Cpin008847.1
Basic Information
- Insect
- Catoptria pinella
- Gene Symbol
- pnr
- Assembly
- GCA_963556745.1
- Location
- OY750767.1:9589219-9595634[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-17 6.5e-14 51.7 3.7 1 35 384 417 384 418 0.98
Sequence Information
- Coding Sequence
- ATGGGCTCACCGGATTCTACAGAGGAGTTAAAAAATTCAGAGAGCCGACAGGCGGCAGTTGCATTGCTTTCAATAAGACATAATGACCCTACAAAATACGCAATGAAACCAGAAGATGAACCACATATAATGTTCAAGAGCGTGCCGAGCATACCGCCCCCGGAGCGGGCGCGGGAGGTGATGCATTGCAACGCCGTCATCGACATCATAACCAAGGCGGTGGCGGTCGCACAGCGGGAAAACGAAGACTCTCAAAAGTATCCGCCGAACTACACTAGCGTCATAGATAGAACACACTCTCTCAGCTCCAGCGACGTCAAATACTCACATGAATATCAAGAAGACCAGTATAATATGTACAACGTGTCACAAAATGCCCAGAGTCCCAGTAGTAACGACGACCATGACAACAAAGAAATGGACCTCTCATTATATGGAACAGTTAAAAACGAGCCTGCTGAACAAAATGACAACTTAAATCGAGATGCTTCTTCATACTTCCATGATAATTTACCACATAACAAATCTTCAAATTATGCGGAGGAGTACAAGCCGACGCTGTTTGGTAGATCATCTGGCAAGACGAAAACGTCAAAAGATAACTCGTCGGTGTATGAGGAGGGTAGTCAGAGCAGTAGCGGTTCAGATCCAGACAGATTACAAATGGATATTTCTCAGATGTCGCAGGACGATCCTGAAGAAACTCAGTCGGCGCGGTCGACGCAGTCATCTCCACAGCCCCATGAAAATGAAAACGATAAGGAATCACTCTGGCAAGCGCTGCATAGACAAAATGGTCGTGGCGGAGAAGCGACGCAGTTGCTGAAGCGATTGATCAACAGCAAGCACCTAGGGATGACGGTGTCGCCGCTGAGAGCCACTACTACCTCGCCCCTCGCAGCCACCGTGCAACAGCCGGCTAACGGCGCCGTATCACCGAATGGCGAGTGGCAGAGCTCGGGTCGTGGGTCCGCCGCAGCGGGAACAGCTCGTAGGAAACAAAGCTTCCCTGCTCGCGCGCAACCGCCCGCGCTCGCCGACGCGCCCGCCACCGCGCCTTGGCCGCAGCCGCCCGCTGACAACGAGCAAACGGATGCGTCTGGCGTCGGTGGTAGCAACGCCAGAGGAGGCGCGCGCGTGGAGCTCGCATGCACCAACTGCGGCACGCACACGACCACGATATGGCGACGCGACGCGCGCGGCGAGATGGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGCGTGCCGCGGCCCACCGCCATGCGCCGCGACACTATCCacacgcgccgccgccgcccgcgccacGACGCCAAGCACGCGCGCAACAAACGGCGGAGCGCAGGCGCATGCACAGAAGGGAACGAGACGAGTGGGGGTGCGGGCGGGGCCGTGGCGGCTGGAGCGGGGGGCTTGGGCgtggggggcgcgggcgcggggggcgcggcgggGGAGGGGGGCGCCGACGAGACCATGCTGGCGGCGCTGCGGCGGCAGCTGCAGCCGCACCTGCTGGCCGCACTGCACGCGCACACGCATCGCCCGCAGGTGGGGCTAAACGCGCCAGAATACGACGAGGCGCCGCTAAACTTGGTGGCGAGCCACGCCGCCGCCGAGGAGACCCACTGA
- Protein Sequence
- MGSPDSTEELKNSESRQAAVALLSIRHNDPTKYAMKPEDEPHIMFKSVPSIPPPERAREVMHCNAVIDIITKAVAVAQRENEDSQKYPPNYTSVIDRTHSLSSSDVKYSHEYQEDQYNMYNVSQNAQSPSSNDDHDNKEMDLSLYGTVKNEPAEQNDNLNRDASSYFHDNLPHNKSSNYAEEYKPTLFGRSSGKTKTSKDNSSVYEEGSQSSSGSDPDRLQMDISQMSQDDPEETQSARSTQSSPQPHENENDKESLWQALHRQNGRGGEATQLLKRLINSKHLGMTVSPLRATTTSPLAATVQQPANGAVSPNGEWQSSGRGSAAAGTARRKQSFPARAQPPALADAPATAPWPQPPADNEQTDASGVGGSNARGGARVELACTNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDAKHARNKRRSAGACTEGNETSGGAGGAVAAGAGGLGVGGAGAGGAAGEGGADETMLAALRRQLQPHLLAALHAHTHRPQVGLNAPEYDEAPLNLVASHAAAEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00682991;
- 90% Identity
- iTF_00036290;
- 80% Identity
- -