Csub013723.1
Basic Information
- Insect
- Catotricha subobsoleta
- Gene Symbol
- osa_1
- Assembly
- GCA_011634745.1
- Location
- JAABKK010000077.1:2506869-2523871[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3 1.6e+04 -3.0 0.0 22 46 213 237 205 239 0.82 2 2 1.1e-24 2.9e-21 76.3 0.0 3 89 443 529 441 529 0.91
Sequence Information
- Coding Sequence
- atgtttaacgTATTGTACAAGCAATGTCGAGTAAAATGTCGGGCCCAAAAATATATCAGCTTCCCGTACACCAGTCAATGTGAGGTTAGGCAAGTAGAGAATACGAGAGTTGTGCTGgaTTCAATTGGACAAAATAGCAATGACAGTTCTAGTGGTGTTGGAACCGGTGTGGGCACAACTCCAGGTACTCCTAATTCGTTGGCGATGAGACCAACTCCATCACCAACAGGATCTTCGGGTTCACGATCTATGTCGCCGGCTGTTGgtCAGCAGAGTCTACCAACACGTCCATCAAGTGATCATTCACAAAATCTAAATCAAGTagtaaatacaaattcaagTCATCCATCAATTGATGGTGCTGTGACACCACCATCTCGTCCTCCAATGGCACCCACAACCCCATCACCAAGCGGAATAATGGCAGCACAAGGAAACTATTCAGCTCGGCCTCAATATCCAACAAATTATGGACCTACACCTACTGGTCAAAGCATGCCTCTTGGGCCAGGACAATATCCAGGACGACCTATGCCAAATCAAGTATCACCTCATTCTCAATTTCCTCCGTACCAACAGAGTTGGGGTCCTACAGCACCTCAACCTGGTATGAATCATATTCAAGGTAAAAATGCTCCACCACCCACTACTGGTGGTTCACCGAGACCTTTGAATCATTTGAAACAACATCTTCTGCATAAAGGAGGCTATGGCGGCGCTCAAAGTCCAACACCACAAGGTGGCTATGTAAATGGACCTGGTATGCATCCACCAATGGGTCCTCCTCAAATGCAAGTACCAATGGGTCCGCATATTGGCCCACCTCGTATGCAgggACCCACAAATATGGGACCACCATCTGCATTACATAATCCACAAGCAGCTCCTCCATCAATTAATAATCATCCGGATGGCCCTATGCAACCAGATGGTCCACAAGATAATGGTGTTAGTTCAACGGGATCGTCTGGTTCATCACAACATCCAGTTACATCGATCATTACAACGGGTCCAGATGGTGCACCATTAGATGATGCTAGTCAACAAAGTACTCTGTCAAATGCTTCAGCAGCTTCTGGCGAAGATCCTCAATGCTCAACTCCAAAATCTAGGAAAAATGATACATACAATCAAAGTCATCTGACACCACCAAGTGCTACACCAACGCCACATGATGATTTTGATATGGGTTCTCCAACTTGGCCAAGAACACCTGCTAGTCCggtaTTTAATAGCCATGGTCCTGCAGAGCCAACGGTACATAGATCATCTAAGAAATCAGACAGCTTATGTAAACTTTATGATATGGACGAAAATCCTGATAGACGTGGTTGGCTGGACAAATTGCTTAGTTTTATGGAAGAAAGGCGAACACCAATTACAGCATGTCCAACAATATCAAAACAGCCATTGGATTTGTATAGGTTATATGTGTTGGTTAAAGATCGAGGAGGATTCGTCGAGGTATGCAAGGTTACCAAAAGTAAAACATGGAAAGACATAGCTGGACTATTAGGAATTGGTGCAAGTAGCAGTGCAGCATATACATTACGTAAACACTacacaaaaaatttacttgCATTTGAATGTCATTTTGATCGAGGTGGCGTCGATCCAATACCAATTATACAACAAGTAGAAGCAGGctcaaaaaagaaatcagCTAAGGCGGCATCCGTTCCGTCACccgGTTCATCCAATTCACAAGACTCATTTCCACCACCTGGTTCAAGTTCCACATCAATGGATGGTTATGGTGGATATACAAGTGGTTATCCACCAGGTAGTGGTCCAGGTTATAATGAGCCAATGCAACGTTCACCGTCACAAAGCAATTCACAATCGCCACATTCtggTAATGTAACCCCAGCTGGTGAAAATATAAGTGTGAATAATCCGTTTGATGATCCTCAACCACGTTCGCCATTTCAGCAAAGCGCTCCCTTTTCCCCTGTTTCACGACCTCAAGgCGCTCAATATCAGGGTCAACAAACGTATAATCAATATGGTCCACCTGAACAATATGGTCCTCCGCAGCAACaatatcaacaaaatcaaGGCCCATTTCCACCGCCAAATAGAACAATGTATCCTCCTTATACAGACGGTGGTGAACCaagTATTCCATCACCTGTTGGTGCTGCTAATAGCGGTGATCCATACAGAGGTTATGGCAGCGGACCACCGGGTCCTTATCCTCCTCCACCTCAACCTCCGCCACCACCAAGACCATATAGTCAACAACAGCCACCTGCTGgtgcatcatcatcatcagttGCTGTTCCACAAGGACCTGCCTCTGTAACTGCACCTGGTCCTTATCCACCACCGCCACAACAATTTGATTATCGCCAACAAGATCAGACACCACAACCACGAAGGCATCCTGATTTTGCTAAAGAGCCTCAATATTCAGGCGCACCATATGGACAACGACCACAAGTTTATCcaAATTGGCCAAATAACTCAGCGCCAGGACATTATAATAGAGGGCAATATCCACAACAAGGTACTCCTCAGCAATGGAGTGGCCAAAGACCACCAGGTCCTCCTGTATTGGGTCCACCTGGTCAATCACCACAATGGGGTGAACAGCATAGATATCCACCACAAAGTCAACAGCCGCCCTATCAAGGAAATCAACAAGGTCCACCAGCACAATGGAGTAGCATGGGTCCAGCACCTGGCATTGGTAGTCCAAGTGCAACAAGACCTCAACATCGTGGTGGTAGCGTTGGAAGTAGTGGTAAACCATTTAATATGCCACTACCGCCCCAAGGAGCAAAACCAACGGTCGCTCCATTTACTGGATCTGGAGCACCAGTTAAACGTGACATTGTATTTCCACCAGATAGTGTTGAAGCAGTTACGCCTTTATTATATCGAAGAAAACGACTTTGTAAGACAGATTTAGGCACAACTGATCCGTGGagaatatttatgtgtttacAATCGGGTCTATTGTCGGAAAGCACATGGGCTTTAGATGTATTAAACATATTACTTTTTGATGATTCAGCTGTTCAGTACTTTGGTTTAGCACATCTTCCCGGTTTACTAACATTATTGCTAGACCATTTTCAAAAGAGTTTAGCTGATATGTTTGATAGCGAAGGTGATGATCGTCATGGCTATGGCTGGCGTTCGTGTTCATTGGCATCATCAGAACTTCCAACAAAAAGAACGACCAAAACTATACAAAGATCCGTTTCTGATGAATTTGATGATATCTTAGCGGCGGAATCAGATGATCAAGAACAACCTGTTGATTTAGGACAAGTTACCGAAGTACCAAATTCAGCAGATCGTTTGCTGGTATTAGCAGCTACAACCAATTATACTTTAAGTTCCAGAAAAGGTTTGCCAGTTAGAATAAAAGAGGCCGAAgatgatatttttgtgttagATTCAAAACGTAGTTGGGATATTGATTCGGatcaaatttatcaattaaaatcgAGTGTTGGAGGTGATCCATGGACGTATGGACATACACAACCACATCCACATGATCATATTATAGACTCATTCAAAGGTGAATTTGTAAACATTCCATTTGCTAGGTATATTAAAAGTAGTGATAGAAAACGAAATGCGTCGTCTATGTCGACAACAAAAGTCGTCGATTGTAAAAACGACGTAGGTGATAAATCCAATGTGTATAAACCAATAATTAgattaaaagaagaagaaccagaaaatgaattaagaGAAGATGAATTAGCAGAAAATGaagagaaatataaaagaaaacaggCAGTTGAAGCGATGGATGTTAATGATTTTGATGACAAAAAAGTGTCAACAAAAAAAGAGTCATCGTTAAATGTGGACAGTGATTGCAGAGAGGTAGATATGGAATTAGAACGGATACCAAATGGCCCACAAAGTGGTGGTGATGTTGCAAACGACAATGATGATGACGAACATAAAACAAACTTAAAGCGATCAGCTGATGTTGTATTGTTTGATTTTAGATCAACAGTTCACGATCCAGCGGAAACATTGAAAAGACGACGAGTTAGCGATTATGAGGATGAATGTTATGCACGTGATGAAGCAACATTGTAtttgataaatgaaaatcagGATACATTAGCTCGACGGTGCATatgcatttcaaatatattaaggAATTTAACCTTTGTTCCTGGCAACGAATCCGTATTTGCCAATTCAGAAACATTCCTTTCTATTTTAGGCAAAATATTGCTGTTACATCATGATCATCCAGTTCGTACACAAACAATACGAAATTATGACCGTGAAGATGATACTGACTTTGCAGATTCTTGTAGTAGTCTGCAAGGTGAAACTGAATGGTGGTGGGATTATTTAATCCAATTAAGAGAAAATATGATGGTTGCTATTGCCAATATTGCCGGTCATATGCAGTTATCCAAATATGAGGAATTAATAACTCGACCTTGTTTAGATGGTCTATTACACTGGGCGGTGTGCCCATCAGCACATGGCCAAGATCCATTTCCATCTTGTGCACCGCATTCATCACTATCACCACAACGCTTGGCATTGGAAgcattatgtaaaatatgtgTTACTGACGCTAATGTAGATTTAGTAATAGCCACACCTCCATTTTCACGCTTAGAAAAACTTTGCTCAGTACTTACACGTCATTTATGTAGAAACGAAGATCAAGTTTTACGAGAATTTTCGGTTAAccttttacattatttagcGGCTGCTGATAGCGCAATGGCTCGAACTGTAGCTATGCAAAGTCCGTGCATATCCTATTTGGTAGCATTTATTGAACAAGCCGAACAAACGGCACTTGGTGTAGCCAATCAACACGGTATTAATTTCCTACGAGAAAATCCCGATTCAATGGGTACCAGTTTGGATATGTTACGTCGTACCGCTGggacattattatatttagcgCGGCATCCAGACAATCGACCATTATTCCTACAACAAGAACAACGACTATTAGGACTTGTAATGAGTCATATATTAGATCAACAAGTTGCATTGATTATTTCACGAGTATTATTTCAAGTGTCAAGGGGCACTGGTCCAATTACAATAGGTGGTCattctgaatataaaaaacattatcagataataaaaaaaaccacttaTTCATCAGCTACAGCACAAATACAACAGCCACAGTCACAATCAATATCATCAGCGTTGCATCAAACAACTTATCCatcaccaacaacaacaacaacaataacaacaccTACTACTACCACAACAATATTATCAGATCAACAgcatataataacaaaagaatCAACATCAATTCAAGCTACGTAA
- Protein Sequence
- MFNVLYKQCRVKCRAQKYISFPYTSQCEVRQVENTRVVLDSIGQNSNDSSSGVGTGVGTTPGTPNSLAMRPTPSPTGSSGSRSMSPAVGQQSLPTRPSSDHSQNLNQVVNTNSSHPSIDGAVTPPSRPPMAPTTPSPSGIMAAQGNYSARPQYPTNYGPTPTGQSMPLGPGQYPGRPMPNQVSPHSQFPPYQQSWGPTAPQPGMNHIQGKNAPPPTTGGSPRPLNHLKQHLLHKGGYGGAQSPTPQGGYVNGPGMHPPMGPPQMQVPMGPHIGPPRMQGPTNMGPPSALHNPQAAPPSINNHPDGPMQPDGPQDNGVSSTGSSGSSQHPVTSIITTGPDGAPLDDASQQSTLSNASAASGEDPQCSTPKSRKNDTYNQSHLTPPSATPTPHDDFDMGSPTWPRTPASPVFNSHGPAEPTVHRSSKKSDSLCKLYDMDENPDRRGWLDKLLSFMEERRTPITACPTISKQPLDLYRLYVLVKDRGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGGVDPIPIIQQVEAGSKKKSAKAASVPSPGSSNSQDSFPPPGSSSTSMDGYGGYTSGYPPGSGPGYNEPMQRSPSQSNSQSPHSGNVTPAGENISVNNPFDDPQPRSPFQQSAPFSPVSRPQGAQYQGQQTYNQYGPPEQYGPPQQQYQQNQGPFPPPNRTMYPPYTDGGEPSIPSPVGAANSGDPYRGYGSGPPGPYPPPPQPPPPPRPYSQQQPPAGASSSSVAVPQGPASVTAPGPYPPPPQQFDYRQQDQTPQPRRHPDFAKEPQYSGAPYGQRPQVYPNWPNNSAPGHYNRGQYPQQGTPQQWSGQRPPGPPVLGPPGQSPQWGEQHRYPPQSQQPPYQGNQQGPPAQWSSMGPAPGIGSPSATRPQHRGGSVGSSGKPFNMPLPPQGAKPTVAPFTGSGAPVKRDIVFPPDSVEAVTPLLYRRKRLCKTDLGTTDPWRIFMCLQSGLLSESTWALDVLNILLFDDSAVQYFGLAHLPGLLTLLLDHFQKSLADMFDSEGDDRHGYGWRSCSLASSELPTKRTTKTIQRSVSDEFDDILAAESDDQEQPVDLGQVTEVPNSADRLLVLAATTNYTLSSRKGLPVRIKEAEDDIFVLDSKRSWDIDSDQIYQLKSSVGGDPWTYGHTQPHPHDHIIDSFKGEFVNIPFARYIKSSDRKRNASSMSTTKVVDCKNDVGDKSNVYKPIIRLKEEEPENELREDELAENEEKYKRKQAVEAMDVNDFDDKKVSTKKESSLNVDSDCREVDMELERIPNGPQSGGDVANDNDDDEHKTNLKRSADVVLFDFRSTVHDPAETLKRRRVSDYEDECYARDEATLYLINENQDTLARRCICISNILRNLTFVPGNESVFANSETFLSILGKILLLHHDHPVRTQTIRNYDREDDTDFADSCSSLQGETEWWWDYLIQLRENMMVAIANIAGHMQLSKYEELITRPCLDGLLHWAVCPSAHGQDPFPSCAPHSSLSPQRLALEALCKICVTDANVDLVIATPPFSRLEKLCSVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVAMQSPCISYLVAFIEQAEQTALGVANQHGINFLRENPDSMGTSLDMLRRTAGTLLYLARHPDNRPLFLQQEQRLLGLVMSHILDQQVALIISRVLFQVSRGTGPITIGGHSEYKKHYQIIKKTTYSSATAQIQQPQSQSISSALHQTTYPSPTTTTTITTPTTTTTILSDQQHIITKESTSIQAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -