Cpin008931.1
Basic Information
- Insect
- Catoptria pinella
- Gene Symbol
- stc
- Assembly
- GCA_963556745.1
- Location
- OY750767.1:11145624-11157169[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.9 2.4e+04 -4.0 1.6 15 19 475 479 474 479 0.81 2 14 0.043 5.4e+02 1.2 1.5 2 10 507 515 507 515 0.92 3 14 3e-05 0.38 11.3 18.1 4 19 523 538 521 538 0.93 4 14 1.7e-07 0.0021 18.5 12.6 1 18 574 591 574 592 0.98 5 14 0.0011 15 6.2 17.9 1 19 633 651 633 651 0.98 6 14 4.2e-06 0.053 14.0 11.8 1 19 692 714 692 714 0.88 7 14 2 2.6e+04 -5.0 2.2 6 10 744 748 744 748 0.94 8 14 0.0027 34 5.1 7.4 1 11 754 764 754 765 0.95 9 14 0.035 4.4e+02 1.5 0.3 4 10 769 775 768 776 0.93 10 14 4.9e-06 0.062 13.8 15.0 3 19 783 799 781 799 0.92 11 14 0.0011 14 6.3 10.0 10 18 846 854 843 855 0.92 12 14 1.1 1.4e+04 -3.3 1.3 8 13 860 865 859 866 0.79 13 14 3.8e-08 0.00049 20.6 14.1 1 17 891 909 891 915 0.85 14 14 0.00046 5.9 7.5 12.5 1 19 921 944 921 944 0.86
Sequence Information
- Coding Sequence
- ATGTCCCAGTGGAACAATTCATATGTTTACGAAAACCAGTATCAGACTACCGATTCTTGGAATGGAGATCTAAACAGCCAATTTGCCAACCAAGCATATTATCCTAACCAACAATATGGAGCTAATAACCAACATCAACAATACGAGCCAACAAGTCAACAATATGTCAGTTTCAATGAGTTCTTGTCACAGATGCAAAATAACGGAACCCCTGCTCCTGCCAATTCTAGCAACTACAACAGTGCACAATTTCAGAATTATAGTCAATATGATTATCAAAATATGCCAACTACCTCTCAAAATGCTCAGgtagataattattatgcaaCAAATCCTTCCAGTTCATCAAATAGTGTTCAGTCATGTCCTCAAAATCAGTTTACTAACAAAGTTGCAGATTCAGGTGACCCAAATGTTTTTACAAATGATTTAATTCTTAAATCAAACTTGACACCTACAGCCAGTGAGTTTGTGCCAAAAAGCTCTGGTGTGAAGCCATCTACTAGCAGTCAAAATGTTCCAGATCCTTCCTACTCTAATAATGGAGCTACTAGTAATGTTACAGAGCATAAACTGCAGAAAAGTCGAGGAAGTTCATCAGACACAAATTGGAGAGAAAGACCTCAAACATCTCAACAAAATAGtgaaactaaatataaaaatgaaaataataagaacTCTCATGAGAATAATAGTCGCTCTTATGAAAATAATGGTCGCCCTCATGATAGTAATAGTCGCTCTCATGATAGTAATAGTCGCacttttgaaaataatagtCGCACTCATGATAATAATAGTCGATCTCATGATAATAGTCGCTCTCATGATAATAATAGTCGCTTTCATGATAACTATAGAAACATTGATTCTAATAATAGAACTAGAGACACTAAAAATCGTTATCAAGATTCTAACTACGAGTCTAATAgtcggaataaccggaatcagCCAAAGTCAAAAGCTAAGAATAAAGATGGAGATGCGCGGACATTTTATAATAGTACAGTAGACAAAAACAGCCAGGAATACAGGAACAACAGAGGAGAGAACTCAACCAGAAACAGGAACTGGGTTGGAAGTCAGAGATTACGTGCAGCAGAACGAGATGTTACTGAAGATGAACAATATGCAAGCAGTTATTTGAATCATAAAGATGAAAAAGGAGAAAGAGTTGCAAAACAAGATAAACTATCCAGTCCAAAAGTTAGGGGAAAACCAGTTGAAAATGTGCCCATAGAAATGACTCAACGTGAAAGACTGAGTGAACAATTAGATAAGGGAACCTTAGAGTGCCTGGTATGCTGTGAGCGTGTGAAACAGATAGACCCCGTGTGGTCCTGCAGCAACTGCTACCATGTGTTGCACCTACGCTGCATCAGAAAATGGGCTATGAGCAGTGTTGTGGAGGGCAAATGGCGTTGCCCCGCCTGTCAGAACACCAGCGAAGAGATACCGTCAGATTACCGCTGCATGTGCGGTTACGTGCGTTCCCCGGAGTACCAGCGCGGAGGCAGCGGCGCGCACACCTGCGGCCGCTCGTGCCGGCGCCCGCGCTCGTGCCCCCACCCCTGCACGCTGCTGTGCCACCCTGGACCCTGCCCGCCATGCCAGGCTACTGTCACCAAGCAATGCGGGTGCGGCGCGGAGAACCGCTCAGTTCTGTGCAGCAGCAAGCTGCCGCAAGTGTGCGGTCGCGTGTGCAACCGGCTGCTTGACTGCGGCGTGCACACCTGCCAGAAGGAATGTCACGAGGGTACCTGTGAAGACTGCGCCGAGACTGTCACACAAGTATGCTACTGCCCAGCGGCGCAGAGCAGATCAGTGCCGTGCACGCGCGAGACGGGCGGCGAGCAGCATTGGTCGTGCGGCGAGGCGTGCGGGCGCGTGCTGGCGTGCGGCCACCACGTGTGCCGCGCCGGCTGCCACGCGCCGCCCTGCCCGCCCTGCCGCCTGCTGCCGCGCCTGGTGCGCGCCTGCCCCTGCGGCAAGACGCAGTTGGCGGAAGGTTCTCGCAAGTCTTGCACAGACCCGATACCGCTGTGCGGCAGTATTTGCGCGAAGGCGCTGCCGTGCGGGCCCGCCGGCGATAGGCACTTCTGCAAGCAAGACTGCCATGAAGGCGAGTGCCCGGTGTGCCCCGACAAGACCCTGCTGCAGTGCCGCTGCGGGCACTCGAGCCGCGAGGTGCCGTGCGCCGACCTGCCGCAGATGTACAACAACGTGTTCTGCCAGAAGAAATGCAACAAGAAACTGTCATGCGGCCGGCACCGTTGCCGCACCGTGTGCTGCGCGGCAACGTCGCACCGTTGCGCGGTCGTATGCGGCCGCACGCTCTCCTGCCAGACGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCGCGCCCTGCCCGCGACTAGGTTTCGAAGAGATTCGTTGCGCGTGCGGTGAACAAGCGCTGCTCCCGCCCGTGGCGTGCGGGGCGCGCCCCCCCGCGTGCTCCGCCCCctgccgccgcccccgcccctgCGCCCACCCGCCCCACCACTCCTGCCACCAAGGCGACTGCCCCCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGCGGACACGAGGAACGCAAGACGATACCGTGTTCCCAGGATGAGTTCTCGTGCGGGCTTCCGTGCGGCAAGCCGCTGCCCTGCGGCAAGCATACTTGCATCAAGACCTGTCATAAAGGACCCTGCGATACTGGAAAGTGCACTCAGCCGTGCATGGAGAAGCGTCCATCGTGCGGACACCCGTGCTCGGCGGTGTGCCACTCCAGCGCGGGCGGGCCCTGCCCCTCCGCCACGCCGTGCCGCCGCCTCGTGCGCGCCACCTGCCTCTGCGGCCGGCGCGCCACGGACCGCCCCTGCTGCGACAACGCGCGCGACCTCGCCAAAATAATGAGCGCGCTGGTAGCGACTAAAATGCAAGAAAGTGGATCCGTCGACTTGTCGGAAGTGCAGCGTCCGGCCAACATGCTCAAAAcgtaa
- Protein Sequence
- MSQWNNSYVYENQYQTTDSWNGDLNSQFANQAYYPNQQYGANNQHQQYEPTSQQYVSFNEFLSQMQNNGTPAPANSSNYNSAQFQNYSQYDYQNMPTTSQNAQVDNYYATNPSSSSNSVQSCPQNQFTNKVADSGDPNVFTNDLILKSNLTPTASEFVPKSSGVKPSTSSQNVPDPSYSNNGATSNVTEHKLQKSRGSSSDTNWRERPQTSQQNSETKYKNENNKNSHENNSRSYENNGRPHDSNSRSHDSNSRTFENNSRTHDNNSRSHDNSRSHDNNSRFHDNYRNIDSNNRTRDTKNRYQDSNYESNSRNNRNQPKSKAKNKDGDARTFYNSTVDKNSQEYRNNRGENSTRNRNWVGSQRLRAAERDVTEDEQYASSYLNHKDEKGERVAKQDKLSSPKVRGKPVENVPIEMTQRERLSEQLDKGTLECLVCCERVKQIDPVWSCSNCYHVLHLRCIRKWAMSSVVEGKWRCPACQNTSEEIPSDYRCMCGYVRSPEYQRGGSGAHTCGRSCRRPRSCPHPCTLLCHPGPCPPCQATVTKQCGCGAENRSVLCSSKLPQVCGRVCNRLLDCGVHTCQKECHEGTCEDCAETVTQVCYCPAAQSRSVPCTRETGGEQHWSCGEACGRVLACGHHVCRAGCHAPPCPPCRLLPRLVRACPCGKTQLAEGSRKSCTDPIPLCGSICAKALPCGPAGDRHFCKQDCHEGECPVCPDKTLLQCRCGHSSREVPCADLPQMYNNVFCQKKCNKKLSCGRHRCRTVCCAATSHRCAVVCGRTLSCQTHRCEEFCHTGHCAPCPRLGFEEIRCACGEQALLPPVACGARPPACSAPCRRPRPCAHPPHHSCHQGDCPPCVVLTTKRCHGGHEERKTIPCSQDEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCMEKRPSCGHPCSAVCHSSAGGPCPSATPCRRLVRATCLCGRRATDRPCCDNARDLAKIMSALVATKMQESGSVDLSEVQRPANMLKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -