Csub026620.1
Basic Information
- Insect
- Catotricha subobsoleta
- Gene Symbol
- -
- Assembly
- GCA_011634745.1
- Location
- JAABKK010014619.1:1-1227[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-08 7.8e-05 23.6 2.4 2 88 4 103 3 104 0.74
Sequence Information
- Coding Sequence
- ATGATGAGTGAAGaagagttttataaaaattacacaaaattttataaagcgTCAAGTCCCCGAAAATacgatttattgaaaaataggaATTTTCGTATTACAGTTTTGTATCAAAACATcacaatatttgaattttatcatGTAACGGAAAAATATGGTGGCtacgattttattaaaaagactCGAAATGCAAATAATAGAGAGACATggaaaaagatattaaacgaattaaatataaatgcgcATTTGGACAGAAacttaaacaaaattcaatttctgtatcaatataaaaaatatttgttcgactttttaaaaaataattttgatcacGACGATGATGACAGTAATAGTGATCACGGCAATggattaaattctgattgctgtgaagaaataattttgaaattaaatgagaaaaataaagaagtgGAGCAACTATTAAGTGAGAATCAGGACCTCAAATTACAagttaatcaattaaatgtgGAAAAAGAGTTAAccagaaatttgaaaaaaGAAATCAATGATGTTCGAAAtgagaaaatcaattttcagaaAAGAAGTAGAGAATCGACGTTCGCAtctgaaatgaataattttaaaatgaagaaacTGATCAGTTCAAGTGAAAGTAAAGACAAAGAAATTGCGGATTTAAAGAAGAAACTTCAAGACCTTGAAAACGTGAATACT
- Protein Sequence
- MMSEEEFYKNYTKFYKASSPRKYDLLKNRNFRITVLYQNITIFEFYHVTEKYGGYDFIKKTRNANNRETWKKILNELNINAHLDRNLNKIQFLYQYKKYLFDFLKNNFDHDDDDSNSDHGNGLNSDCCEEIILKLNEKNKEVEQLLSENQDLKLQVNQLNVEKELTRNLKKEINDVRNEKINFQKRSRESTFASEMNNFKMKKLISSSESKDKEIADLKKKLQDLENVNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -