Ccar054451.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- Gata5
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000017.1:5712713-5719844[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-20 2.8e-16 60.6 4.3 1 35 23 56 23 57 0.98 2 2 0.3 2.8e+03 -0.2 0.3 3 11 100 108 99 114 0.81
Sequence Information
- Coding Sequence
- ATGCTTCGTCCACATCATCAAATTTACacatttttgatcGCTAATTCTCGACGTGTTGGACTGCAATGTAGTAATTGTGGTACAAGTACGACATCACTTTGGAGGAGAAATTCAATGGGTAACCCGGTATGCAATGCATGTGGCCTTTACTTTAAGTTGCATGGTGTGAATCGACCTTTAGCTATGAAAAAGGACAGCATTCAGACAAGAAAACGGAAACCTAAAGGTGGTGGTAAAACTGATCCAGATGTCGTGCCTATGAAAAGAATCAAATTGGAACATAATGATACATTTAATGAATGTCGTACGAGTAATACTTTATTAAATCATACAAATTCACCTTTGACTTACCAAAATTTGTACGGAGCGTCGCATCACACATTGTACTACGATACATTAGCTGTAAGTAAACCGGAAAGTTCTCCCATTACGAACGATCAATCTCCACACATTGtatcattagcaactacaaaaTTAGATCGACCAAGTGTTGTTTCTATTTCATAa
- Protein Sequence
- MLRPHHQIYTFLIANSRRVGLQCSNCGTSTTSLWRRNSMGNPVCNACGLYFKLHGVNRPLAMKKDSIQTRKRKPKGGGKTDPDVVPMKRIKLEHNDTFNECRTSNTLLNHTNSPLTYQNLYGASHHTLYYDTLAVSKPESSPITNDQSPHIVSLATTKLDRPSVVSIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -