Basic Information

Insect: Catoptria pinella
Gene Symbol: -
Assembly: GCA_963556745.1
Location: OY750786.1:1638861-1641469[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.09 6.5 7.9 4.9 2 23 234 255 233 255 0.95

2 11 0.0011 0.082 13.9 4.4 1 23 267 289 267 289 0.98

3 11 0.00038 0.027 15.4 4.3 1 23 297 320 297 320 0.95

4 11 0.087 6.3 8.0 0.6 2 23 327 348 326 348 0.95

5 11 9.4e-05 0.0068 17.3 7.8 1 23 354 376 354 376 0.97

6 11 3.6e-08 2.6e-06 28.0 0.8 1 23 382 404 382 404 0.96

7 11 3.1e-07 2.3e-05 25.1 0.3 1 23 410 432 410 432 0.99

8 11 8.8e-07 6.4e-05 23.7 0.4 1 23 438 460 438 460 0.98

9 11 4.3e-05 0.0031 18.4 0.5 1 23 466 488 466 488 0.98

10 11 5.2e-05 0.0038 18.1 2.1 1 21 494 514 494 516 0.96

11 11 2.5e-07 1.8e-05 25.4 0.7 1 23 522 544 522 544 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.09	6.5	7.9	4.9	2	23	234	255	233	255	0.95
2	11	0.0011	0.082	13.9	4.4	1	23	267	289	267	289	0.98
3	11	0.00038	0.027	15.4	4.3	1	23	297	320	297	320	0.95
4	11	0.087	6.3	8.0	0.6	2	23	327	348	326	348	0.95
5	11	9.4e-05	0.0068	17.3	7.8	1	23	354	376	354	376	0.97
6	11	3.6e-08	2.6e-06	28.0	0.8	1	23	382	404	382	404	0.96
7	11	3.1e-07	2.3e-05	25.1	0.3	1	23	410	432	410	432	0.99
8	11	8.8e-07	6.4e-05	23.7	0.4	1	23	438	460	438	460	0.98
9	11	4.3e-05	0.0031	18.4	0.5	1	23	466	488	466	488	0.98
10	11	5.2e-05	0.0038	18.1	2.1	1	21	494	514	494	516	0.96
11	11	2.5e-07	1.8e-05	25.4	0.7	1	23	522	544	522	544	0.98

Sequence Information

Coding Sequence: atggaaGAAGCTATAAAACTGAACCCAGATCTTTTCTGCCGAACTTGTTTGAACGAGTCGGTAAACATGGTGTCGATTACTAAGGTGCTGGGTGGAAAACGAACGCTCGCTGATGTCCTCTCATTTGTCTCAAACACTACCATAAAATGTGATGAAAAGCTTCCAAAACACATATGCGTGGACTGTGAGACAATCGTGATTAAAGCAGAGGAGTTTCGACAGAAGTGTATTGAGTCCCAAAAACTTTTGTGCAAGATATTCGGCAGTTTTGTTGATGAGCCTTCAATCACgattcgtaaaataaaaatggaaaagagctctaaaagtgataaaaaactTTCTCTATCTCAGaccaaaaatattataggtagaTTAAAACAAGAAGAAAACATGAAGCCGACCCACAATGTTGTAGAAGTAAAATTCGAAGAAATCATGAAGAATGAACTGGATGCCACATCATGTGGCTCGGACGAAGTCGTTGCACGGTTTGAGTTAAAGAGGGCAATTAAAGCTGaagtttcagatttttctgaTGATAATGATATTGATATAGACTTTGTAGACAATACTGAAGCAACAACTTTAGAAAATGACATCGGGTTTTTGTATGCTTACGAGGTTACTAAGAAAGAGGAAGAGAAAGACGAACACAATCCTTTAGAATCTAACAACCCAAAAAGGTACATGATACCAATTAAATGCGAGTGTTgtaatagaatatttaaaactgaaaaaacTTTTATGAAACATAAAAAGATACATTTAGAGAGTAGACTTGAAACGGAGGTAGAAATCTTTCAATGTTCATTGTGTATGAGAAAATTTAAGAAGAAAAGTTCATTGATAGCTCATTTAAAGCACCATGAGATGAGAGATAGTATAAAATTTGTTTGTGAAACGTGTAAACGTGAATTTAAGCACCAAGGACATTTAGACAAACACATCACTTATATGCATAGAGAAAAAGAGGGTTTGCCTTGTGAATATTGTTTCTGCATCTATCCCAATCAGGAAACATTAGACATTCACAaggaaaaacataaaaaagaaaaaagacacTGCTGTCATATATgtaataaatcattcaatatgtTGTCGACGTTAACAGATCATTTGCGGACACATACTGGTGAGAAACCGTACTTGTGTTCGATATGCGGTAAAGGTTTTAGTCAAAAGACTAATTTGGCTCAACATATGAGACGGCATTTGGGACTTAAGCCTTATAAATGTAAAGAATGTGATAGAGGGTTTGTATCAAAAGGAGAGCTCGAAGCCCACGTGCGCAAGCACACCGGCGCGCACCCGTTCGTGTGTAGCGAGTGTGGGGGCGGGTTCACTACTTCCAGCTCGCTCGTGAAGCACCGACGGACACATACCGGGGAGAGGCCATATGCGTGTGATTTGTGCCCGATGAAGTTTACTGCTTCTGGCACCCTCAAAAACCACAGACGCACTCACACCGGAGAGAAACCTTACCAATGCTCGTACTGTGAAAAAGCATTCGTCCAAAGACAAGATTTGGTCTCCCACATCCGGTGTCACACTGGAGAGAGGCCAtttgtatgtaatgtatgtgGTCAGTCGTTCAGGAAGTCTTCGGGACTTAAGACTCACGTGAGAATGCATAAGGAAACAAACATGGACTTATCCAGTAGTGTTATGTTGAATGGAGTGACTGGGACGTTcggtacagcttga
Protein Sequence: MEEAIKLNPDLFCRTCLNESVNMVSITKVLGGKRTLADVLSFVSNTTIKCDEKLPKHICVDCETIVIKAEEFRQKCIESQKLLCKIFGSFVDEPSITIRKIKMEKSSKSDKKLSLSQTKNIIGRLKQEENMKPTHNVVEVKFEEIMKNELDATSCGSDEVVARFELKRAIKAEVSDFSDDNDIDIDFVDNTEATTLENDIGFLYAYEVTKKEEEKDEHNPLESNNPKRYMIPIKCECCNRIFKTEKTFMKHKKIHLESRLETEVEIFQCSLCMRKFKKKSSLIAHLKHHEMRDSIKFVCETCKREFKHQGHLDKHITYMHREKEGLPCEYCFCIYPNQETLDIHKEKHKKEKRHCCHICNKSFNMLSTLTDHLRTHTGEKPYLCSICGKGFSQKTNLAQHMRRHLGLKPYKCKECDRGFVSKGELEAHVRKHTGAHPFVCSECGGGFTTSSSLVKHRRTHTGERPYACDLCPMKFTASGTLKNHRRTHTGEKPYQCSYCEKAFVQRQDLVSHIRCHTGERPFVCNVCGQSFRKSSGLKTHVRMHKETNMDLSSSVMLNGVTGTFGTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00035939;
90% Identity: iTF_00035939;
80% Identity: -