATGGAATCCTAATGTTCTACAAAATGAACGTCAAATTCAAAGATTTGTTGATTTAGCAAAATCATCAGCAGTACCATTGGGCTGTCATTCAGAAGAAATGGCGTTGAAAGCACTACAGGAAGCTCATGGTGAAACACACATTGCTATATTAGCCATGTTACAAACCCCACCAACTTCTATACACAAAAGATGGTTACAACAAGAAATTGAAGTGTTCTTGAAAGGATTAGAAGAGTATGGAAaggatttttacaaaattgctAAAGAGATCCCTAATAAAACTGCAGCTGattgtatacaattttattacttcTGGAAAAAACTCTGTGTGGACTATAAATTTACTCATTTAAATACCGAACAGGCGGTTCCTGACGGCAATTCTGGACATCAACAGACTTCCACTATACATGAAGTACGTCCACACGTTTGCGAAATGCCCGATTGTTCAgctagttttACATCAAAAGCAGCATTACATGGTCATACTAGAATTCATTGCATTGGTCGCAATATAAACACtattcaatcaaataataacGGACCTCTGTTGTCAGGTACTTCACATACTATAACCGCAAAGGATGATTTTCCCTGCAAGGTGTGCGGCAAGGTATTCAACAAAGTGAAAAGCAGAAGTGCACATATGAAATCACATCGGCCTCAGGACTCGGATACGagcacaaattaa
- Protein Sequence
- MNTVQGGLRLPLTGIAPPRLLMCSASMGAEGSVTLQLREAVQAPDTGVQLDATALTIGYPDPDILADMLGSIQAAGTGDVTSFDILDSRDQDITNAIINKPTPINTSVESESVLSNNNNNKNTNNNNNNGNENTVLVQNPPVVKKARPKTASPTRHGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCGMCSKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSSLAMTPTTPNQSLSSSTGPPTGLSLSPATASGDASSPHGANCIQFNGDGSKPSSPSSPAGAGNEGLTRQQLDLISQIMQQTKQANAGLTAAAGQRQTQRPRTWNMQTQLQQNQSKLSPNSDSLSASSSNLQNAPKLEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAETKKCDKKETPGPPLQTASVGIRALIEEKIISKRSKDLKGAFVVPLAPPLGTRRISEIDNFVTPKTPTSISTPIQATIVTSGASQTATITHISPSMTTIAATVQLPANIHKHSSIETKDATLIELLKRGTKVAVKRACSDPGQLTYSQSSTQTTTVLLPSHTSLSSAITPTSTPPLAISLSGTSASSTPLALTISQAPTDSGDVYTLAYSTDTSTAFFSENDVYNVPDTAMLLQAVDSIQLLHNSTTNGQLDELTSISDYTLSENGDLNESAILTRYTPSRQIQAVLNSPLPESLAEFSTLHSKDFVLYGCTNTQSPNTQSSGSPLPSPLSYPTPPASHEGVAQSSPFLDDSHHYLDANSFFDDKKNINFLEENSGQFFKDPKDAQLSDSERILKLKNELFNDSKSVMEDSIYFKTEPKDVYETKASDILAENNNHNESIVEFNQNLSFLDEPQNFLDDARNTSSPLSAAFFTGTMSSAEEVKEALEEVLPNENIPCEQTNENDIDLYYLPALALQSQMMLNSDDPLLSSSPKDFANKQQVHKFDFNLFCAPNAKKPKIEINNDDNKKPLTLQTEQIPNEIFLSPSNLSSNAPSQSPKSTHSSVILKKRQHHNLNIRKTFTYKSKLRKSSSTHYTPSPILNPDRSAPGLYASISKDMLEDVIDFDFTDTTCVPEFVEKSKVNIGSDFQAIIPSHYTPETSNSYDQQLWNPNVLQNERQIQRFVDLAKSSAVPLGCHSEEMALKALQEAHGETHIAILAMLQTPPTSIHKRWLQQEIEVFLKGLEEYGKDFYKIAKEIPNKTAADCIQFYYFWKKLCVDYKFTHLNTEQAVPDGNSGHQQTSTIHEVRPHVCEMPDCSASFTSKAALHGHTRIHCIGRNINTIQSNNNGPLLSGTSHTITAKDDFPCKVCGKVFNKVKSRSAHMKSHRPQDSDTSTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00285809;
- 90% Identity
- iTF_00285809;
- 80% Identity
- iTF_00285809;