Basic Information

Gene Symbol
gl
Assembly
GCA_035578175.1
Location
JAQMRL010000001.1:30004231-30030680[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 4.5e-06 0.0086 17.9 0.1 17 41 295 316 287 318 0.89
2 5 0.28 5.3e+02 2.5 0.1 18 41 324 344 319 346 0.82
3 5 0.012 22 6.9 1.0 6 38 341 373 336 373 0.80
4 5 0.00026 0.48 12.2 0.7 18 40 380 399 376 402 0.89
5 5 0.6 1.1e+03 1.5 1.2 18 40 408 427 400 429 0.82

Sequence Information

Coding Sequence
ATGTTATGGACTGGTATACGAGAGAGGTTCGGTGGCGGGGACAGTCTCAAAGACATCCTGATGGAGGGGTGGGGCACGGTGGCAGGAGGCTGCGGCCTGGAGCCCTGCCAGTCAATCTGGCCAGGCCCGGACGATATGGGGTCGTTCTCGCTTCTGGACCTCGACCCGCTATCCACACTCTTCCCCACCACATACAAgACGGAGCTGGGACTTTTGGATTGTAAACAACAGCCGAATGACATGGCCGACGTACTTCTTAGTCTAAAACATGCTGTCGTTCATCCTGGTCAAACAGGTCAACTGTCACCCCCTGGTTATGGGGCGTCTTATACGACGATGGGGACTCAACCCCCACCGTGCAGTCAGCAGGCGTCTCTTTCATATACTGTTCATCCTCATCAGATGGCGGTATCCATGTCACCGGGAAGCAATGGCGGTTATGGTAACGGCCAATATGTCTGTCCGGATGTGACTGGACCAGTTGCTGCGCCACCGCAGATGACCACCAGTAGCTACCAGTTTCCTAGTATGTCAGTGAATGTGAGCATGAACATGACCATGCATGGATACCCACCCTGTTCTGTGCCTCCTATGCATGAACAAATACCACAGGTGCAATGGACACCAGCTGCAAATCCATCCCCGGTTTACCAAAGTCCACAGTACGCCGGAGCAACATATTCGTTTACGACAGATTTCAGGCCTCCGCCAGCCCCACCTCCAGAACCGTCTTACATATCTTCATTCAAACCGCTGCCCAAACAACAACTTCAGTCACAGCAACAACAGTCGCAACAACATCCCCAACCGCATCAAAGTCCCAGCTGTAATCTCCGACCGAAACGGATAAAACTCGTGCCTGAAACTGACTCAAGCCGACCTAACCAATGCCGCATCTGTGGGAAAACGTACGCCAGACCCAGCACATTAAAAACACATTTAAGAACGCACTCTGGTGAAAAACCATACCGCTGTGATGATTGTAATAAATCATTCAGTCAGGCAGCAAATCTCACTGCACATGTCAGgaCTCATTCCGGAGAAAAGCCATTTCGTTGCCCAATTTGTGCCCGTCGGTTTTCTCAATCCTCATCAGTGACAACACATATGCGAACGCATTCTGGAGAACGACCTTATAGATGCAGATTGTGTAAAAAAGCATTTTCCGATTCATCAACGTTAACAAAGCATTTACGAATACATTCCGGTGAAAAACCATACCAATGTAAACTGTGTCTTTTAAGATTTTCTCAATCGGGAAATTTGAATAGGCATATGCGGGTCCATGGTGCTGCTGCGGCAGCGGCAAATTTAACTTTATTGCCGGCATGA
Protein Sequence
MLWTGIRERFGGGDSLKDILMEGWGTVAGGCGLEPCQSIWPGPDDMGSFSLLDLDPLSTLFPTTYKTELGLLDCKQQPNDMADVLLSLKHAVVHPGQTGQLSPPGYGASYTTMGTQPPPCSQQASLSYTVHPHQMAVSMSPGSNGGYGNGQYVCPDVTGPVAAPPQMTTSSYQFPSMSVNVSMNMTMHGYPPCSVPPMHEQIPQVQWTPAANPSPVYQSPQYAGATYSFTTDFRPPPAPPPEPSYISSFKPLPKQQLQSQQQQSQQHPQPHQSPSCNLRPKRIKLVPETDSSRPNQCRICGKTYARPSTLKTHLRTHSGEKPYRCDDCNKSFSQAANLTAHVRTHSGEKPFRCPICARRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVHGAAAAAANLTLLPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00283909;
90% Identity
iTF_00283909;
80% Identity
iTF_00283909;