Csub007463.1
Basic Information
- Insect
- Catotricha subobsoleta
- Gene Symbol
- SMARCC2_1
- Assembly
- GCA_011634745.1
- Location
- JAABKK010007667.1:7504846-7509368[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-14 3.5e-11 43.7 0.2 3 44 717 758 715 760 0.95 2 2 7.9 1.4e+04 -3.1 0.0 5 18 979 992 977 993 0.84
Sequence Information
- Coding Sequence
- ATGGTGTCTTTGGGACCTAAAAAAGACGGTGGTCCAAACGTTGAATTCTTTCAATCACCTGAATCAATGCAAGGATTTGAAATAATACGACAATGGTTACAAAAGAACTGTCGAAAGTATGTGCAAGCTGATCCACCAACAAAAGAATCATTATCGCAATTGCTCATACAATTCATTCAATATCAAGAAACGAAATTGGGTAAAAGTGCTGGTGATCCACAATCGACACGTTTACCGATGCGCTgtttaatggattttaaaCCGGGCGGTAGTTTgtgtcaaatattttcaaatatgtatcgCTATAAAACCGATCAGCGTTGGcgtaaatttgaatttaatgtaaCAAAAGCGCAATCACGCAAAGATAAAGATCCAAATACACAATTATTGGTGGACATTGAAACAGCCTTAATTGAAGCCGAATGTTTACGATTACCAGTTGTATTCATACGTCCAGAGGTTGACGATGAATTACGTGAACGAATTTCGCTAATTGTTAGCAATCATCAAGGTGAAATATCTGAAGATGAAGAAGAAGCCACACATATTGTTTATCCAGTTGTTGATCCATTGCCAGAAGATTTTGCACGGCCAACATTTCGACGtggcaaaaatattatgattcaTTGGTATTATTTTCCGGAATCGTATGATTCGTGGGTGCCAAATACTTTTGATTTGCCGGATAATGTTCCAGATAATATTGGTTCACCACAAGATGTTTGGCGTGTATCAGCTTCATGGGTACTTGATTTACACGATTATAATGAATGGATGGCCGAAGAAGATTATGAGGTTGATgaaaatggaaagaaaaaagtCCATAAGCTACGTTTATCAGTGGAGGAATTAATGCCATTGGATGATAAACGTTCATCGTCTAAAAGTGGACATTTAGCTGGTAGCAGTGGAACGGGTAAACAAAGTAAACGAAGACGTTCACCATCACCACCACTTAAGGGTGGCAGTAAACGTAAAagTGGTCGATCGCCAGCAGTTATGCAAAAGAAATCTCGTGGCATTGATATCGATGATGACGAAGATTTGACACGTGACATGGATGATCCTCAGCCAGAGCCAAACATAACCGAAGTTGTATCAAAACAATCGGTTCATAGTCCAGCAACACCATCAAATACTAAACAACGTGGCAGTGGAATTGATTCCGATATGCTACCATTAAAAAGTAGCATGGTAACGGATTTAGATGATGAAATGGAACGTAGTGGTGGCAGTGGCGGACAAAGTGTTGGACAAGGTGGTAATGGGGGTAGTGGAACAGCTGGCGGTGGAAATGGTGATGATTCACAAACTGGAAAAACCAGCGAAAATAGTAACACCCAAGAATTTCCACAAAATCGTGATGATCTTGAAGATAATGTGACTGAACAGACACATCACATTATCGTGCCATCGTATTCAGCATGGTTTGattacaattcaattcatgTTATTGAGAAACGTGCTATGCCCGAATTTTTCAAtggcaaaaataaatcaaaaactcCAGAAATTTACATggcatatcgaaattttatGATCGATACATATCGATTGAATCCAACCGAATATCTAACAAGTACAGCGTGTCGTCGTAATTTGGCTGGTGATGTGTGCGCTATAATGCGTGCACATGCATTTTTAGAACAATGGggcttaataaattatcaaattgatGCTGAATCACGTCCAACACCAATGGGACCACCACCAACATCACATTTTCATGTGCTCAGCGATACACCATCCGGATTACAACCGGTTAATGCACCGAAAACTACGCAACCATCAGCTGCAAAAGCATTATTCGATttggataaaattaaaaaagagaaagaagGTATTACAGCTGAAGCATCACCAAATCCTTTACCGGCTGTAACTACGTCGGCCATCACATCGTCAATACCATGTTCCACAACAACTGCTGCAGGAATTGTCACTGCACCTCCATCTACAGCATTAACAACTATAGCCGGAGTTACCCCAGTTTCATTACCATCAATTGCTGGTGTTGGTGTACCATCACCCGTAATTAAATctgaaaatacaattgaacCGGGCGCTCAATTTGGCTTGAAATTAGATCAATATGCTAAAAAGCCAAttgcaatgaaaaataaaactgctgCTGGTCTTGCACGTGAATGGACCGAACAAGAAACCTTACTATTACTCGAAGGCTTGGAAATCTATCGTGATGATTGGAATAAAATCTGTGAACATGTTGGCACCCGAACACAGGATGAATGCATATTACATTTCTTGCGTTTACCAATTGAAGATCCATATTTAGAAGATGATGGTGGTTATTTAGGACCACTTGCTTATCAACCGATTCCATTTAGCAAATCAGGCAATCCAATTATGTCGACTGTTGCATTTTTAGCATCAATTGTTGATCCACGTATTGCGGCGGCCGCTGCTAAATCAGCTATGGAAGAATTTGCCTTGATCaaggAGGAAGTGCCACCCAATGTTTATTATGCGCACTATCGAAATGTTGAGAAATCAgttttaaatggtaaatttgATCCAACTGCCGGACTAACAAGTAGCGGTATTGCAGGAACTGGAACAGATAAAGATGACGATGATGGAACACCAGCTGCATCGAAATCAGCTAATGTCGATGAAGAAATGAAGGATAACGCCAGAAAGGATGGAGATAAACCATCACAAGATGAAACTAAACCAAGTGATTCTTCCAATAATCCAGCAGCAACATCGTCAACAGCCGATCCAATGAAAATGGATACAACTGAAAAATCAGATGTTGATAAGGCCATTGAAATTTCTGGCGAAAATGGGCCAATGAATGGTAACGATAAAGATGCCGATGAAAATAAtcgcaaattatttaatgaaactgATTTACAACGTGCCGCTGCCGCTGCATTAGCATCGGCTGCCGTTAAAGCTAAACATATGTCAGCATTGGAggaacgaaaaattaaaagtttggTGGCACTGCTGGTGGAAAcgcaaatgaaaaaattggaaataaaactGCGTCATTTCGAAGAATTAGAAACAACGATGGAACGTGAACGTGAAGGTTTAGAATATCAGCGACAACAATTGATTACTGAACGGCAACAATTCCATTTGGAACAATTAAAAGCAGCTGAATTCCGTGCAAGACAACAAGCACATCATCGTTTACAGCAGGAACAGCAAGGACAATGGCAGGTGGGCAGCGCTGTTAGTAGTGCTGGTTCAACAATTATTCCACCAGCTATTGCAACTGTACCAGTCACAGTTAATGCTATTCCACCAACTACTGCTATTCCAAATAATAGTATTCCAACTAGCATTCCAAATGCTACATTCACAAATGCAACAGTAACACCACCAGCTTCAATATCACCAACTGTTCCGGCAAATATTGCAgttccaactgtaacaacaacaacaacaaccgcATCAGTGACATCACCAAGTGCTGTATCTATTCCGAATGAAACATCAACAACCACATTAGCGACCCCATTAACAACAATTCCATCATCACCAGCTGTTCAATCACCATCACCATCAACACCAACAACAGCAATAGCAACAGCAACATCTCCAACCAccattattacaaatattgtgTCACCACCACAAGCTTCACCGCATGCTCAACAGCCACAATTGGCGGCACCGTCGTCAACACCTGCAGCACCATTAACATCTGGAGTTCCACCCGctccataa
- Protein Sequence
- MVSLGPKKDGGPNVEFFQSPESMQGFEIIRQWLQKNCRKYVQADPPTKESLSQLLIQFIQYQETKLGKSAGDPQSTRLPMRCLMDFKPGGSLCQIFSNMYRYKTDQRWRKFEFNVTKAQSRKDKDPNTQLLVDIETALIEAECLRLPVVFIRPEVDDELRERISLIVSNHQGEISEDEEEATHIVYPVVDPLPEDFARPTFRRGKNIMIHWYYFPESYDSWVPNTFDLPDNVPDNIGSPQDVWRVSASWVLDLHDYNEWMAEEDYEVDENGKKKVHKLRLSVEELMPLDDKRSSSKSGHLAGSSGTGKQSKRRRSPSPPLKGGSKRKSGRSPAVMQKKSRGIDIDDDEDLTRDMDDPQPEPNITEVVSKQSVHSPATPSNTKQRGSGIDSDMLPLKSSMVTDLDDEMERSGGSGGQSVGQGGNGGSGTAGGGNGDDSQTGKTSENSNTQEFPQNRDDLEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNGKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRAHAFLEQWGLINYQIDAESRPTPMGPPPTSHFHVLSDTPSGLQPVNAPKTTQPSAAKALFDLDKIKKEKEGITAEASPNPLPAVTTSAITSSIPCSTTTAAGIVTAPPSTALTTIAGVTPVSLPSIAGVGVPSPVIKSENTIEPGAQFGLKLDQYAKKPIAMKNKTAAGLAREWTEQETLLLLEGLEIYRDDWNKICEHVGTRTQDECILHFLRLPIEDPYLEDDGGYLGPLAYQPIPFSKSGNPIMSTVAFLASIVDPRIAAAAAKSAMEEFALIKEEVPPNVYYAHYRNVEKSVLNGKFDPTAGLTSSGIAGTGTDKDDDDGTPAASKSANVDEEMKDNARKDGDKPSQDETKPSDSSNNPAATSSTADPMKMDTTEKSDVDKAIEISGENGPMNGNDKDADENNRKLFNETDLQRAAAAALASAAVKAKHMSALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQGQWQVGSAVSSAGSTIIPPAIATVPVTVNAIPPTTAIPNNSIPTSIPNATFTNATVTPPASISPTVPANIAVPTVTTTTTTASVTSPSAVSIPNETSTTTLATPLTTIPSSPAVQSPSPSTPTTAIATATSPTTIITNIVSPPQASPHAQQPQLAAPSSTPAAPLTSGVPPAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -