Cpin018425.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Catoptria pinella
Gene Symbol
nfxl1
Assembly
GCA_963556745.1
Location
OY750780.1:6899650-6902124[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 2.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.01 1.3e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 18 3.1e-07 0.004 17.6 15.9 3 19 186 202 185 202 0.95
4 18 2.1e-08 0.00027 21.4 13.0 1 19 237 255 237 255 0.93
5 18 0.57 7.3e+03 -2.4 2.0 6 10 280 284 279 284 0.90
6 18 2.1e-07 0.0027 18.2 10.8 1 19 290 308 290 308 0.99
7 18 8.4e-07 0.011 16.3 19.7 3 19 345 361 337 361 0.86
8 18 2 2.6e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 18 2.9e-06 0.038 14.5 18.2 1 18 395 412 395 413 0.97
10 18 9.1e-09 0.00012 22.6 15.9 1 19 422 440 422 440 0.99
11 18 0.0002 2.6 8.6 6.4 9 19 488 498 486 498 0.89
12 18 0.012 1.6e+02 2.9 6.6 4 12 510 518 508 518 0.90
13 18 0.31 4e+03 -1.5 3.5 14 18 547 551 547 552 0.87
14 18 0.22 2.8e+03 -1.1 0.3 7 12 567 572 567 572 0.78
15 18 1.2e-05 0.15 12.6 4.2 1 11 588 598 588 599 0.97
16 18 0.065 8.4e+02 0.6 12.2 4 18 630 645 628 646 0.87
17 18 2 2.6e+04 -6.5 3.4 9 13 652 656 652 656 0.71
18 18 9.4e-07 0.012 16.1 10.1 1 18 687 706 687 707 0.87

Sequence Information

Coding Sequence
ATGGCCCGACGTTACCACGATGCAGCCGCAAAGCTGCAACAGAATGTCCAAAAGCATTTGAAAGAAATGAAGGACCTCTCTTCCTCTGAAGACGAGGACCCCTACGATTCGAGCGTACTCGATGGCATATTCCAGTCCTATAGAAGAGGAGGTGGCGATACCAACATGTTGGATAGGACCCGGCATTTGTTGGAAGAGGCGATAAGCAGCAGATCTGTAACTTGCCTCATCTGCATTGGCTCCATCAAACGAGCTGATGCCATATGGACATGTGACCACTGCTACTGCTACTTTCATTTATCATGCATACAAAAATGGGCTAATGATAGCGTCAGCCTTAGAAGCGAAGAAACTCATGGCTCTATTGCTGTCTTCGTGCCTAGAAAACTCGAATGGTGCTGCCCTAAATGCCGGCAGTCGTACGCGAAGGAGGAAATACCTCGACGTTATCGGTGTTTTTGTGGGAATAATGACGATCCGCCTTACCACCCTTGGCTGATTCCGCACACATGTGGAGAAGTATGTGGTAAAAGACTGTCTGCTGGCGATAATTGTAAACACAAGTGCCTATTGCTCTGCCACCCTGGGCCTTGTCCCCCATGCCCTCAAACTGTGAATGGAGCGTGTTACTGTGAAAAGGAAAGCAAGAAGGTTAGGTGCAGTTCTGCTAAGTGGTCTTGTGGACAgcagtgtaaaaaaatactattgtgTAATTCTCATAGAtgtgaaaatatttgtcatcaAGGTGATTGTCCCCCATGTAGCTATGCAAGTGTCCAACCTTGTCAGTGTGGTGCAGATAAAACAAAACGCCCGTGCAACAATCCTAACTGGCAGTGCCAGAAAGTttgcaataaactatttaattgtGGCTACCATAAATGCTTAAAAGTGTGCCACACTAGTGACTGTGGGACATGTCCAAACTCGGGCATGAGGTCTTGTCCGTGTGGTGCAAATCAGAAGTATGTGGAGTGTCCTGATGTTATTGAAACATGCTTAGGTACTTGTGGTAAAGAGCATGAATATTGTGAACATAAATGCCCGGAGAAATGTCACAAAGGCCCGTGCCCTCCTTGCCAAGTTTTAATTGAAAAGCAATGTCTCTGCTCAGCACATTCAAGGATGTTGCCATGCAGTAAAGAATATAAGTGTGAAACGAAATGTAGAGGAACTAGGCCGTGTGGCAAGCATCCTTGCGCACGTAAATGCTGTAATGGAAATTGCCCTCCATGTGAAAAAATATGTGACAAACCTCTTCAGTGTGGCAGACATAAATGTACGATGGTTTGTCATCATGGACCTTGCTATCCTTGTCCAAGAGAATCTAAGGTGACTTGCAGATGTAAGGAAACTTATGTCACAGTTCCATGTGGTAGAGAGAAACATATAAAACCTCCAAGGTGCAGTTTACCTTGCAAAATGAAATACAAATGTGGTCACTTGGATGAGAATAAGCATTCATGTCATTTTGGCGACTGTCCTCCCTGTAAGGCTATATGCAGCAAGACATATTTGAAATGCGACCACCAATGTAAGGCTGTATGTCATGAATATGTTGCAGTGGTATTTAAACAGGTTGAGAAGCCTGCAACTCCATGGGAAATCACTCCTCCTAAAACGAAAATAATGACTTTAGACTGCCCTCCATGTGAGACCCCTGTCTCTGTCCAATGCTTTGGAGAACATGAGACTGAAAAGCAGCCATGCCATTCTGCTAAAAGACGATGCTGCGGAAGGAAGTGCGGTCGTCCTTTGACTTGTGGCAATCATTCCTGCTCCTTGTTATGCCATTTGTATGCTGCCAATTCTGAATTTCCAAATGTGCCTTATAATTGTAAGCAGTGTGACAGAGAATGTACCGTGGCCCGTCCTGCAAAATGTCTCCATAAGTGCCCAATACGGTCATGCCATTCTGATCCATGTCCACAATGTGACATACTGGAACGCATTCCTTGTCATTGTGGAGTAACAGAGTTGTATTTGCGATGCCGAGAAATATCTACTGCCACTGAGGATATGTTATCCTGCAAGCAGCAATGCCCAAAGAACTTGGAATGTGGTCATCGTTGCAGGAACACATGCCATTCTGGCTCTTGTCAGTTGAGTCAAGTGTGCAATAAAAAGACCAAAGTGCATTGCCCATGTGGCAACTTACGAAAGGAGGCTCCTTGTAATCTTGTAAGAAGTGGAGAAATAGAAATGGAATGCAATGACACTTGTGAAGCGAAGAAGATTGCTGCTAAATTGGAGAAAGAGAAAGAAGAACAGAGATTGAAGGAGTTAGAAGAAGAAAAGAACCGTAAAGAGTTAGCAGAGTATGAATGGAAATTAAGTGGGAAAAAGAAGAAGTATAAGGAAAAGAGAATGGTTCAGAATGTTgacaatagaaatattttacaaaagtatTGGATTCCTATTTTGGGTATAATTATTGCAGTAGTTGGTGCTCTTTATATGATAATAGAAATCTAA
Protein Sequence
MARRYHDAAAKLQQNVQKHLKEMKDLSSSEDEDPYDSSVLDGIFQSYRRGGGDTNMLDRTRHLLEEAISSRSVTCLICIGSIKRADAIWTCDHCYCYFHLSCIQKWANDSVSLRSEETHGSIAVFVPRKLEWCCPKCRQSYAKEEIPRRYRCFCGNNDDPPYHPWLIPHTCGEVCGKRLSAGDNCKHKCLLLCHPGPCPPCPQTVNGACYCEKESKKVRCSSAKWSCGQQCKKILLCNSHRCENICHQGDCPPCSYASVQPCQCGADKTKRPCNNPNWQCQKVCNKLFNCGYHKCLKVCHTSDCGTCPNSGMRSCPCGANQKYVECPDVIETCLGTCGKEHEYCEHKCPEKCHKGPCPPCQVLIEKQCLCSAHSRMLPCSKEYKCETKCRGTRPCGKHPCARKCCNGNCPPCEKICDKPLQCGRHKCTMVCHHGPCYPCPRESKVTCRCKETYVTVPCGREKHIKPPRCSLPCKMKYKCGHLDENKHSCHFGDCPPCKAICSKTYLKCDHQCKAVCHEYVAVVFKQVEKPATPWEITPPKTKIMTLDCPPCETPVSVQCFGEHETEKQPCHSAKRRCCGRKCGRPLTCGNHSCSLLCHLYAANSEFPNVPYNCKQCDRECTVARPAKCLHKCPIRSCHSDPCPQCDILERIPCHCGVTELYLRCREISTATEDMLSCKQQCPKNLECGHRCRNTCHSGSCQLSQVCNKKTKVHCPCGNLRKEAPCNLVRSGEIEMECNDTCEAKKIAAKLEKEKEEQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKRMVQNVDNRNILQKYWIPILGIIIAVVGALYMIIEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00683858;
90% Identity
iTF_00036304;
80% Identity
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