Ccar025997.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- MTA1
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000003.1:4715719-4730204[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.8 7.3e+03 -1.5 0.2 15 23 25 33 23 34 0.84 2 3 9e-09 8.2e-05 23.9 9.7 1 35 37 73 37 74 0.96 3 3 1.9 1.7e+04 -2.7 0.1 26 35 118 127 118 128 0.83
Sequence Information
- Coding Sequence
- atgtactgcaatagtgcagcTAATAAACCAAATCCAgcagttataaataataataaaggaaTAGTTAATGGGAATAGTAATGGTGAAACACTACTATGTGGAAAGGGTTGTGAATCTTGTAATGTTACTATGTCAAACCAATGGTATTCATGGGGTCCCAGCCACATGATGTGTAAATTATGTTCGACCTGTTGGCAGTATTGGAAAAAATATGGTGGTCTAAAGGTTCCAACTAGAATAGGTGATAATGAAATGGACGTAGTAAAAAAGAAGTCTGGAAGTATATCGGATGAAGaaCGGGCACCATCCAGTCTAACGTCGCATAGGCCTCACCGTTGCAGTATTATTGGTTGTGGCAAGgaatttaaattaaaagcaCACCTCGCCCGGCATTATGCTACTGCACACGGCTTGGCTATCAGGTCAGGATCGCCCCGACCGATCATGAAAACGAGAACGGCATTCTATCTGTGCACAACACCTCTTACCAGGATCTCAAGAAGACTGTGTCGACACCTTATGCTACCTAGGCATGCTGCGCGGTCACCATTTTGGCCGATCAATGTGCCCGCTATCAAACAGGAATGTGAGTAG
- Protein Sequence
- MYCNSAANKPNPAVINNNKGIVNGNSNGETLLCGKGCESCNVTMSNQWYSWGPSHMMCKLCSTCWQYWKKYGGLKVPTRIGDNEMDVVKKKSGSISDEERAPSSLTSHRPHRCSIIGCGKEFKLKAHLARHYATAHGLAIRSGSPRPIMKTRTAFYLCTTPLTRISRRLCRHLMLPRHAARSPFWPINVPAIKQECE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -