Basic Information

Insect: Catonia carolina
Gene Symbol: -
Assembly: GCA_035578175.1
Location: JAQMRL010000004.1:62802607-62822151[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 8.3 1.3e+03 1.9 0.1 3 23 568 588 566 588 0.92

2 26 0.0011 0.17 14.1 1.4 3 23 638 660 636 661 0.93

3 26 0.00051 0.08 15.2 2.4 1 23 719 742 719 742 0.97

4 26 0.037 5.9 9.3 2.3 2 22 752 772 751 772 0.94

5 26 0.099 16 8.0 0.7 1 23 843 866 843 866 0.95

6 26 0.0021 0.33 13.3 0.2 1 23 918 940 918 940 0.96

7 26 8.6 1.4e+03 1.9 5.7 1 23 946 968 946 968 0.98

8 26 0.014 2.2 10.6 0.8 1 23 976 998 976 998 0.93

9 26 0.00044 0.071 15.4 0.9 1 23 1004 1026 1004 1026 0.98

10 26 0.00058 0.091 15.0 0.6 1 23 1071 1093 1071 1093 0.96

11 26 0.19 30 7.1 4.7 2 22 1107 1127 1106 1130 0.90

12 26 0.031 4.9 9.6 0.7 2 21 1157 1176 1156 1177 0.93

13 26 0.15 23 7.4 4.0 1 21 1198 1218 1198 1219 0.95

14 26 6.2 9.8e+02 2.3 1.4 5 21 1239 1255 1236 1256 0.88

15 26 0.12 19 7.7 1.6 3 21 1334 1352 1333 1353 0.92

16 26 0.031 4.9 9.6 0.2 2 21 1370 1389 1370 1390 0.93

17 26 3.8 6.1e+02 3.0 0.8 6 22 1414 1430 1411 1433 0.87

18 26 0.049 7.8 8.9 1.1 2 22 1458 1478 1457 1478 0.94

19 26 6.4 1e+03 2.3 1.0 1 19 1513 1531 1513 1534 0.92

20 26 0.017 2.6 10.4 0.8 1 23 1585 1608 1585 1608 0.92

21 26 0.00017 0.028 16.6 2.6 2 23 1626 1647 1625 1647 0.95

22 26 0.0068 1.1 11.6 1.0 1 23 1695 1717 1695 1717 0.98

23 26 2.5e-05 0.0039 19.3 1.9 1 23 1751 1773 1751 1773 0.98

24 26 6.2 9.9e+02 2.3 0.1 2 14 1796 1808 1795 1808 0.86

25 26 0.061 9.7 8.6 2.7 1 23 1852 1875 1852 1875 0.96

26 26 0.0089 1.4 11.3 1.4 1 21 1952 1972 1952 1976 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	8.3	1.3e+03	1.9	0.1	3	23	568	588	566	588	0.92
2	26	0.0011	0.17	14.1	1.4	3	23	638	660	636	661	0.93
3	26	0.00051	0.08	15.2	2.4	1	23	719	742	719	742	0.97
4	26	0.037	5.9	9.3	2.3	2	22	752	772	751	772	0.94
5	26	0.099	16	8.0	0.7	1	23	843	866	843	866	0.95
6	26	0.0021	0.33	13.3	0.2	1	23	918	940	918	940	0.96
7	26	8.6	1.4e+03	1.9	5.7	1	23	946	968	946	968	0.98
8	26	0.014	2.2	10.6	0.8	1	23	976	998	976	998	0.93
9	26	0.00044	0.071	15.4	0.9	1	23	1004	1026	1004	1026	0.98
10	26	0.00058	0.091	15.0	0.6	1	23	1071	1093	1071	1093	0.96
11	26	0.19	30	7.1	4.7	2	22	1107	1127	1106	1130	0.90
12	26	0.031	4.9	9.6	0.7	2	21	1157	1176	1156	1177	0.93
13	26	0.15	23	7.4	4.0	1	21	1198	1218	1198	1219	0.95
14	26	6.2	9.8e+02	2.3	1.4	5	21	1239	1255	1236	1256	0.88
15	26	0.12	19	7.7	1.6	3	21	1334	1352	1333	1353	0.92
16	26	0.031	4.9	9.6	0.2	2	21	1370	1389	1370	1390	0.93
17	26	3.8	6.1e+02	3.0	0.8	6	22	1414	1430	1411	1433	0.87
18	26	0.049	7.8	8.9	1.1	2	22	1458	1478	1457	1478	0.94
19	26	6.4	1e+03	2.3	1.0	1	19	1513	1531	1513	1534	0.92
20	26	0.017	2.6	10.4	0.8	1	23	1585	1608	1585	1608	0.92
21	26	0.00017	0.028	16.6	2.6	2	23	1626	1647	1625	1647	0.95
22	26	0.0068	1.1	11.6	1.0	1	23	1695	1717	1695	1717	0.98
23	26	2.5e-05	0.0039	19.3	1.9	1	23	1751	1773	1751	1773	0.98
24	26	6.2	9.9e+02	2.3	0.1	2	14	1796	1808	1795	1808	0.86
25	26	0.061	9.7	8.6	2.7	1	23	1852	1875	1852	1875	0.96
26	26	0.0089	1.4	11.3	1.4	1	21	1952	1972	1952	1976	0.92

Sequence Information

Coding Sequence: ATGAGTTGTGATATAGATATATATAATGTAAATGAATTATGTCGACTTTGTTTAAGTGGTGATGGAACTATATTGCCAATATTCGGTTTAGAACATTCATCAATAGATTGCATTCCTCTGTCTTATAAAATTAAGGCTTGTGTTTCAGTCGAGATAAACAAGAATGATATACTTCCAAAGAAGATTTGCGTCAGCTGTGTACATCAGGTTGATTCCTGGCACAAGTTCAAATCAGTCTGTGACACTTCCCAAAGTAAACTTCAATCGTGGTATAAATCACAGTTCCCCGATGCCGATGAAAACAGCAGATCATCTCAGCCGgtacaAGGAGAAGTGAAACAGGAATATGAGGATAACATTGATGATGATGACGTAGTTTGTTGTAATGATGTGCCAGGTGCCAGTCTTCATTCCACATTAATCGCACCATTGCCTGTAGATGTAATTTTAGTAGAAGATGACGATGATGCTGATGACAATTGCAATGGGGATTTCCATCATGATGAAGATGACAGTGAAAAAGAAAACGATATGGAAGTTGAAGATGGTTTTGGCAATGAAAAATCAGGTGATAAAACTCGTAACAGTGGAGAGGTAATCGGTAATAAATCAAGTTCTTCAAAAAAATCACCTATAACAAATGGCGATTTTGATTCAGTTGGTTCGAGTAAAAATAAACAGGTTGAATCTACCAACAAAAACCTAGTTAATGGaatcgaaagaaataaaaataataattcttttgaTGACAGTTGGTTTGACGGTGATGAACTAATGCTTGCCGATTTTAGAAATGAAGTTGCACCAGACGTTGAATTAAGCCAAGAAGATGTTGATAAGGTAAAAGAAAAAGAGATCATTGTGGAAAATGAATGTGTCAACAATGACTGTACTGACAAAGAGGCAACTCCATCTCCTTCGGGTGATGGAGATGtttctattaaattattaaaagataaaagcAGTAATATTATCGATAGGATATCATCAGAGATAAATAGAAGACTGAGTTCCGATGATAATCCTGATTCGATAACTGCAAATTGTACGATTGCGAATGGTAGAAATGCTTCGGAAAGTGATGATAGAGGTGACGTAGATTCGATCAGTAATAACGATGTTGACGATATTGTGGAAGAAGATGATGAAATAGACGAACAAACAGTCGTTGAGAAACGAGAACTAAGACCGAGAACCAACCGGAATTATCGTACCGATTCTCTTTCATCATCACCAACTCTACCCGATCCTGGTTTAGTTATCGTGGAAGGTTTTAGCCTCTCTGATTACAATTCAGAAGCGAACAATGACATTCATAATTTACATCATCGGTTTGTACGACAGCCAGGCCCAGATCTGGAAATGTTGGATAATGTTAACAGCAATCATTCAAGTATGATGGAGgTGTTCCATGTTAAACAAGAACCACTTAGTCCGCCATCTTTGTTAAATTCCACAGTTGACGCTCCGGTTGGTTTGGATCCGTTAGATTTAAACGCTGGTTCTACAACTCCCGGTACTAACACTTCTACTACTACAACTACTATTAAAAAAGAAGTTGATGATTGGACGTTAATGACACCAGAACCGATCGATATAAAACCTGATATATCTTTGTTAAATACGATAGGCATGATCGACAATAACATCGAAACGCCAGGTAAACGCCGAAAATATCCCCAGTTTAAAAATGGTATACCTTGTGAACCGTGTAAATCAGCATTTCCAAATTATGTTAAATGGTTGAGACATACAAAATCGCATAAACATCAGCGTAATGTTGCACTGTTTGATATCAATAGAAGACCGTTTGCTCCAGGTGTTATTGATCCGGTACAGATGTTACAACAGCAATCAAATTACCTCCCGCCAAGGCCACCTAGGCAACCGATCGATTGCAGATTAAGCCCTTGTCCAATCGGAGGTTGTCAAGCGATGTTTAAACACAGGAGGAATTTAGTGACTCATGTCAGGACGCATCATGGATACCGCTTGAAAGATTTAGAAGCAAAGGCCGCTTTGTCAAAACAGCTGTCTTCAGAAAAACAATCGGTTACAACTTCTAATAATAATGCCGATCAAGTCGGTGGTAATGATGGTGCAAATGACGATGAAGACGATGGAGGTAACAATGATAATGGAGAAAAGAACATCTTCAAGTGTTCACATTGTCCGAAAACATTTGATTTAAGAATTTCATTGAAaagtcatttattaattaaacacaGAATTGCATCAATTTCAGCGAAGTTGCAATGTGAAAGGTGTTTCAAAAAATTTCATCGTAAAACTGGGCTTCTTAGTCATTTACGATCATGTGGAAAGTATATGAAATCTAGAAAATGTCCATATTGTTTGATTGTTCTTCCGACTTATAAGGAGACAGTTTATCATAAAAGTCGTTGTACAAAACGGTTTACTCCTTCATCAAATGTTCAGTCTATTAATAATAGttctggtggtggtggtggtgatggtACAGTTGGAAATAGTAATTTCAGTATGGTGCCAAATGAAGATGGAACATATTCTTGCGAATTTTGTAACATCACATTCGAAATCCAGTCGGTCTTTTACAATCATATGGAATTGTACCACGCTGGACATTTGGAAAGTCTACAGAAAAATGATGCAGGAGGTGACGGCGAAGAGAATAAAGAATCTTCGGAGAAAGATCCAGATTCATCAATTGGATTGACTACTAGTGAACAGCAGCAACAATTATCGGCAGATCAGGATGCGGATGGTAGATTTGCATGTCGCTATTGTGTGAAAACGTTTGCTGATGTGGAGGAGTTACAAGATCATATCAGCTATCATGAtatcaataaaatattccaaTGTAAATTATGCTTTGTGACGTTGAATTGCAAGCGATATTTTCAGGATCACATGCGATCTCATTTCATTCAACATCGAGGACAGTACCTTTGTTGGACTTGCTTTAAACCGTTCGACAATCGACGTGATTTAACTGCTCATAAAACGTTACACATTCAGTTGAAAATCTATTCGTGCAATGTTTGTGACCTTTCATTCAACAGCATATTAACTCTTGAACGTCATAAGAAAACTCACAGTCAAACAACTCCAGACAAATCAACTGAAAATGATAATGTTGAAGACACTAATGATGTGGATAAACAAAACACAATTGAAACATCAAGTGATGATCGGGGCATGAGAATAAAAGATGAAATTTCCGTTGACTTTATATGTCAGGTCTGTAAGAAAGGTTTCTCATCTGAAACCGCGCTTGAAAAACACAGTAAGTTACACAATCCCGTTAACATGGAAGTAATTAAACGATTTGTACAGGTCTGTGATCATTGTAAGAATGTATTTAAAACTACTTCAGCGTTTCGGGATCATCTACAGTATTGTAAACATTCAACAAATgccggtggtggtggtggtgtgaATGATTcttatttaaatgataaatacAAAAAGATCGGTGCCCGTATTCAGTGTGATAAATGCTTTACAACATTTGCCACAAAGATGTCATTAGGGAAACATAAGAAGATGAATAGGTGTCCATTATATCGGAAGACTAATGAAATGGTACAATTTGGTGCCACCAGACTTTATCATTGTAAGTATTGCAGGAAACGTTGTACAAATCTCCTTGGTTTGTCAAGACATTTAAAAGGATGCAGTGTTATGCAAATGAAACGAAGAGCTGCTGGAGTCGATGCGAACCATTGTATTAAATGTAGAAAACAGTTTTCATCTTTAAGCGTtttatttaatcatgagaaaTATTGTACAGCACAAAATGATCATGTTGGTCAGCCATTAAGCCAAAATCAAGGTGATGCTGAACAATTTGTTTCAGTGACATCTGTCGAAGGAACTGGAGGAACAAAGTGTCTTAATTGCAATTCTGAATGGGGCAGTGCAGAAAGTTTAGCGCGTCATCaaaaattctgtaaaacttttggtgGGATCGCTACTGAAGAGAATGTAGCGACCGGTGAACGATATTTTAGTGCTTGCAACAACTGCAATAAAAAATTCACCACAGAATTGAGttataaattacataagaaaTTTTGTAGTAGCGGTACTACAATCAGTAGTGCTCCTGGAACTGGTGCAGCTCGGTGTAAAGGTTGTGCAAGGGTATTTGTAACGAGGGATAGATTACGAGTGCATGAGAAAATGTGTAAACTTTCTAACCGTCAGTCATCTGTTGTGATCATACCGAAGCCACAAGAAGTCCACCAATGTTTATGTGGCAGCGTATTTTCAAGTTCAGGCCAGTTGGATTTGCATAAAGAAACTTGTCAACATCTACAATCAACAGGATCAAGTTTAATCGTTTCATCCTCGACAAAAACTAATTCAACTCCAGCTAAGATATTGTCGTGTGAGTattgtttcaaaaaatttactaaatatcaAGCTAAAAACAGTCACATGAGAGTTTGTCAAGTTAAATTGCGAGTTAATCCGAAACGGAAGAAATATTCATATCAGTCGTCAGCGCCACCTGCTACCATATCTGTCCCACCTCCATCTACAATGCCATTTTCATGCTTAATTTGTAAAGGAACTTTTGATACAGAATTAGAATTAATAGACCATAGTTGTCATGAATACGCGATGGCAAATGATATGGAAGTTAATAATATTACTGTTGAACCTGATATTCCTCAAGAGATTTTGGATATGCAATCAAGTACCCAGCAGTACCATCATCAGCAATTCACTCCGCGTGGTTTGTTAAAACCCCagaaaagaatatttaaatgcttgccttgtaataaaatattttctggtTCATCAGCATTGAATAAGCATTCACAATTATTTCATGGCCAGAGTCGTCTCACTTCAAATGCACTTATAAATCGAGATGGTACCGTTCAATGTCCAAGGTGTCCGAGAAGTTTCAGGGATCACAAAAGTCTTACTCATCATATGGGATGGCACACTCGGCAAAGCGGTTTACCGACAACATCGTCAATGCCTGATGAAACAGGACCTCCGACACCATCATCTTCGAGTAGTAGTTCATTTTTGTCACCTGAAGTTATTATAACTACAACATCATCTTCAGATAATTCATCACAGTTTAGTTGTTCTATATGTTTCCGTAAATTTTTAGGCAAAGGACCTTTACAAAATCATATGCGAACACACAGTAACATTTTGAGTGGCAACGCGAACCCTGCAGTCGATTCATCCGATATTAATGAAGATATAACTCCGAATGTTAAAAGGGCAAGGGGTGGAAATGCTTATAGATGTAAGATATGTCCGAAGGTTTTCCGCGATAAATTATCGTTAATCAACCATCATAATTTACATAAGACTGTAAGTCCGGCAAACAGTTTAAAAGCGAAACTGTTGAGTCGTGCCGGTAAAACTTATGTATCGTGCAATATATGTCATAAGATTTTATCGTCTAATTCGATAccgaaacataataaattacataagttAAGGCAAGATAAAATGCCGACAAGTTTCCCACCGGTTTCTTTAACACCAATATTTCAATCAGCAAAACAAAACAAACCGAGTGCTCCACCGGCTGCATTATTCCCGTGCGGTTTTTGTTACAAATTATTCCATCATCAACGTTCGCTAACCGAACACATAATCATGGCGCATAGTAATAATAAAACCAATCTAACTTCGGTGTCAGATAAGCACCAGGAGAAGTACGAGGATGATGATGACGATGTGTATATcgtcgatgatgatgatgatgataataatgataataacgaacaatataatatGACCATCGAACCCGATCAGCCTATCGATCTACAAGATGATGAAGATAACGCAGACGATGCAGCTGATGACGATGAACAAGACGGccaagataatgtgtacaaatgCGAGATCTGCGATAAATCATGGAAACATAGAAGTATGTATTTAAGACATGTCAATGCACAGTCTCACAAAGAATTAACGAAAAGACTGTCGGATATATTAACGCGTGTGAATCATGACATTAACATTAGTTAA
Protein Sequence: MSCDIDIYNVNELCRLCLSGDGTILPIFGLEHSSIDCIPLSYKIKACVSVEINKNDILPKKICVSCVHQVDSWHKFKSVCDTSQSKLQSWYKSQFPDADENSRSSQPVQGEVKQEYEDNIDDDDVVCCNDVPGASLHSTLIAPLPVDVILVEDDDDADDNCNGDFHHDEDDSEKENDMEVEDGFGNEKSGDKTRNSGEVIGNKSSSSKKSPITNGDFDSVGSSKNKQVESTNKNLVNGIERNKNNNSFDDSWFDGDELMLADFRNEVAPDVELSQEDVDKVKEKEIIVENECVNNDCTDKEATPSPSGDGDVSIKLLKDKSSNIIDRISSEINRRLSSDDNPDSITANCTIANGRNASESDDRGDVDSISNNDVDDIVEEDDEIDEQTVVEKRELRPRTNRNYRTDSLSSSPTLPDPGLVIVEGFSLSDYNSEANNDIHNLHHRFVRQPGPDLEMLDNVNSNHSSMMEVFHVKQEPLSPPSLLNSTVDAPVGLDPLDLNAGSTTPGTNTSTTTTTIKKEVDDWTLMTPEPIDIKPDISLLNTIGMIDNNIETPGKRRKYPQFKNGIPCEPCKSAFPNYVKWLRHTKSHKHQRNVALFDINRRPFAPGVIDPVQMLQQQSNYLPPRPPRQPIDCRLSPCPIGGCQAMFKHRRNLVTHVRTHHGYRLKDLEAKAALSKQLSSEKQSVTTSNNNADQVGGNDGANDDEDDGGNNDNGEKNIFKCSHCPKTFDLRISLKSHLLIKHRIASISAKLQCERCFKKFHRKTGLLSHLRSCGKYMKSRKCPYCLIVLPTYKETVYHKSRCTKRFTPSSNVQSINNSSGGGGGDGTVGNSNFSMVPNEDGTYSCEFCNITFEIQSVFYNHMELYHAGHLESLQKNDAGGDGEENKESSEKDPDSSIGLTTSEQQQQLSADQDADGRFACRYCVKTFADVEELQDHISYHDINKIFQCKLCFVTLNCKRYFQDHMRSHFIQHRGQYLCWTCFKPFDNRRDLTAHKTLHIQLKIYSCNVCDLSFNSILTLERHKKTHSQTTPDKSTENDNVEDTNDVDKQNTIETSSDDRGMRIKDEISVDFICQVCKKGFSSETALEKHSKLHNPVNMEVIKRFVQVCDHCKNVFKTTSAFRDHLQYCKHSTNAGGGGGVNDSYLNDKYKKIGARIQCDKCFTTFATKMSLGKHKKMNRCPLYRKTNEMVQFGATRLYHCKYCRKRCTNLLGLSRHLKGCSVMQMKRRAAGVDANHCIKCRKQFSSLSVLFNHEKYCTAQNDHVGQPLSQNQGDAEQFVSVTSVEGTGGTKCLNCNSEWGSAESLARHQKFCKTFGGIATEENVATGERYFSACNNCNKKFTTELSYKLHKKFCSSGTTISSAPGTGAARCKGCARVFVTRDRLRVHEKMCKLSNRQSSVVIIPKPQEVHQCLCGSVFSSSGQLDLHKETCQHLQSTGSSLIVSSSTKTNSTPAKILSCEYCFKKFTKYQAKNSHMRVCQVKLRVNPKRKKYSYQSSAPPATISVPPPSTMPFSCLICKGTFDTELELIDHSCHEYAMANDMEVNNITVEPDIPQEILDMQSSTQQYHHQQFTPRGLLKPQKRIFKCLPCNKIFSGSSALNKHSQLFHGQSRLTSNALINRDGTVQCPRCPRSFRDHKSLTHHMGWHTRQSGLPTTSSMPDETGPPTPSSSSSSSFLSPEVIITTTSSSDNSSQFSCSICFRKFLGKGPLQNHMRTHSNILSGNANPAVDSSDINEDITPNVKRARGGNAYRCKICPKVFRDKLSLINHHNLHKTVSPANSLKAKLLSRAGKTYVSCNICHKILSSNSIPKHNKLHKLRQDKMPTSFPPVSLTPIFQSAKQNKPSAPPAALFPCGFCYKLFHHQRSLTEHIIMAHSNNKTNLTSVSDKHQEKYEDDDDDVYIVDDDDDDNNDNNEQYNMTIEPDQPIDLQDDEDNADDAADDDEQDGQDNVYKCEICDKSWKHRSMYLRHVNAQSHKELTKRLSDILTRVNHDINIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -