Ccar028142.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Catonia carolina
Gene Symbol
-
Assembly
GCA_035578175.1
Location
JAQMRL010000003.1:63150387-63160652[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 6.6e-11 1.2e-07 33.3 3.8 1 44 170 211 170 211 0.97
2 15 1.7 3.3e+03 -0.0 0.2 6 25 281 298 280 300 0.78
3 15 5.5 1e+04 -1.6 0.6 15 43 385 413 379 414 0.83
4 15 1.6e-07 0.00029 22.5 0.2 1 44 462 503 462 503 0.95
5 15 4.2e-09 7.9e-06 27.6 2.2 2 43 685 725 684 726 0.96
6 15 4e-10 7.5e-07 30.8 2.8 4 44 782 821 780 821 0.96
7 15 7.9e-12 1.5e-08 36.3 4.1 2 44 867 906 866 906 0.96
8 15 3e-06 0.0057 18.4 8.6 10 43 954 986 950 987 0.90
9 15 0.0012 2.2 10.1 3.9 1 32 1039 1068 1039 1071 0.89
10 15 0.0013 2.4 10.0 3.9 6 44 1367 1406 1363 1406 0.91
11 15 4.6e-10 8.7e-07 30.6 0.1 1 43 1432 1473 1432 1474 0.97
12 15 1e-12 1.9e-09 39.1 3.5 1 44 1513 1555 1513 1555 0.97
13 15 2.4e-14 4.4e-11 44.4 1.7 1 43 1621 1662 1621 1663 0.97
14 15 2.2e-11 4.1e-08 34.9 2.8 1 44 1720 1762 1720 1762 0.98
15 15 5.9e-12 1.1e-08 36.7 0.1 3 43 1828 1867 1826 1868 0.95

Sequence Information

Coding Sequence
ATGGATTCTTATGTTTTTAATTCGGATTCAACTAGTTCgtttattataaaagaaattacagATAATATTGATGACTTGAACAGTGTGATCTCAACGGCCAATGAAGATGATAATCAAAACGATGGAATATCTGATATATTTATTGTCTCAATGAATGAACCTGATGTGAACAATATTAGACATGAAAAATTTGTGTCCGAGAAAAATGTAAATGTGAATAATGATATAATTCATattgtaaacaataaacaatacgATCAATCATCTGTGGATGAATTTGTAATCGTCAAACCTGATGATCCTGTCAAAGAATTGACAAACACTTTACAAAATGACAATACGGTTGATAGTTCTCTTGCATTACCAGGCTCGGTTATTGACATTAAAGATGGATCTAATTCGATTGGTACTGAGAATACagaaaaatatgaattaatgGAGGAATTTTTGTGCTTTAAAAATAAAGACAGTGGAAATGATAAACATAAATATGTTAGTAAAACTAGAAGTATGGTATGGAAATATTTTACAAAGGAATCTGTAAAGAAAGTTAAGTGTAGTATTTGTTTCAATGAAATTTCGTACTGTAAGAGCACTTCACCATTATTACGTCATTTGCGAAATAAACATAAAGATCTAGTTGGAGACGATTGTTTAACTATGGATGAAGAACAGTTGGCTAAGTTACGCAGTTCATTTAATGATTTATTCAAGGAAGTAAATAGCAACAGTGATGAGACAGGTATTGACACTTTGGATGAAGAAGCAGAATTAATAATCGGTGATTATAGTGAAGATGACAGAACATACAAGAATGAAGTTAATAAGTTGGAAGGAATGTATTTTATTACAGATAGTAAAGGTCATAAAATTTGTAATCTATGTTCTAAAATAGTACCTCCTGAACGTTACACTTATTATTCTCTGTGCCATTTAAAATTTGATCATGATGTCGCTATTAGTTCTGATTTACAAGAACGTTATCCAAGCCTAGATAAAAATACTACAACAGTTGATGAAtgtaaagaaaacagaaaattagaaACGAGTGAGTCATGGAAAAGTAAAAACCAGGAGGAATTAAATGATATTAGTAATTCTGATAACGATGAAATTGAAAAACTTAAATGTATATACTTCAATAATGTTGGATCGAAATTAATGTGCAAATTGTGTTTTAGAGTATCTCCTACTACAGataattctaatgttttgttatgcCATTTAAAATATGAACATGGAGTTAAAGTAACTTCAATAGAAGAAGATTCATGTGATAATCCAATTCATGATTTTAATGGTATACCGAATGAAACGGACAGAAATGAAGTCGAAGATCGTTCTCAAATATCGGATAGAATAGACAGTGATTTAGAAACGAATAGCAAAGTTTGGGATTATTTTACTAAACAGCCAACTGGTAAAGTAATATGCAGTATCTGTTCTAGAATTTCCCCGTTTCCGAAAAGCACTTATAATTTAGTAGGTCATTTAAAATACACTCATAATATCATTATAGATTTTAACGAAGAACAATCGCAGATCAATAACAAAGAAGATTCTCTTGAAAATTGCTATACTTcagaatttgttattaaaactGAAAATGTTTCCGAAAATAGTCTTAATGAAGATGATTGTAGTTCTTCGGAAAGTGAATCCACTTCTTCGGAAAGTTCACAAGAAGCTGATTCCGATTCTTCCGCCGAAATGATGAAAACTGTACGAACTTGGAGATATTTCACTAAATTCGaaggTATTAATAATTTAGAATGTACTGTGAAATTACATATGCAAATACATCATGCTAAATGGGAAGTGATATGTTGCGATGATGATATTGTGAGGTATCAAAACAGTAAATCAATGTCGTTTGAAGAGTATGACGAATTAGGTGAAATTGAAAATGAAGTAAATCTTTTAAGTAGCAATTTATCTGAAATGGATGAGATTGTTACTCCAGATAAATTAGAAAAAACCGTTAACGAGATTATTGAATCAGATATGAAATCCAATGATAATGATAgcaatgaagaagaagaaggagagaaTAAAATCTGGAATTATTtcattaagttaaataattttttggcaAGTTGTAATTTTTGCGATAAATCATTGAAATATTCTAATAAGAGAAATGATAATTTACTAAAACATCTTCGTTCtgtacatttttgtgtttatcaAAGTTATTATGGTATTCTACCGAGTGGCTATGAAAGTTCAATAGATGGTAATAGTAAAGAAAATGTTATAGATGAAAATATTGATTGTTGTGATTCTAGACTTCTGACAGGTGAATCGGCAGGCACACCATCACTTCGAAGAATTGGTAGAACATGGTCACATTTTACCAAAACAGATATGGGTAAAGCAAGTtgtaatatatgtaataaaattatactgtatTCTGGGACAggtacaaatattttaaactatcATCTCAGTAAAAAACATTCAGATTATTTTTGTGATTCTTCCAATGAAGAACCACCTGCACTTCAAAATAATATCACTGAAGACAATTTGAGCGATCAAGATAATGGTTTAGAATACAAAGATTCCAATAATCTTtcaaaatacaaaagtaaaaataaagtttggAAGTACTACACAAAATTAAACGAAAATTTTGCTAAATGTCAATTATGTATGACAAATATTTCTTGTAGAggaaatagtaatttaataaGACATTTACAGAGAATACATTCTGTACTTTCACTTCCCAATCCAGTATTGGAAGACAATGAGCTGACTGATGAACCTGAAAAATCACAACTATTAGCTGGACTTCATCTGGCTCCAAAAAAAACTGCgattcaagaaaataaaaaacgtgTTTGTTTCACTGAACTGGGAAAGAATATTGTAAAgtgtaatttttgttcaaaaattatatCGCATAAAAATGGCAACATACATAAATTGACTAGTCATTTACAAAACAAGCACTGTAATGAAATTATACGGTACAATagtcagttattaaaaaatataaatgttgatGGTGAAGAACCTGGAATTTCAACTCTTGATGATCATCCATTGATGGATCCGTTAACTTCAACGGAAAGTGAGTACAATGTTATTCCAGACTCAAAGAAAAGAAGTGAAACTTGGTTgtattacacaaaattaaataatcattATGCAAAGTGTAATATTTGCAACAACGCTTTATCATATTGTAATCATACATTAAACCAATGGTTAAGTGGAAAAGATCAAACTGAACAAATTACTGTCGAAGCAGATGCTCAAATATTAAATGAGAAcagtgaaaataatattattattattactacggATAACGATGAAATATCAAATGAAGATATTACGTACCATATTCTAAATTCTGATAATGAAATCGATGATGATGTAAAAGTTATCATCTATAAATATAATTCTGGTGAACATGAcaataatcaaattaaaattgaAGAGGAGTCTTTAGAGAATGCTTCAAATGATCAACAATCTAATAAAGCACTTGCAGATCACATCAAAGCTATTCTTGATCAGATCAATAATTCAGCTGATCTTATCGGTAATCGAGAACCGAATAAGGAAATCAATAATACGGATGAGTCAAGAAACCATTCTGTTGATAAATTATCTGTAACAATAGAAAACTCTGTTTCTGATTCATCAGCTTCATTTGCGTTACCATCGATGCCGGAATTACAAGAAAGAAAGATTAAAAATGCTTCTTTTGATAATGGTAACGCTCGATCTGATGGTCATTCAGGTATCGTAAATGAAGgtttagaaaaaatagaaaatgagaataaggtaaatttaaataatattacttctgGTGATAATATAATGAGTGAAAAACTCGTGAAATTTGAACGTTCAACTGTTACTGAAAGTAATCACACAAATTCAACAGCATGTGTTAATGAATGtactaataataaagaaaataccGCCAATATTTCTGATCTGGAAATTATAAATATGGAAGAAACACCCGATAAAGATAAACCAGTTCaaaatgttgaatttttaaatgataaatttgaAATACCAGCTggagtttatttacaaaaattaataaaactgcataaaactaataaaaatctaaTTCACTTTTCGAATATAAATTATGAATATCGTATGGCTAAATGTAATATCTGTAAGACTTATGTTTCATTTAATTGTCCGGTGATATATAACCTTTTATCGCATTTGTATactaaacataaaaatgttatcTGTGATGATAAAGTTAAAAAgagaaacaatgaaaaaatttgtaatgaaataaaagtacGTAAGAAAAGTCCTgtttggaaatattttattaatgatgttGATTCTAGAGCTATTTGTAAAATTTGTCGTTTACATTTCTCTTATAAAGGCGGTGCTATAAATAATTTAGGAAGACATTTACGATTAAGGCATGATATTGTGGTTTCGACAAAAAATGATGACAGCATTAATCTAGATGATCTAGAGGATGTTAGTATGGAAACTTGTTACCCAATAATACCCAGAAAACGTCCTGCTGTAAAATTAAGGAGTAAAACGTGGAAGTATTTTTCTAAAGAACCTAATGATTGGGCTAGATGTAATCTCtgcaaaaaatatttatcttatcGAAGTAGTACCATTAATAATCTAACAAGACATTTGCGTACAGTTCACTCGCCAATTTATGAATCTTTATTCAATTCAGATGAAAGTGAAATCAAAGTAGAGATTGCTGGAACAACAGATGATGCTGTTACCACACCTAACGATGACATCTTTAATCACTTATTGGTTGAATCAACAAAAAGTCGTGATGAAGTTTTACAGGCGTGTTCACATACTTCAGATCAAGTACCTAACTCGAAAAGAAAAAGTCTTGTTTGGAATTACTTTACAGAATTATCTCATGATAGTGGTAAATGTAATTTTTGCTCGAAAGTCATCTCTTGCAAAGGCGGAGGAACTAGCAATTTGTCTCGTCATTTAAGAGTTAAACATGGGGTCTGGATTGTCTCTACGAGTAATTTGAGGGAATCATTTCGTGACTTACAAGGCAGTAATAAGAATCAAAGTAATATTAATGTTAACATGGATACGGAAGTTTGTAATGAAACGTTTATAACTCAAGAACAATTGCATATCTTGAAAAGAAAATTCGTCAGTAGAAAAAGTAAAACATGGGATTATTTCATGAAAGTGAGTGCTGATAAAGTAATGTGCAATCTATGTTCAAAAATGCTTTCTTACAAATGTAAAGCTGTACACAATTTACGAAGGCATTTACAAATTAAACATCCAGAGTGCTGTAAAAAACCTGAAAATTTACGATTAAAATTACAGATCAGTTCTGTTAACGAGATTGAGCCGACAGAAGTAATAGAtccagaaaaaaattttattgatataacTGACACTAACGTTATTCTTGTTGATGATGAAAATCAGCCTCCACCTGCACGTTCGTGTCGTTCTGTAAGACCtaagaaaagttttgtttggAATTATTTTGAAGAAGTCGAATATGGTGTTGCAAAGTGCTACATGTGCTCAAGGGTTTTATCATTTAGAGGTGGtggaacaaataatttaacaaggcaTTTACGAATTAGACATGCAATACCTATTAATGATTTACAAAATGAACCAACTCAGATACCTGTTAGCGATGAAATGGCTGAAACAGCTCATTTGCTTGTTAATGATGAGGCTCAAACAATGCAGTTACCTATAGATGAAGAGGCTCAAGCTGTTGAGTACAATGTTGATGGAAAGACGGAAACGATACAGTTACCTTATACTGAAGAAGTAAAAGCAGCTGAATTACCTGTTATTGTACAACCAGTTCAAGTTATGGATAATATGTCAGTTATCgataataatactataaatgaTTCTCTATAA
Protein Sequence
MDSYVFNSDSTSSFIIKEITDNIDDLNSVISTANEDDNQNDGISDIFIVSMNEPDVNNIRHEKFVSEKNVNVNNDIIHIVNNKQYDQSSVDEFVIVKPDDPVKELTNTLQNDNTVDSSLALPGSVIDIKDGSNSIGTENTEKYELMEEFLCFKNKDSGNDKHKYVSKTRSMVWKYFTKESVKKVKCSICFNEISYCKSTSPLLRHLRNKHKDLVGDDCLTMDEEQLAKLRSSFNDLFKEVNSNSDETGIDTLDEEAELIIGDYSEDDRTYKNEVNKLEGMYFITDSKGHKICNLCSKIVPPERYTYYSLCHLKFDHDVAISSDLQERYPSLDKNTTTVDECKENRKLETSESWKSKNQEELNDISNSDNDEIEKLKCIYFNNVGSKLMCKLCFRVSPTTDNSNVLLCHLKYEHGVKVTSIEEDSCDNPIHDFNGIPNETDRNEVEDRSQISDRIDSDLETNSKVWDYFTKQPTGKVICSICSRISPFPKSTYNLVGHLKYTHNIIIDFNEEQSQINNKEDSLENCYTSEFVIKTENVSENSLNEDDCSSSESESTSSESSQEADSDSSAEMMKTVRTWRYFTKFEGINNLECTVKLHMQIHHAKWEVICCDDDIVRYQNSKSMSFEEYDELGEIENEVNLLSSNLSEMDEIVTPDKLEKTVNEIIESDMKSNDNDSNEEEEGENKIWNYFIKLNNFLASCNFCDKSLKYSNKRNDNLLKHLRSVHFCVYQSYYGILPSGYESSIDGNSKENVIDENIDCCDSRLLTGESAGTPSLRRIGRTWSHFTKTDMGKASCNICNKIILYSGTGTNILNYHLSKKHSDYFCDSSNEEPPALQNNITEDNLSDQDNGLEYKDSNNLSKYKSKNKVWKYYTKLNENFAKCQLCMTNISCRGNSNLIRHLQRIHSVLSLPNPVLEDNELTDEPEKSQLLAGLHLAPKKTAIQENKKRVCFTELGKNIVKCNFCSKIISHKNGNIHKLTSHLQNKHCNEIIRYNSQLLKNINVDGEEPGISTLDDHPLMDPLTSTESEYNVIPDSKKRSETWLYYTKLNNHYAKCNICNNALSYCNHTLNQWLSGKDQTEQITVEADAQILNENSENNIIIITTDNDEISNEDITYHILNSDNEIDDDVKVIIYKYNSGEHDNNQIKIEEESLENASNDQQSNKALADHIKAILDQINNSADLIGNREPNKEINNTDESRNHSVDKLSVTIENSVSDSSASFALPSMPELQERKIKNASFDNGNARSDGHSGIVNEGLEKIENENKVNLNNITSGDNIMSEKLVKFERSTVTESNHTNSTACVNECTNNKENTANISDLEIINMEETPDKDKPVQNVEFLNDKFEIPAGVYLQKLIKLHKTNKNLIHFSNINYEYRMAKCNICKTYVSFNCPVIYNLLSHLYTKHKNVICDDKVKKRNNEKICNEIKVRKKSPVWKYFINDVDSRAICKICRLHFSYKGGAINNLGRHLRLRHDIVVSTKNDDSINLDDLEDVSMETCYPIIPRKRPAVKLRSKTWKYFSKEPNDWARCNLCKKYLSYRSSTINNLTRHLRTVHSPIYESLFNSDESEIKVEIAGTTDDAVTTPNDDIFNHLLVESTKSRDEVLQACSHTSDQVPNSKRKSLVWNYFTELSHDSGKCNFCSKVISCKGGGTSNLSRHLRVKHGVWIVSTSNLRESFRDLQGSNKNQSNINVNMDTEVCNETFITQEQLHILKRKFVSRKSKTWDYFMKVSADKVMCNLCSKMLSYKCKAVHNLRRHLQIKHPECCKKPENLRLKLQISSVNEIEPTEVIDPEKNFIDITDTNVILVDDENQPPPARSCRSVRPKKSFVWNYFEEVEYGVAKCYMCSRVLSFRGGGTNNLTRHLRIRHAIPINDLQNEPTQIPVSDEMAETAHLLVNDEAQTMQLPIDEEAQAVEYNVDGKTETIQLPYTEEVKAAELPVIVQPVQVMDNMSVIDNNTINDSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-