Basic Information

Insect: Catoptria pinella
Gene Symbol: -
Assembly: GCA_963556745.1
Location: OY750787.1:1622118-1631235[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.2 3e+02 2.7 3.4 1 23 379 401 379 401 0.97

2 9 0.00018 0.013 16.4 7.2 1 23 449 472 449 472 0.95

3 9 0.043 3.1 8.9 0.6 1 23 477 499 477 499 0.97

4 9 0.0002 0.014 16.3 8.3 1 23 507 529 507 529 0.98

5 9 9.5e-06 0.00069 20.4 0.9 1 23 534 556 534 556 0.96

6 9 1e-05 0.00075 20.3 1.5 1 23 565 587 565 587 0.99

7 9 3.8e-06 0.00028 21.7 0.9 1 23 593 616 593 616 0.98

8 9 2.1 1.5e+02 3.6 2.3 1 12 622 633 622 634 0.92

9 9 0.41 30 5.8 5.5 1 23 653 676 653 676 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.2	3e+02	2.7	3.4	1	23	379	401	379	401	0.97
2	9	0.00018	0.013	16.4	7.2	1	23	449	472	449	472	0.95
3	9	0.043	3.1	8.9	0.6	1	23	477	499	477	499	0.97
4	9	0.0002	0.014	16.3	8.3	1	23	507	529	507	529	0.98
5	9	9.5e-06	0.00069	20.4	0.9	1	23	534	556	534	556	0.96
6	9	1e-05	0.00075	20.3	1.5	1	23	565	587	565	587	0.99
7	9	3.8e-06	0.00028	21.7	0.9	1	23	593	616	593	616	0.98
8	9	2.1	1.5e+02	3.6	2.3	1	12	622	633	622	634	0.92
9	9	0.41	30	5.8	5.5	1	23	653	676	653	676	0.96

Sequence Information

Coding Sequence: ATGTTGCACAACACAGGGCTTTACGGGCCAAACGAAACTCCGGTGAACATGGGAGCGCCTAAGATACCAAATCTTGCATCACCGATGAATATTGCTCCAAACTTCAATAACTTCGTGAAAATGTCGCAACAAACATCTCATCCGTCTTCAGAGCACTTTAATCTACAGAACTATGTGGGTTACGCCGGCACAACGATTAGTAGTAGCCCTCAAATGAGTGTGTTTCCAAATAACAGATACACTGACATTGAGTCGAATTCTTTTACCTCACATAGTACGAATCAGTACTCGAATCCGATACAACACAACGGAAGCCTCCTAGAAAACGTTTATAACAACGAAGATTGCCAAAAAGCCATAGATTTTTCCAATATGCGACACAATGGAAGTCTCTTAGAAAACGTTTTTGACAATGAAGAATGTCAAAAAGCTGTAGATTTTTCAAATATAACTAATAGTTTAGTACCAGAAAAACCTCACAAACCAACATTCAGTATAGTAGAAATGACCAATTTTTTGGCCTCCAGTTCAAATTCAACAGACAAGTATACAGATTTTCACACTAATTACAGTAAAAGTGAAGTTATTTCGGAGAAAAATAATGATACTAACGACTCATATGAAAATAGATACAATAATGTTCAGAGTCGAGTATCTAATGCTGAAGATAATTCTTCAGATGGTGAGTACAGTTCCAATGACTCCATCAAAGGAGAtgaccaaaataataaattgaactaCCTCAAGCACACAGAATACTTGTCTGAACACGAAGACAGCGATGAAGAGAGTATAAATGCATCAGAAAACGAAGACACTCTTAAAGAAGTAGTACCTAGAACAAATGACAGTTTAGAAGACGATAATGATTCAGATTCAAATGACACGAAACCGTTGAATCTTGTCCATTTCATAAAACAAGAACCTTTAGACCATGAAGTACCTATAACTAATGTTGTCGTTAAAATTGAACAGATGTCGAGTTGGACTGATACAGATCATATGCAACCTTTTCTGAAAGACATGAATGGTGTTTTGCGAGAAGATTGTAGTGTTACAAACATAGTGgattgttacaatagcattgcTGAAGCTACGGAAATAGTTAAAAATGGTATGACTATGGATGTGAGTTTTGAATGCCCTAGTTGCTGTCTTATATTCAGCCATCCTAAAAGGTTTCTCATACACACAAAATGGCATTCCCTTGGACTTGTTAAGGTGAAGAAGACCGAAGATGCCAAAGAGAAAATGGCATGTCGTAAGCAGAAGAAAGAGATGAAAGACTTGGTGAAGAAAGAGGCGGCTAAGGTCAAAGCCGAAGAGAAAGCGGCGCTAGAAATGTTTGACTGCAAGAACTGTGACAAAAAGTTCAATACCAAAAGTAAACTCAGGAACCATAGACACAAATTCCACCCAAGTCGCGAGCACGAATGCAAAGTATGTCAGAAGAAGGTGTTAGGTTGGTTCGGGCTACAGACACACATGGCGACCCATGGTAGCGACGGGGTGACCGACTTTGAGTGCCAAGTTTGCCACAAGCGGTTTAAGCACTCGCACTCACTGGCCAAACACAGAGACACGCATTTGGAAAAAACCCATGCTTGCGCTGAATGCCCGAAGAAGTTTGGATCTCAGACTCTCCTCAAGATCCACATGAGGAGCCACGAGCGCACGCAGCGAGGGAGGACGTTCAGATGTTCCTATTGCGGGAAGGGCTTCTACGAGGCGTACACATtacagTACCACGAACGTACGCATAGAAACGAGCGACCGTTCAAGTGTGACATTTGCGAGACCAGCTACGGGACCAACTCGAGCCTCAAGCGGCATCTCAAAGTGTCCCATTCCCAAGCGAAGCCCTACGAATGTGATACTTGTCGTCGTTGCTTCGCCACAGAGCTGATACGAGACAGGCACGCGGCGCGCGAACACGGGACCCCGGGACAACTGAAGTATGCGTGCACTCACTGCACTAGCAGGTACTTACGACACAAAGATCTACAAAGGCACATGTACAGAATACACCCAAAAGGTAAAAAAAGGAGAAAAGTGAGCGAAAGTGAATAG
Protein Sequence: MLHNTGLYGPNETPVNMGAPKIPNLASPMNIAPNFNNFVKMSQQTSHPSSEHFNLQNYVGYAGTTISSSPQMSVFPNNRYTDIESNSFTSHSTNQYSNPIQHNGSLLENVYNNEDCQKAIDFSNMRHNGSLLENVFDNEECQKAVDFSNITNSLVPEKPHKPTFSIVEMTNFLASSSNSTDKYTDFHTNYSKSEVISEKNNDTNDSYENRYNNVQSRVSNAEDNSSDGEYSSNDSIKGDDQNNKLNYLKHTEYLSEHEDSDEESINASENEDTLKEVVPRTNDSLEDDNDSDSNDTKPLNLVHFIKQEPLDHEVPITNVVVKIEQMSSWTDTDHMQPFLKDMNGVLREDCSVTNIVDCYNSIAEATEIVKNGMTMDVSFECPSCCLIFSHPKRFLIHTKWHSLGLVKVKKTEDAKEKMACRKQKKEMKDLVKKEAAKVKAEEKAALEMFDCKNCDKKFNTKSKLRNHRHKFHPSREHECKVCQKKVLGWFGLQTHMATHGSDGVTDFECQVCHKRFKHSHSLAKHRDTHLEKTHACAECPKKFGSQTLLKIHMRSHERTQRGRTFRCSYCGKGFYEAYTLQYHERTHRNERPFKCDICETSYGTNSSLKRHLKVSHSQAKPYECDTCRRCFATELIRDRHAAREHGTPGQLKYACTHCTSRYLRHKDLQRHMYRIHPKGKKRRKVSESE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00036122;
90% Identity: -
80% Identity: -