Csub013675.1
Basic Information
- Insect
- Catotricha subobsoleta
- Gene Symbol
- -
- Assembly
- GCA_011634745.1
- Location
- JAABKK010000077.1:1736968-1738820[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-10 3.4e-07 31.2 1.5 5 88 12 109 8 110 0.73 2 2 0.95 2.4e+03 -0.4 0.8 6 36 155 184 150 254 0.56
Sequence Information
- Coding Sequence
- ATGAATGTGGAGGAAGTTTTAGCTGAACCGGAATTTTACAAAACTTATTTAAGTTTATGGATGGCTTCGGGTTTCCCCAAAAAATCAATGGAACGTCTTCAGAATAATAACTAttgcttaaaaattaatttgaagcgCATcagtttatttgatttttataaaatcacagAAAAATATGGtggttataaatttattaatgatttgaaaataaatgagagtGTTAAGAAACCATGGTTAGAAATGTTGAAGGAATTTAACATTCAATCGAAACacaagaaatttaaaacacaaatcgtaaagcaatataataaatatttgcttcaTTTTGCAACGAAAAATTTGAGTAACGATGCTGAAGTCATGTCAACTGATGATGAAAATTGTCAACAAAATTTGGCAAACGAAAATGCTGATAAGGAAGACATCGATCGGATATCGTCACTAAAGCatgttcaaaaattaatggaaaaattggaaaaatcaatgaaagaaacagaaaaattattccaTGAAAATCAGGAGCTTCAAATTCAAGTGAATAAATACAAGATGGAGAACGAAATTGTAATCAATTTAAGAAATgaaAGTTCTGCTTTTCAAAAGGAGACCAacgatttgaaaaaaagatgTCGAGATTTGACAATCGCCTGTGaagtaaatgattttaaaatcaatttgctGACAACATTGAATGAAAGCAAAGAagctgaaattaaaacattaaaggaaaatgATTACgaggaaaaattaaaaaattatgaaaaaaaattaagaaatgttgatgaagaatttgaaaaattgagaGAGATGCTGAAtgccgaaaataaaaatcgtctttttatgaccaaagtaattttataa
- Protein Sequence
- MNVEEVLAEPEFYKTYLSLWMASGFPKKSMERLQNNNYCLKINLKRISLFDFYKITEKYGGYKFINDLKINESVKKPWLEMLKEFNIQSKHKKFKTQIVKQYNKYLLHFATKNLSNDAEVMSTDDENCQQNLANENADKEDIDRISSLKHVQKLMEKLEKSMKETEKLFHENQELQIQVNKYKMENEIVINLRNESSAFQKETNDLKKRCRDLTIACEVNDFKINLLTTLNESKEAEIKTLKENDYEEKLKNYEKKLRNVDEEFEKLREMLNAENKNRLFMTKVIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -