Basic Information

Insect: Catonia carolina
Gene Symbol: -
Assembly: GCA_035578175.1
Location: JAQMRL010000005.1:63428293-63490437[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00036 0.057 15.7 2.5 1 23 959 981 959 981 0.97

2 16 0.0014 0.23 13.8 5.5 1 21 1009 1029 1009 1031 0.93

3 16 5.3e-07 8.4e-05 24.6 2.9 1 23 1037 1059 1037 1059 0.98

4 16 8.2e-05 0.013 17.7 5.1 1 23 1065 1087 1065 1087 0.96

5 16 4.1e-06 0.00065 21.8 6.0 1 23 1093 1115 1093 1115 0.98

6 16 2.3e-07 3.6e-05 25.7 2.7 1 23 1121 1143 1121 1143 0.98

7 16 0.00071 0.11 14.7 6.3 1 23 1149 1171 1149 1171 0.97

8 16 3.9e-05 0.0062 18.7 7.0 1 23 1177 1199 1177 1199 0.98

9 16 8.6e-07 0.00014 23.9 2.7 1 23 1205 1227 1205 1227 0.98

10 16 5.2e-05 0.0083 18.3 7.4 1 23 1233 1255 1233 1255 0.98

11 16 2.1e-05 0.0033 19.6 7.5 1 23 1261 1283 1261 1283 0.98

12 16 4.2e-06 0.00067 21.7 3.7 1 23 1289 1311 1289 1311 0.98

13 16 7.5e-06 0.0012 20.9 2.5 1 23 1317 1339 1317 1339 0.98

14 16 0.00021 0.033 16.4 1.1 1 23 1345 1367 1345 1367 0.98

15 16 1.7 2.6e+02 4.1 6.1 1 23 1377 1399 1377 1399 0.98

16 16 7.8e-05 0.012 17.7 0.6 3 23 1406 1427 1405 1427 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00036	0.057	15.7	2.5	1	23	959	981	959	981	0.97
2	16	0.0014	0.23	13.8	5.5	1	21	1009	1029	1009	1031	0.93
3	16	5.3e-07	8.4e-05	24.6	2.9	1	23	1037	1059	1037	1059	0.98
4	16	8.2e-05	0.013	17.7	5.1	1	23	1065	1087	1065	1087	0.96
5	16	4.1e-06	0.00065	21.8	6.0	1	23	1093	1115	1093	1115	0.98
6	16	2.3e-07	3.6e-05	25.7	2.7	1	23	1121	1143	1121	1143	0.98
7	16	0.00071	0.11	14.7	6.3	1	23	1149	1171	1149	1171	0.97
8	16	3.9e-05	0.0062	18.7	7.0	1	23	1177	1199	1177	1199	0.98
9	16	8.6e-07	0.00014	23.9	2.7	1	23	1205	1227	1205	1227	0.98
10	16	5.2e-05	0.0083	18.3	7.4	1	23	1233	1255	1233	1255	0.98
11	16	2.1e-05	0.0033	19.6	7.5	1	23	1261	1283	1261	1283	0.98
12	16	4.2e-06	0.00067	21.7	3.7	1	23	1289	1311	1289	1311	0.98
13	16	7.5e-06	0.0012	20.9	2.5	1	23	1317	1339	1317	1339	0.98
14	16	0.00021	0.033	16.4	1.1	1	23	1345	1367	1345	1367	0.98
15	16	1.7	2.6e+02	4.1	6.1	1	23	1377	1399	1377	1399	0.98
16	16	7.8e-05	0.012	17.7	0.6	3	23	1406	1427	1405	1427	0.97

Sequence Information

Coding Sequence: ATGACAGCAGTAACTGGAAGCAGTACAACACATACTGGATTTGCTGGTAGTCTTATCAATTCCGTAAACCTCATAAATACTATGGATACTGAAGATTGGCAACGTGAATTAGACAACGTACGTGTTACTCTCTTAAATTTAAGATCACCACAACAAAAGGACAGTAAAACTACAGAAGAAAGTAACAAATTCGAAAAATACAGCATAGTTCCAGACGAACTACTCCAGAAAGTAATGGGAGGCGGCAAAAAAAATAAAGCAGAGAAACAACCAAAAGGAAAAGGAAAACAAAAACCTGAGCCTCCTGTAGAACCACTTGAGAAACCAGtaCCTGAAGAACTTCCTAAAGTTTCATCAAAAACTGatcatgtaattaaaaatttccaaaatgatcCTTTAAACGGAAGATATTTGGTGACTAATATAACTGACAAgTGTTGGGATTTCAAAAGAAGAATTGCAGAAAGTGTACTTGTTGGTCATACAAAAACTATATCTGCAATTGCAGTTAACACTAAGTATATAGCTTCGTCATCTTACAGTAAAACTGTCAgagtaTTTAGTATTACGAATGGCACTGTGTTCTGGTTGTTTGAAGACCAGACGGCTGTCGTATCTTCTTTATTGTTGAAAGAAGATAATCATATGTTCGCTGGTTTCAGTAATGGTGCCATAAAATGGTACAATTTGAATAAAAAGAGTTTAATCGCCGAATTTGAACACATTCATAAAGAAGAAGTAAAAGTATTATTGATTCCAATAATACATCCAAACACTTTAATTTCAGCTGGAGCTGATGGTTTTATATACTGTTTCAGAACTGACCATCCATCAGAAACACCATTTTCTAAATGTTCACATGGgagTTGTGTAACAAGTGTTGTAGCCACAAAATTTGGGTATTTAATTTCTGGTTGTGAAGATGGTAGATTGAGAGTCTGGGATATAACCATTGGTTTATTACTAAAAGTAATAAGGCCGAGTGCTGATTTACGACCTATTCGTAATCTTCATTTACTTTCAAATGCTGAAGTACTTCAAATGGTTGTCAACATGGATTCTGGAGTATTAATTCATGAATACCAATGTAATTTGCCACCAGTATTACATAAAAAGTTTCAAAAGAATAAATGTGATGAAGGAGGAAGTTGCTTCAGTAAACAGACTGAACGATTTTCCCTGTCTTCATTTAACAATGAGCTATCATTTTACAGTGGTTTAAACACAAAACGATCAACTTCACACCGACTTCCTAAAATCAAGAAACAAGAGCTAAATTCACAAAGACATAAGATTCCTCCTATAAAATCATTATACTATTGTTGTGCTGgttCTCAAGTGAATGAAAAAGATGACGACGCAGATCAATTAAGAATCACTGATGTACAAAGATTATCGACTAAAGAACAGCGATTAAAAGCTCTCGCCAAACGTTGCTGTACTTTACCAAAAATTCGAAATAAAACTGATTTTGAATATATTGGTTCCAGCATGCTATTCTCCTCTTTGAAAAAGGTATGCTTATCGGTCCAAAGGGATGATGCTGCAATGCATGGTGCCACAATGGCGTTATCCAGTGTCGCCAAATATTGGGTACTCACCAATTTATTTCCAGGACCCGTTCCTCAGGTGTCAGTGTATGGCTTACACACACCACGACTGGATGCGACAAAAGATACAGCTCACACGCCTGGATTAACATCCATCAATATCGGCGGCGAGACTGTAACTTTAGTTCAGCATCAGTCGCAGTTGCCAACTGTTGGAGGTATACCTGTCAGCAGTGTCAATGGTGGAATCGCAACAATCGCATTGCCATCTTTAACACCAGCTCCTCATATTGTTGCGATACCGCCTCCATTACCAGCTAATAAAGAAAGCGAGTCTAGTAAATCACTACTATCCGATCAGTGTGCTGCCAATCAAGTGCATTGTCAGGTACAATGCGATATGTCTTTAGTATCGCAAGGACAGTCGTCACAAATACAAACTGTGACAACTCCATCATCAAACACTACTTCTTCATCATCAATATCAAGCACATTACCATTAGTGCATTCGCATAATCACGCGCACTCGCATATTCCTCAGTCATTACCGCTCACATCACAACAAGCCCACTCTAACAACACGATCACAACTTCTACTGTTTCAAGCATCGCTGCTGCGGCCGCAACTGCAGCTGCTGTGTCTGCTGCTACTGGGTTACCAATATCTTTTACGCCACAACAGCGACATCAGCTTCATGAACAGatGTTCCATCACCAGGCACTAGCTCAACAACCGCAGGCACTTCATTCTCAAGAAAATGTACAGGCCAGAACGACCACCAACAATGAATTAGAAAACATGCAATTATCATTAGTTGTCGATAGTAATAAtgcgaataataataatactaataatgcaaacaataacaataataacagtaGTAACAGTAATAGTAATTTGGATATCAAACAAGaacaaaaaattgacataaaagaCAACCGACCAATCGTAACAATCCCagcATACCCTCCTCAAGATTTGAAACCGACGCAAGTATTACCGATGCAACAAGTTGATTTGCGAGCAGCTGTTGACGCATCCATGTTAAAAGTAAATGGTGAAAATGATCATACGAAAGCACTTGCCGCTGCTCTGGATCCGCAAAACATGTACAAAGTCAATGTCGACGATTTGAACCAGTTGCTGGCATATCATGAAGTATTCGGTAAACTTCAAACCGTCGGAATGGGTATAGCAAATACAGCAGTTACCGGAGCAGGAGCCACTTTACCCCAAGTCACTGCAACCGGTATCGTTGCGAAATTAGCCTCTGAAGAAAGTAACTCGTCTCATTCCAATTCTCCATCACCTCCGCATAATACACATGTGTGTGATCTGTGCGGCAAAAGCTTTCAGTACCGTTATCAGATGATTGTACATCGTCGTTATCACAACGAAAAGAAAAATCTTGCATGTTcgGTTTTTGCTAATGAACTTGGCGGTGAAATAGGTAAACCACAACCAAATAAACCGCATGCTTGTACAATTTGTACAAAATCATTTGGACGCAAAGAACATTTAGAAAATCATTTACGTTGTCATTCAGGAGAAACACCATACAAATGTCAGTATTGTGGTAAGAGTTTTACTAGAAAAGAACATCTGGTTAATCATGTTACAGTTCATACTGGAGATACCCCACATCGGTGTGATATTTGTAAGAAATCATTCACGCGTAAAGAACATTTTATGAATCATGTTCTATGGCATACAGGAGAAACACCGCATACCTGTACGATATGCGGTAAGAAATACACTAGGAAAGAACATCTGACAAGTCACTTACGATCACATACAAACGATACACCATTCAGATGTGAAATATGCGGGAAATCATTTACAAGAAAAGAACATTTTACGAATCATATCATGTGGCACACCGGCGAGACACCGCATCGTTGCgatttttgtttgaaaacgttcaCCAGGAAAGAACATCTATTAAATCACGTAAGGCAACACACAAACGAATCTCCACATCGGTGTACGTATTGTACAAAGACATTCACTCGCAAAGAACATCTGGTTAATCATGTCAGGCAACATACTGGGGAAACACCTTTTCAGTGCCAATATTGCCCAAAAGCATTTACGAGAAAAGATCATTTAGTCAATCACGTTCGTCAACATACTGGCGAATCACCACATAAATGTATGTACTGCTCAAAAAGTTTCACGAGGAAAGAGCACCTAACAAATCATGTCCGACAACACACCGGAGAATCTCCTCACCGTTGTACATTTTGCACGAAAAGTTTTACACGGAAAGAACACCTAACGAATCATCTGCGTATTCACACCGGAGAATCACCATATCGCTGTGAGTTTTGTCAGAAAACATTCACGAGGAAGGAGCAGTTAAATAATCACCTGAAGCAACATGCTTTAGAAACCGATTACAATTGTCATGTATGTTCGAAACCGTTCATGAAAAAGGAAAATCTGATAAATCACATGCGTAGTCATACTGGAGAACGTCCGTTCAGTTGTAACGAGTGCGGTAAATCGTTCCAGTTGAAAGGTAACCTTATTTTTCATCAACGATCGCACACGAAAAATGAACCACAAGAACGGCCGTTCCATTGTGATGTGTGTCTAAAGGATTTCATTTGCAAAGGTCATCTAGTATCGCACAGACGTAGCCATAATAATCAGCACAAAATCTGTCCGCATTGTGATAAAGTATTTAATGATCGCGCCGGCGTtctaaaacatattaaaaaatatcatccCGATCAAATTACATCACCCAATCCTCCGGTCACCATCCCTCCTCCTGTATCTGCCCCGTCTTTACCAGCACCTCCTCCTCCTTTGCATCCCGCAATTATTACACAAGTACCGACACAACCGAACATTTTAACgtcgttttaa
Protein Sequence: MTAVTGSSTTHTGFAGSLINSVNLINTMDTEDWQRELDNVRVTLLNLRSPQQKDSKTTEESNKFEKYSIVPDELLQKVMGGGKKNKAEKQPKGKGKQKPEPPVEPLEKPVPEELPKVSSKTDHVIKNFQNDPLNGRYLVTNITDKCWDFKRRIAESVLVGHTKTISAIAVNTKYIASSSYSKTVRVFSITNGTVFWLFEDQTAVVSSLLLKEDNHMFAGFSNGAIKWYNLNKKSLIAEFEHIHKEEVKVLLIPIIHPNTLISAGADGFIYCFRTDHPSETPFSKCSHGSCVTSVVATKFGYLISGCEDGRLRVWDITIGLLLKVIRPSADLRPIRNLHLLSNAEVLQMVVNMDSGVLIHEYQCNLPPVLHKKFQKNKCDEGGSCFSKQTERFSLSSFNNELSFYSGLNTKRSTSHRLPKIKKQELNSQRHKIPPIKSLYYCCAGSQVNEKDDDADQLRITDVQRLSTKEQRLKALAKRCCTLPKIRNKTDFEYIGSSMLFSSLKKVCLSVQRDDAAMHGATMALSSVAKYWVLTNLFPGPVPQVSVYGLHTPRLDATKDTAHTPGLTSINIGGETVTLVQHQSQLPTVGGIPVSSVNGGIATIALPSLTPAPHIVAIPPPLPANKESESSKSLLSDQCAANQVHCQVQCDMSLVSQGQSSQIQTVTTPSSNTTSSSSISSTLPLVHSHNHAHSHIPQSLPLTSQQAHSNNTITTSTVSSIAAAAATAAAVSAATGLPISFTPQQRHQLHEQMFHHQALAQQPQALHSQENVQARTTTNNELENMQLSLVVDSNNANNNNTNNANNNNNNSSNSNSNLDIKQEQKIDIKDNRPIVTIPAYPPQDLKPTQVLPMQQVDLRAAVDASMLKVNGENDHTKALAAALDPQNMYKVNVDDLNQLLAYHEVFGKLQTVGMGIANTAVTGAGATLPQVTATGIVAKLASEESNSSHSNSPSPPHNTHVCDLCGKSFQYRYQMIVHRRYHNEKKNLACSVFANELGGEIGKPQPNKPHACTICTKSFGRKEHLENHLRCHSGETPYKCQYCGKSFTRKEHLVNHVTVHTGDTPHRCDICKKSFTRKEHFMNHVLWHTGETPHTCTICGKKYTRKEHLTSHLRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCLKTFTRKEHLLNHVRQHTNESPHRCTYCTKTFTRKEHLVNHVRQHTGETPFQCQYCPKAFTRKDHLVNHVRQHTGESPHKCMYCSKSFTRKEHLTNHVRQHTGESPHRCTFCTKSFTRKEHLTNHLRIHTGESPYRCEFCQKTFTRKEQLNNHLKQHALETDYNCHVCSKPFMKKENLINHMRSHTGERPFSCNECGKSFQLKGNLIFHQRSHTKNEPQERPFHCDVCLKDFICKGHLVSHRRSHNNQHKICPHCDKVFNDRAGVLKHIKKYHPDQITSPNPPVTIPPPVSAPSLPAPPPPLHPAIITQVPTQPNILTSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -