Csub018276.1
Basic Information
- Insect
- Catotricha subobsoleta
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_011634745.1
- Location
- JAABKK010000767.1:7050146-7052515[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-17 7.9e-14 51.7 0.0 1 45 11 56 11 56 0.96 2 2 7.6e-19 1.6e-15 57.1 0.0 1 43 439 482 439 484 0.95
Sequence Information
- Coding Sequence
- ATGTCAACTGTGGCTGGCCGCAGAACATATACAGAGGAAGAACTTCAAAATGCCCTACAAGATATTCTCAGTGGCAAACTTGGAACTAGACGAGCCGCAGTACTCTATGGTATACCACGTTCAACGTTACGTAACaaagtatataaattggcGATGGAGCAAAAGCGTGAAGCATCTTTATTACCTCAAGCTACTGTTTTGGATGCATTAGAACAAGATGATGAAGAAAAAGAGTTATCAGGATATGAAGATGAAAAAGAACTAGATAAACCATCAAATAGATTAATGCTTACACAAGAAGATATGTTGCGATTGTCATCAGCCAGATCGACAATGACAGCAGCAGCCTTACAAAAATATGGACAGTTGTATGAAAATACTAGTCCGAAAATAGATTCTTCTTATAAAGAACAGCATCAACAACACCAATCACAACATAAATCGCAAACAACACCTACAACTCCTCATACACCACCAATAGCAAATAATCCATGGCTTGATCCAgttatgtttcaaaatttaattttagcggGTGGTCTAATGCAGCAAAAATATGATGATCCAGCTTTTCAAGAACTGTTTAGAAACTTATTGATGCAACAACAGGAATTGATGAAggaacaaatgaaaaattcagtTGCAACAACAGCAGATGATCATCTTAATAATGGAAAACCTACAGTCCCAGACACAAGACATCTTATGCATAATTTATCAGTACTGCAACATCAACAgcaacaaattcaaaatagacTAATAAAGTCCGAAACACCAGATCCCGCCTCAACAGCAGATTTAAATGATGGTAGTGAAGACTCTGCtgtgatattaaaaattccgTCCTTTAAGCCCGTTGCAGGGTCTTCATCTTCATGTGGTAAAAATGGCGATAATATTAGCGATTCAACTCCCCAAACAACACCTCCACTACATTCAAGAAGTCCACAAACTCACTTGCCCCCTGGTATTTCCCCACCTGTGATTAGACAAAATAATGAATCCCAATCACCACCGATGAGTATAGGCGGCAAAGGGATATTATCCTTACGAGATGTTATAGCCAAAAGTATAACTAGAACATTTAATCAGCAAAATCCAGATACAATTAGTACGCCTTCCATGGATCAATTAGAACAATATAAAAGGCCAAGTATATCagtgattaaaaatttaggtGGCACAGATATGACTCGATTTGGAACGAGTCCTAATATGATGGGATCTGTTAATTCTAACAACTTGAATTCACAGTCTGGTGGGAATAATAGTGGGGGTAAAGGTACTCGCCCAAAAAGAgggaaatatagaaattatgacAGGGATAGTTTGGTTGAGGCAGTAAAGGCAGTTCAAAGAGGCGAAATGTCAGTACATAGAGCTGGAAGTTATTACGGGGTACCACATTCAACATTGGAATATAAAGTTAAGGAAAGACATTTAATGCGACCACGAAAACGTGAACCTAAGCCACAACCACTCGATGGAACTGGTACCGGTTCATCCACAGCCAGTATTAAAACTCACGACATTCCTGGATCAGCTGCGGGTATACGATCAATAGATAAAAGTAAAAGTCTACCAACAGCTAAACCACCAATAAAAACCCCACCATTTCCAGCCACATCCCCCAATGGACTAAAAATTGGATTATTTGATCCTGCTCAATTGCAATATCCACCGCATTTATTCTGGCCTCATCCACCGGGTTATACTGGGCTGCCAATGGACTTTGCTAGAGGTACATCTGGTACTCCTGCAACATTCCCAGCAAATGCTGAAAGTTTTTTTGCATCACAAATGATGCAACGATTTCAAGAAGATGCTATGCGACAAAATAATGTGAATAACGCTGTAACAAAAGCAACAGGCTCATCAACAGCTACTGCTGGATCTTCTACACCATCAAATAACAGTCAAGCAAAGAGTGCACGTGAAATAGCCGAGAGCCTTTACGACGGAACAAGTGCGAATGGGTCATTTTTAGATGGCATTATTCGTCATAGTTTGGATAGAAAAGCCGGCGATTCAATTCCACATGGTGCCCTCTTAGAtcaattagttaaaaataatagacaTTCGATTAGCGATGGTGATTGTAGTAATAGCAACAATAAAAGACCAGGAAGTCCTTTTAGTTATGCTCATCATGGTATTAAAAGGGAACGTGCTAGTTCGTCTTCAGGCGATACTGACAGAGATTCTATCGAACGTGACATATCAAAGGAATCTGTTGAGACCTTACTTAAATATCGTGATGGTCTTTCACTCAGGTTAGATGATAAAGGACTCAGAAGCTCTACTGAAGATTTAAATGGGGCATCACCTGATAATAAAATGTCACATCATACAGAAACAGAAGATAGCTCATAG
- Protein Sequence
- MSTVAGRRTYTEEELQNALQDILSGKLGTRRAAVLYGIPRSTLRNKVYKLAMEQKREASLLPQATVLDALEQDDEEKELSGYEDEKELDKPSNRLMLTQEDMLRLSSARSTMTAAALQKYGQLYENTSPKIDSSYKEQHQQHQSQHKSQTTPTTPHTPPIANNPWLDPVMFQNLILAGGLMQQKYDDPAFQELFRNLLMQQQELMKEQMKNSVATTADDHLNNGKPTVPDTRHLMHNLSVLQHQQQQIQNRLIKSETPDPASTADLNDGSEDSAVILKIPSFKPVAGSSSSCGKNGDNISDSTPQTTPPLHSRSPQTHLPPGISPPVIRQNNESQSPPMSIGGKGILSLRDVIAKSITRTFNQQNPDTISTPSMDQLEQYKRPSISVIKNLGGTDMTRFGTSPNMMGSVNSNNLNSQSGGNNSGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGTGTGSSTASIKTHDIPGSAAGIRSIDKSKSLPTAKPPIKTPPFPATSPNGLKIGLFDPAQLQYPPHLFWPHPPGYTGLPMDFARGTSGTPATFPANAESFFASQMMQRFQEDAMRQNNVNNAVTKATGSSTATAGSSTPSNNSQAKSAREIAESLYDGTSANGSFLDGIIRHSLDRKAGDSIPHGALLDQLVKNNRHSISDGDCSNSNNKRPGSPFSYAHHGIKRERASSSSGDTDRDSIERDISKESVETLLKYRDGLSLRLDDKGLRSSTEDLNGASPDNKMSHHTETEDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -