Csub021335.1
Basic Information
- Insect
- Catotricha subobsoleta
- Gene Symbol
- Arid2_1
- Assembly
- GCA_011634745.1
- Location
- JAABKK010002439.1:4686-13040[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-24 5.6e-21 75.4 0.0 2 89 54 139 53 139 0.95 2 2 5.4 1.4e+04 -2.8 0.2 15 46 1356 1386 1314 1412 0.62
Sequence Information
- Coding Sequence
- atgtccTCATTAGACACAAGTCAAGGAAATACATCGACTGGTTCAATAAATGAAGATTCAATTAGTAGTGTGACTAAAACCGGTTCGACTAAAAAGCATTTCCATCTGCAGCAACAACAATTTCAACAAGCTACCCATCGCTTAGAAGATGATCGAGACAAAACTAGCTTTTATAAGGacttatatcattttcatgaaattaaagGaacCCCAATACCGCGTCCCCCTCGTATAAATGGACATGAAATTGATCTGCATAAGTTTTACTCAATTGTATGCAGTCGTGGTGGATGGGCGAAAATTAATTATCGCAATGAATGGGAAGAACTTGTTCCGGAATTCGATTTGCCAAAAAAGTGCGTGAACGCAGCGGTTGCacttaaacaaatttatatgcgTTATCTTGATCGTTATGAGAAATTACATTTCCTTGGTGAAGACAATGATCGATTAATAGATGAGGTGGATGACGATAATCGAcataaaaaatggaataacaaaaatttaaatgaagttccattaaaatataattacaaccAACACAATGTTCCAGATGGTTTACGTGTAATTCACAAATTATCTACAGATCTATATAAATCATCGGAATATGATCGCCTTTTAATGTCGTTGATGTCACCATTACCAAATGAACAAGACTTTGCTATTAATGTTTGTACATTAATGGCAAATGAGAGCAAACATACTCTGAAAATTGAACATTGTCCAAAATTGATGGATGCATTACTTGGTCATGCCGGTATTTTCTCGCATATTTCATTGCGCgaattatttgttgaattcTACTCAAAAATACGTCAACATTCTTTACAATCATTTTGGGGTGACTGCCTTAAAGAAAAACCAGAAATTCTCGAGTTATCTTatgatgattattttcaatcttctgatgaaaaattattggatAATGTGCCAGGACGTCCACCAATTCGATTGCGTTCTAGCGATAAAGAAACATTTGAAGATGGTTTAAATGCACTATCCACTGAATTAGATGATTTCACGTCATTagactttttaaatttacgcCGTGGCTTAGGTACACATGATTACATCGGTCAGCGTGTCCATCAAGTTACTTCTATTTTTCGAAATCTATCATTTATCGATGAAAATCTTCAGACATTGGTGAAAAATCGTACCTTTATACGTTTTTTGGTAATGTGTTCAAATATTCGATGGGGTAATTTACATCAAATGGGTTTGGATATGTTAGGCAATATAGCTACTGAGTTAGAACTTTGGGATCCGACAGCAGATGATTTAACACGATGCCTTCTTTCAACTATTTCGGATGGATTGGAAAGTCAAGATCGTGGTGTGATTATAAGCTgcttagaaattttatataagttatGTCAAAAAGGAGCAAATGAAGATTATTTGCATAAATGTTTGGATAAGAAAACCTACCGACAAATATGCTTATTTTTGTCACTCAATGATATTATGTTGCTGCTATATACTTTGGAATGTCTTTTCGCATTAACTTCATTAGGTGAAAAAGCTTGCTTTTCAATTGTTCAAATTAGTGGAGTCGTTGATACTTTAGTGTCTCTTGTCACCGTCGAGGCTCAAAGCTATGGTCCTGATGGATGTATTCTGATGAGAGTGGTTGAAACTGTACCAACACATCTTAGTAATCCTCAAACAATATCTTCTCATAACCATCACCTtcatcaacaacatcaacaacatggtattaataatttaacatcttTACCAACGTCCTCACCAATACAGCAAAATAATCCGCTTGATGTCACAACAACTACAACTTTGACAACATTTTCTCCACCCGAACCACAAAAGACAATAGCAATACCGGTTCAGCAACCACCTATATCTTCAGCACCTACGTCCATTCCACTACAATTGCCGCAAACAACTGTTATTCGAACAAATATACCAGCACCTGCATTTTCACCAGTTCCAACAATAAGCACACCTACATCAGTCATAGCTACATCCTCATCGTCAACCCCATCTAATATAGTAAAACAAGAGTTACCATCATCAAATTCCCCAACGacacaacaaaatacaattacttataAACATGCGCAGCAGCAAGTTGgacaaGAAAACGAACAATTCGCTTTAGCATGGTTACGTGCAACCTTTGAACCTGTTATGGCACTAACTTCTCGTATCGAACAGCAAGATctctataaaatgtatttaacgGCTAGTTCAAAGGTTGGTCGAACAGGCGTCGTTACGCAATTACATTTTCCTCGTTGTGTTCGATCAGTATTTGGAGGCACTGTTGGGCCAAATCAAGTTaaagtgaaacaaaataatatcgaaactacatcattttattatgaagGAATTAGAATTAGAGCAAAGCCATTGGCAGTAGTCCATAAAGGAACTATTTTGCAAGCTGCTGTTACAACAACCTCCGTACAAACTAccgaaaatatagttaaaaaagAATGCCCCTCTCTAGTGAAAACTTCAAACACCATTCAATCCcatcaacaacaaccacaacaGCAAGTGCTACAAAATCAATTACAGCAACCCAATAATTCAATTCTAGTTGCACAATTATGTGGAAAAAATGTAGttctaaatcaaaatattCAATCTCAACAGCAACAAACACTTTCAACCACTCCAATTCTACAGCAAGTCTTAAGTAATCAAACTGGTGAAAATCTTTTAGTGATGGCACATCCACCACAAAATCGACCCAATATTATTCAACACCATCAAATGAACTCAACTAGCTCATCATCTACTATCGCTTCTGTTACATCATCTTCATCATTGATTAAAAGTCTTTTGGCAAATAAGGTAACCACATTAGATGGTGCTACGACAACAGCTACTACAAATGTTGCATCTAGTATTATTGCTACTACAAATGTGAATGTGCATCAGgtTGCTCAACGCCAGCacttacaaaaacaaaaagaagccCAACAGTTAGCTGCAgctaatttaaacaattcaaCCTCTTTTGTAAGTGAGATTAATACAAAATCTGTAGTGCAACAAACACAACCGATAACAATTAAAGCTACTACCATACATTCAAGTTTACCACCAAATATAAAGGCGTCAATTACAACAAGCACATTAATACCAGcaacaataattgaaaaaaaaactgaccaACTACATGATTCTTctttaaatacaaacaaaccGAATTGGGACCCAGTACCACCTCTTGCACCATTAAGTGGCGGTATGCACAGTAATATTCGTCAAACTAGTATTATTGCATCTATTCCAGCACCTACCATAAGTCCACCAAAAATCGATGAAGATTCAAATTCAACAAATCAATCAGCTGGCTCAAGTGCTTATAGCACCAATCCAGCAACACCAATTTGTGCTGATGATACTGAAAATTCATTTGCTGGATTTGAAGGTCTATTGATTCCCGGTAATAAGATTTACGGTGATGATGATTCAAAAGATGCAATAAATAAGCTATCACATGTCGTTACGTCTAATAAAATGTTAGCTGATTTATTAGAACGAAAGTCATCTGAGCCgccttttaatatttcaagtgATTGTGGAAACAAGAGAAAGCTAGATTCAGGACTGACAGAAACTAATAGTGAAACGGAACCTTCTCTAAAACGacttttaaaagaagaaataaattcaattgaagaTGTTGAGAATACACAGAAAGGCTCATCATCAACTGCCgcaaatttatatgcaaaattagCAGCATCATTGTTAGAAGATGAGGACATGGATATTGAAGAAACAGAACCTATTATAGAGCCACCGAAACCAGTAATAACAGTTCCAATGCAACGGCAGATCATTGTATCACCAAATAATCCACCTCAGATGATTTTGGCGCCTACACCAACAAATACACCAATAGGACAAGCAACTGCAACAATAAAAACGGAGTCTGGTTATCAAACAGTGCCTGTAATTCTACAGCATGGTACCTCAAACCAAATGACgaacattcaaattcaaaaacaaattaatagtaTGGGCCAACAAATTATGCAACCAGTTATGCAACAACAGCAAACACAATATATGTTAGCTACAAATCAACAAGGTCAAACCTATTTGGTAGCCCAACAGCAACCTCAACAAATGAATCAAATTTTACTTACACAAACTACACAACAACAAGGTGGCGCAcctacaaaaacaataattattttgcagCAGCAAACACCAAGTGGAGCACAAACAATGCAGCAAAACCCGGGTCACCAAATTTTAGGTACAGTTAATACACCAGGTAATCCACAAAAAGTCATTATGACTACACAACAAGGGCAGCAAATGATTGTTACTCAAGTACCACGTCCTCTTTCTCATCACGTTATAATGAATCAGCATTCCTTGTCAACAGCTGCTAATGTCATTCAATCCAATCCAACAATATCTACAACATCTGCAATTATAAATCAAGTTGCAACTGGTACATTGCCAGTAATAAATGCACAGCCACAGATTGTATCTCAAGTTCAACTGCAGCAATCACAAACTCAGTTGTCACTACCACCACCTTCGCCTTTGCAAATAAATCAACAGCAGGTACAAAAGCAACagatacaacaacaacaaatgcaGCAACAGCAACTTCAACAACAGCAACTTCAACAACAGCAaattcaacaacaacagaTTCAGCAACAGCAGATTCAGCAACAACAGCTTCAACAACAACAGATTCAACAATTACAACACCAGCCTATTCAACAACAGGTAATTCAACAACAAGTAATTCAACAACAAGTAATTCAACAACAATCGAATCAGCAGCAAACGATTCAACAACAAGTAATTCAACAACAATCAGTTCAGCACCAGCAAGAACAGCAACCACTTCATGTACCACAAGTTGATAGAAAAACTAATTCGCCAGTTGAAAAGAAACAAGTTTTTGTAACAGGTAatggaaatattgaaatgacaGAAGtaacacaacaacaaaatcggCCACAGTCTCAACTACAACCATCTGCACCAAGTGTAATAACACcaaaaattgaagaagaaaCATTGGATCCCAATTGGTTATGGGTCTGTGATTGGCGTGGTTGTCAAAAaaaaaagtttcgctCAGCAAATGAGGTATATTTACATGCATGTGCTGTTCACTGTCCGGACAATATTGATTCAAATGCAGAAATCTATTGTCAGTGGGGAGCCGGACCAAATTTATGCGATAATTTACCGCGTAAGCGTTTTTCATTGATGACTCACTTATTTGATCGTCATTGCACAACGGAATCATTCAAAGCTGGAATAAATCGACGTTTAGCAGCTGGTGTACAAACAAATCAACCCAGTCAACCGgttactattattaaaaatccaaTAGCTGTTGCAAGTCAGCATCAACAACAATCAGAAAATACAGCAGGAACTGCATCACCAGCATTATCAACTTCTTCATCAGGATCATTAAATGCTGGTAGTGCTGCTATGCAGGCAATCAAAAGACATGCATTAGATTTTGTTAATCCAAAGGAAATGATGGATGAAAATGAAGGTCCAGTTACAAAAAGTATTCGCTTAACTGCAGCTCTTATTTTACGTAATTTGGTAAATTATACAAGTACAGCTAAAAGatgttTACGATATTACGAGCCACATTTAGCTGGAGTTGCTTTAAGTAATGTGGAATCCAGTCGAACAATTGCCCAAGTACTTTACGAAATGAATGAATCTTatccatattaa
- Protein Sequence
- MSSLDTSQGNTSTGSINEDSISSVTKTGSTKKHFHLQQQQFQQATHRLEDDRDKTSFYKDLYHFHEIKGTPIPRPPRINGHEIDLHKFYSIVCSRGGWAKINYRNEWEELVPEFDLPKKCVNAAVALKQIYMRYLDRYEKLHFLGEDNDRLIDEVDDDNRHKKWNNKNLNEVPLKYNYNQHNVPDGLRVIHKLSTDLYKSSEYDRLLMSLMSPLPNEQDFAINVCTLMANESKHTLKIEHCPKLMDALLGHAGIFSHISLRELFVEFYSKIRQHSLQSFWGDCLKEKPEILELSYDDYFQSSDEKLLDNVPGRPPIRLRSSDKETFEDGLNALSTELDDFTSLDFLNLRRGLGTHDYIGQRVHQVTSIFRNLSFIDENLQTLVKNRTFIRFLVMCSNIRWGNLHQMGLDMLGNIATELELWDPTADDLTRCLLSTISDGLESQDRGVIISCLEILYKLCQKGANEDYLHKCLDKKTYRQICLFLSLNDIMLLLYTLECLFALTSLGEKACFSIVQISGVVDTLVSLVTVEAQSYGPDGCILMRVVETVPTHLSNPQTISSHNHHLHQQHQQHGINNLTSLPTSSPIQQNNPLDVTTTTTLTTFSPPEPQKTIAIPVQQPPISSAPTSIPLQLPQTTVIRTNIPAPAFSPVPTISTPTSVIATSSSSTPSNIVKQELPSSNSPTTQQNTITYKHAQQQVGQENEQFALAWLRATFEPVMALTSRIEQQDLYKMYLTASSKVGRTGVVTQLHFPRCVRSVFGGTVGPNQVKVKQNNIETTSFYYEGIRIRAKPLAVVHKGTILQAAVTTTSVQTTENIVKKECPSLVKTSNTIQSHQQQPQQQVLQNQLQQPNNSILVAQLCGKNVVLNQNIQSQQQQTLSTTPILQQVLSNQTGENLLVMAHPPQNRPNIIQHHQMNSTSSSSTIASVTSSSSLIKSLLANKVTTLDGATTTATTNVASSIIATTNVNVHQVAQRQHLQKQKEAQQLAAANLNNSTSFVSEINTKSVVQQTQPITIKATTIHSSLPPNIKASITTSTLIPATIIEKKTDQLHDSSLNTNKPNWDPVPPLAPLSGGMHSNIRQTSIIASIPAPTISPPKIDEDSNSTNQSAGSSAYSTNPATPICADDTENSFAGFEGLLIPGNKIYGDDDSKDAINKLSHVVTSNKMLADLLERKSSEPPFNISSDCGNKRKLDSGLTETNSETEPSLKRLLKEEINSIEDVENTQKGSSSTAANLYAKLAASLLEDEDMDIEETEPIIEPPKPVITVPMQRQIIVSPNNPPQMILAPTPTNTPIGQATATIKTESGYQTVPVILQHGTSNQMTNIQIQKQINSMGQQIMQPVMQQQQTQYMLATNQQGQTYLVAQQQPQQMNQILLTQTTQQQGGAPTKTIIILQQQTPSGAQTMQQNPGHQILGTVNTPGNPQKVIMTTQQGQQMIVTQVPRPLSHHVIMNQHSLSTAANVIQSNPTISTTSAIINQVATGTLPVINAQPQIVSQVQLQQSQTQLSLPPPSPLQINQQQVQKQQIQQQQMQQQQLQQQQLQQQQIQQQQIQQQQIQQQQLQQQQIQQLQHQPIQQQVIQQQVIQQQVIQQQSNQQQTIQQQVIQQQSVQHQQEQQPLHVPQVDRKTNSPVEKKQVFVTGNGNIEMTEVTQQQNRPQSQLQPSAPSVITPKIEEETLDPNWLWVCDWRGCQKKKFRSANEVYLHACAVHCPDNIDSNAEIYCQWGAGPNLCDNLPRKRFSLMTHLFDRHCTTESFKAGINRRLAAGVQTNQPSQPVTIIKNPIAVASQHQQQSENTAGTASPALSTSSSGSLNAGSAAMQAIKRHALDFVNPKEMMDENEGPVTKSIRLTAALILRNLVNYTSTAKRCLRYYEPHLAGVALSNVESSRTIAQVLYEMNESYPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -