Basic Information

Insect: Catoptria pinella
Gene Symbol: -
Assembly: GCA_963556745.1
Location: OY750785.1:2646206-2650077[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.21 15 6.8 3.0 1 23 251 273 251 273 0.97

2 10 0.029 2.1 9.5 0.8 2 23 300 322 299 322 0.94

3 10 5.5e-05 0.004 18.0 0.2 1 23 345 367 345 367 0.98

4 10 1.3e-05 0.00096 20.0 0.5 1 23 371 394 371 394 0.97

5 10 0.0023 0.16 12.9 1.5 1 23 399 422 399 422 0.90

6 10 0.021 1.5 9.9 1.7 1 23 428 451 428 451 0.91

7 10 8.9e-08 6.4e-06 26.8 2.7 1 23 458 481 458 481 0.98

8 10 0.0042 0.31 12.1 6.1 1 23 487 509 487 509 0.98

9 10 3.8e-07 2.7e-05 24.8 1.6 1 23 515 537 515 537 0.99

10 10 8.6e-05 0.0062 17.4 2.1 1 23 543 565 543 566 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.21	15	6.8	3.0	1	23	251	273	251	273	0.97
2	10	0.029	2.1	9.5	0.8	2	23	300	322	299	322	0.94
3	10	5.5e-05	0.004	18.0	0.2	1	23	345	367	345	367	0.98
4	10	1.3e-05	0.00096	20.0	0.5	1	23	371	394	371	394	0.97
5	10	0.0023	0.16	12.9	1.5	1	23	399	422	399	422	0.90
6	10	0.021	1.5	9.9	1.7	1	23	428	451	428	451	0.91
7	10	8.9e-08	6.4e-06	26.8	2.7	1	23	458	481	458	481	0.98
8	10	0.0042	0.31	12.1	6.1	1	23	487	509	487	509	0.98
9	10	3.8e-07	2.7e-05	24.8	1.6	1	23	515	537	515	537	0.99
10	10	8.6e-05	0.0062	17.4	2.1	1	23	543	565	543	566	0.95

Sequence Information

Coding Sequence: ATGGAGCTTATAAAAAGACAAACAAGCTACGGGCAATGCAGATGTTGCTTAGCCAAGGGATACCACCGCGACATCATGAGGGAATATTATTGCAATGGGATACGCGAAGTTTATTACGACATCTTCATggaatgttttaatttatttTTATCAACAGACATGAATTTGAGCAAGCTGATATGCCAGTCATGCGTACAACGGCTCAGAGAGGCGAGCAGCTTTCGCATGATGGTGGCGGCTACAGAGCGACAGCTGCTAGAAGCACTCAGGGAGACCGACAAAAAGGAGATGGTGTTTGTTAAtgTGCCCGTAGAAGACATTCTGGTTGACTCATCTGTGAAACGAGAAGAGCTGGCCATCAAGTTTGAACCTAACGACGATGACTGCCCCGACCTGGACCCAGATTATGTGCCTGACGAGGAGTATGAGGAGATTGCAACAGCAGAAACACCAGTCAGTACTGACCTGGTGCCAGGCGAGGCGGAACTCATATCCAGGTTTCCTTTCCGAGCGTTGCCCTCCAGGAACAATATGCACAAGATATGCCCCGAGTATGCCAGAAGACTCAACTTACTCAAAGgaATAATAGTAATGCCCAGCACAATCGGAAAACTACTCGAAGAAGACCTTAAATCTAAATACAGCTACAAAAGAGTATTCGTCTCAGAAAAGATGGCACAGATTATAAATGCTTCCACACTTCTAGAACATTCAAACTTAACTCCATTTAGAAGCAGAAGTAGAAACGGATTCCCTTGCTTTTACTGCAGACATCTTTTTGACAATCTTGACAGATTAAAAGAACACACTAAAGAACATAAAAAGAGTGAATTACAAAAAGTGTTAAGAACTTATGGTGCCGAGTGCTTAGTTGTTTATGCTGATGTCACTAACTTATGCTGCACTATATGTAATACAACAATACCGAGCTTGAATGAACTCAAAATACATTTGACAAgagaacacaaaaaaaacatgtatttgGATCACAACGACCGAGTTATACCTTTCAAGTTATCACCAAACAACATATACGAGTGTCAAATCTGTGGCTTCAACTTTGAAACCTTCGGATCAATAGAGAGACATATGAATGTTCATTTCAGGAACTACGTTTGTAAAGACTGTGGCACTGGATTTGTGACTAGATATCGTTTAAAAGTGCATGTTAAAAGTATGCATGTAGGGGGCAGTTTCCCTTGTGAAATATGCAAGAAAGTCTTCAGTACccagcaaaaacataaaaaccatGTGAATGCTGTGCATAAGTTAATGAAAAGGTTTAAGTGTACTAAGTGTCCGGAACGGTTTTCTGAGTACTTTAGGAGGCAACGGCATATGGTTGAAGAGCATGGGTTCGCTCCTTTACGATACAagtgcaatgtttgtgataaatCTTTTGATAGAAGATATACGCTTTCAAGGCATATGAAGAGAGACCACTTAGAAGAACGAGACTTCCAATGCCATTTGTGCTCGTATAAATGTTTTACTAACAACGAATTAAGGGTACACATGATAAAGCATAATGGTGAAAGAATATATGAGTGTTCTGTTTGTAAGAAATCTTATGCTCGGAAGAAAACTCTTAAAGAACATATGAGGATACACAATAATGATAGAAGGTTCGCTTGCGCGGTTTGTGGACAAGCTTTTGTTCAGAAATGCAGTCTGAAAGGGCATTTGAAGACACATCATCATGAATATAATTTGCAATGA
Protein Sequence: MELIKRQTSYGQCRCCLAKGYHRDIMREYYCNGIREVYYDIFMECFNLFLSTDMNLSKLICQSCVQRLREASSFRMMVAATERQLLEALRETDKKEMVFVNVPVEDILVDSSVKREELAIKFEPNDDDCPDLDPDYVPDEEYEEIATAETPVSTDLVPGEAELISRFPFRALPSRNNMHKICPEYARRLNLLKGIIVMPSTIGKLLEEDLKSKYSYKRVFVSEKMAQIINASTLLEHSNLTPFRSRSRNGFPCFYCRHLFDNLDRLKEHTKEHKKSELQKVLRTYGAECLVVYADVTNLCCTICNTTIPSLNELKIHLTREHKKNMYLDHNDRVIPFKLSPNNIYECQICGFNFETFGSIERHMNVHFRNYVCKDCGTGFVTRYRLKVHVKSMHVGGSFPCEICKKVFSTQQKHKNHVNAVHKLMKRFKCTKCPERFSEYFRRQRHMVEEHGFAPLRYKCNVCDKSFDRRYTLSRHMKRDHLEERDFQCHLCSYKCFTNNELRVHMIKHNGERIYECSVCKKSYARKKTLKEHMRIHNNDRRFACAVCGQAFVQKCSLKGHLKTHHHEYNLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00035978; iTF_00382969; iTF_00319176; iTF_00448387;
90% Identity: iTF_00035978;
80% Identity: -