Ccar054454.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- pnr
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000017.1:6008041-6040066[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-18 1.7e-14 54.9 3.2 1 34 27 59 27 61 0.97 2 2 1.2e-19 1.1e-15 58.7 5.5 1 35 81 114 81 115 0.98
Sequence Information
- Coding Sequence
- ATGTGGAGGGCGTACGATTATAACAATCCATCACACTACGACAACGGAATGGAATTTCAAGTTGGGGAAGGTAGAGAGTGCGTCAACTGCGGGGCAATCTCGACCCCGTTATGGCGTCGTGATGGTACCGGTCATTACCTGTGCAATGCATGCGGTCTCTATCACAAGATGAATGGCATGAACCGTCCATTAGTTAAGCCTGCTAAACGCCTTacaGCGACCAGACGTCTAGGTTTAAGTTGCAGCAATTGTGGTACAAGAACAACGACTTTATGGAGAAGAAACAACGAAGGAGAGCCTGTGTGTAATGCGTGTGGCCTATACTTTAAATTACACGGAGTAAATCGTCCGTTAGCGATGCGAAAAGATGGTATACAAACGAGGAAAAGAAAACCGAAGAAAACTTCATCGTCTTCCTCGTCGTCATCTTCCCAACAAATCGAATCTACAGCGTCTTCGACACCTTCAAACTCTACAGatTGTAAATCGGATAGAGAACGTCCATATTTAGGACATACGTCATTACTTCCCAGTGTGAAAACGGAACCTAATTCTTCATACAATGAAAATCCATCTTCAGATACGTCATCGTATTATCCATCGATGTCATTTTCATCACcgcatcaccatcatcatcacgGTCcacatcatcatcaccatcatcctCAGATCGGTTTTGGATTTTCTCAAAGCCACACCCATCACCCGACTACACCGACTGGATATCATCACCATATTGGACCCAAAATTATGGCGACTACTTAA
- Protein Sequence
- MWRAYDYNNPSHYDNGMEFQVGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRLTATRRLGLSCSNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTSSSSSSSSSQQIESTASSTPSNSTDCKSDRERPYLGHTSLLPSVKTEPNSSYNENPSSDTSSYYPSMSFSSPHHHHHHGPHHHHHHPQIGFGFSQSHTHHPTTPTGYHHHIGPKIMATT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -