Csub010258.1
Basic Information
- Insect
- Catotricha subobsoleta
- Gene Symbol
- Snapc4_1
- Assembly
- GCA_011634745.1
- Location
- JAABKK010007667.1:38978313-38982262[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.9 5e+03 -1.7 0.0 11 43 206 245 204 248 0.62 2 5 3.6e-11 6.3e-08 33.2 0.1 1 46 254 300 254 300 0.96 3 5 1e-10 1.8e-07 31.8 0.1 3 43 310 354 310 357 0.97 4 5 6e-11 1.1e-07 32.5 0.0 2 46 364 409 363 409 0.93 5 5 4.1e-11 7.2e-08 33.1 0.3 3 46 417 461 415 461 0.96
Sequence Information
- Coding Sequence
- ATGTTAATTGGTCAAGTGCTTTTGAAAATtctaagaatattaatttcattgtggTATGTTGTATTGCTTGGAGATTGTCAGGAAATAGAAACAACCTCGGCGTATGATTATGTATCGGAagcaaaagaaattatttatacttatgaTGATATTACATTAGAAAATGCTttgctatttaataaaaagcttCAAGAGCATTTACAAAGTCTGAGAACCACACtggaaataatgttaaaagaaTGCCAaacgaaatacaaaaataatgaaaatattttaaaagaactgTCCACCCAATCACTATCACGccttaaattttcttatttcttttgtggttatccatttttcaaaaatcgtgATGCCTTTCCAGCACCACCCACCTCTGATTATTTATATCGGCgaaattcattaaaagaattatttccaATTGACTTGGATGAAAATCGCATTTATTGGGTGGCTCgtgataaaattcatttaattcagggtgtcaaaaaacaagtattggattatttatatgtcaaaaataaggATAAACTACGTAAAATTGGACCAACAAAAAATGCCAGTGAATCAATTGCTGTTATTATGCGAgataataaaagCTTGGCAACAAAACAATTGGCCCagttatttgaaaaagttcaagaagataaatttttaattgattggtTTACAATATCCACAAGAGAATTAGATGGACGACATAAACCCAATGAATGCATGGGaatgtgGTATGGATATTTAATGCCAAATCTAAATCGTAAGGAATGGACAGAAATGGAAGAAGATCAATTATTAGGTGTTGTTGATTTATATTCAGCACAGAATTGGACTGAAATTGCAAAACAAATAACTGGCCGTTCGGCGTATCAATGTTTAGTTCAATATCAAACGGTATtgagtgaaaaaaattatatgaaaaatatacgaTGGGCTAAAGAAGAAGATAATCTATTGCTTGAAACAGTGGAAAAATATCGTATTGGCAATATAATACCGTGGACaaaagttttagaaaaaatgcCAGGTCGATATAAAgctcaaatttataatagATACATGTTTAGTTTAAATCCACAAATTAATCATAATCGATTTACAACTGAAGAAGACTGTATCTTAATGGCAGCAATAAAAGAATATGGTTCAAATTTTCAAGTATTTCCACAGAATCTATTACCTGGTCGTAGTATTGTGCAAATACGGAATCGATATAATAACGTATTGAAATTTGTTGGTAAAAGTAAACATTGGACAGCTGAACATGATAAACATTTGATGCAATTGGTTGAGTGTTATGGCAGCACAAATTGGGCAAAAATTGCTCAGGaaataatatatcataatCGATTTTCGTGTCGATCTCgttacaatacaattttaaaatttttaaaaaaatatccaaatagTACAATAGACGATGTACCACGAAGAAAAAAAGCATTCTCATCAAGTGTTACCGTTGATAATTGGATGGAaactattattaaagaaaagcAGAAAGATAAGTTTACTGATGAAGATGCATTAGAAGTAAATGCTTCGAAAGAAGAACGTCGtttaaatgcaattataaCAAATGTCCAAGGTAaagaatattatgattatttcaaatattcatatGATTTTCGATTTGGTGATCGACGTATACCGCCTAATTTAAAAGAACTTCAATGGTTACGTATTATTTGGCAATTATTGAATGGAGAAATTGACTTAGATGCACATTATTTGGGCCATACAATCAGTGACTTTGTTTGCTTACTAAATTTAGGAAAAATGAAAGCACAAAATTTAGAACTTTTGAAGTTAATAAATGAccgtaaaaatgattttcaatttcctGCTAACTTACGTAATGTATTAGCTCTTCGTGGATGTGTGATTATGTTCGAGTGTCAAGAACTTTTAGAATTTGATGCGGAAGCCGAAAGAAAACCACTTTCGAAAGaaaattctatagaaaattcatcaagcaataaagttttatatttaaaaaataaaaatgacgaAACCgaagaatttaatgaaacagTAACTGATAAACCGTCATCAGAAGCTGCAATCGAACTGTTCAAAAAGCGTTTCTTTTCGTTATTTCGATATCCAGCAATGCTTTCAAAAATAGCAGTACCGCTTAGAATTCAATGCAAACCAATTGGAAGTGAACCAGAAATAATCGTTCCAAACGAATCCACTAATTTGCAATCATACCAAATGTCTACCAAccaattattacaaaaaccaaataattttacttctgaaattttttctgAATCATTGCCTCAAGATACTGTAACTGACGAGgatattaatgtttatagtTGTTCCGCACATGGAACAATGACACaaaattcagaaataattGATTACACGATTGAAACAATGAATGgcacatttaatataacattGCAAAATGAAGACTATGATCAAGCTAAAAATCGAGAAAAttctaatgaaaatattgttacaaTTGAGAATGACTCCgttgatattaataaaaaaccaaaaataaaattggaaaatacccccaaaaataaaaaacggaaaaatgaaACTACAGTTATAGTTGAAGATGACTCCGttgttattaataacaaaaaatcaaaaattatatacaaaaatacaaaacgaaaaaaagaaacagttGTAGCTACAGCaccacaaaaaaatgtaaaatgcggtaaatattaa
- Protein Sequence
- MLIGQVLLKILRILISLWYVVLLGDCQEIETTSAYDYVSEAKEIIYTYDDITLENALLFNKKLQEHLQSLRTTLEIMLKECQTKYKNNENILKELSTQSLSRLKFSYFFCGYPFFKNRDAFPAPPTSDYLYRRNSLKELFPIDLDENRIYWVARDKIHLIQGVKKQVLDYLYVKNKDKLRKIGPTKNASESIAVIMRDNKSLATKQLAQLFEKVQEDKFLIDWFTISTRELDGRHKPNECMGMWYGYLMPNLNRKEWTEMEEDQLLGVVDLYSAQNWTEIAKQITGRSAYQCLVQYQTVLSEKNYMKNIRWAKEEDNLLLETVEKYRIGNIIPWTKVLEKMPGRYKAQIYNRYMFSLNPQINHNRFTTEEDCILMAAIKEYGSNFQVFPQNLLPGRSIVQIRNRYNNVLKFVGKSKHWTAEHDKHLMQLVECYGSTNWAKIAQEIIYHNRFSCRSRYNTILKFLKKYPNSTIDDVPRRKKAFSSSVTVDNWMETIIKEKQKDKFTDEDALEVNASKEERRLNAIITNVQGKEYYDYFKYSYDFRFGDRRIPPNLKELQWLRIIWQLLNGEIDLDAHYLGHTISDFVCLLNLGKMKAQNLELLKLINDRKNDFQFPANLRNVLALRGCVIMFECQELLEFDAEAERKPLSKENSIENSSSNKVLYLKNKNDETEEFNETVTDKPSSEAAIELFKKRFFSLFRYPAMLSKIAVPLRIQCKPIGSEPEIIVPNESTNLQSYQMSTNQLLQKPNNFTSEIFSESLPQDTVTDEDINVYSCSAHGTMTQNSEIIDYTIETMNGTFNITLQNEDYDQAKNRENSNENIVTIENDSVDINKKPKIKLENTPKNKKRKNETTVIVEDDSVVINNKKSKIIYKNTKRKKETVVATAPQKNVKCGKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -