Ccar048447.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- -
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000011.1:10411902-10418637[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-10 6.3e-07 31.2 0.3 1 38 40 78 40 89 0.93 2 3 2.5 8.3e+03 -1.2 0.0 23 36 85 98 81 98 0.87 3 3 3.4 1.2e+04 -1.7 0.0 35 41 165 171 154 175 0.66
Sequence Information
- Coding Sequence
- ATGGCAGATGTCTGGAATGGAAGTAGCTGGACTAGGgatCCAGAAACCGTACCTAAAAGATCTTCACGGATTCGTAAAGTTAGGAATTCAACTGATTATCCTCAGCAGAGACAGGATAGATGTCGTTGGACaattgaagaaaagaaaaaattactgaCTGCTCTAAAAAAGTATGGTTATGAGAATCTAGAAAAAATTGCTCTAGAAATTGGCACAAAAACTGAAACAGATGTATTACTTGCAATAAGGTATTGGAGACGATTAGCTGTTAATGTAAATTCAAGATCAATTAATATTGCTAAAGTTCATGCTAGAAGGGAGCTTTATTTATGGTTGAATGATTTAATAAATGGAAAACCAATGAAGAAGTTACCTGGACATATGATgctttttatattaaattcatttgAAGAATTATCTAATGTATCAAGAAACAGTGAATTACGAACATTACTGTCACATGTTAATCGTATGATTGAACATTCATGGACACCAAAACATGTTAAGCAATATGGAAGAAATATAAAATCGGAGGAGTCTGAAGAAACAGCATGCTCAAATATGCGAGAATTAATTAAATTGGCTGATATAAACCCAATTGAATTACCCGCTGATAGCGGTATTAGAAAAACTTTAAACATGTGTCAAgcccaataa
- Protein Sequence
- MADVWNGSSWTRDPETVPKRSSRIRKVRNSTDYPQQRQDRCRWTIEEKKKLLTALKKYGYENLEKIALEIGTKTETDVLLAIRYWRRLAVNVNSRSINIAKVHARRELYLWLNDLINGKPMKKLPGHMMLFILNSFEELSNVSRNSELRTLLSHVNRMIEHSWTPKHVKQYGRNIKSEESEETACSNMRELIKLADINPIELPADSGIRKTLNMCQAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -