Ccar039214.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- NCOR1
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000007.1:15776157-15809680[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-16 1.4e-12 49.3 0.5 3 46 145 189 144 189 0.98
Sequence Information
- Coding Sequence
- ATGCTTGGAAAGTcaagtGGAGAGAAAGGTGTACCTCATCCATGTGCAGTTTGCAAAAGTGATTCAGTTTCATCAAGAGCTTTACCACGGTCCCATGCTCATCAGTATGGTCTGAGGGAAGAAGAAGTTGCTCCAGGTGCTAGAGTTTGTAATTTGTGTCGTTGCAAGGCAGTTCGATCGCGGTACATTCAGTGTCCATTGCCAACTTGTCCTAATACAAAGAGCCATCGTGTTAAACGTTTGCGTCCACTCCCTTGTAAATGGGCTGAACTTCCTCATCATATTAAAGAGCCAATAATTGCAGAATTTCaaaTACCACCAACTGTAACAAAGTGTTGTTCAGCGTGTTTTAATCGCATTCTTAGACGACTAACCCCAACAGAAGAAGGCAATGCTAGTTTAGGTTTGGGATGTGCAGCTGGACAACTTCTGCGTTGGacagaagaagaaattgaagctTTAAAACGAGGAATCCGGGAACATGGCACACGCTGGTCCGAAGTAAGCCATGTTGTTGGACCTACAAAATCTCAACATCAGTGCAagaattattatttcaattatcGAAAGAAACATGGCCTAGATCAATTACTACAGGAGTACAATAAGGAACATTTAGGTGAAGAGAGAAAGCCTACTGTTACAGATGAAGAAGAATCAGGATCAAGCACTTCCAGCTGCGATGAAATGCTGGGAGCTGTTGCAGTTGGTGATAGCGATACAGCTAGTGCAGCTTCACCTCATCCTCAAGGCCTTCATCCTCCAGATAGAGgTGAAAAAGTACCGTTGGTCACTTCGGCACCCGTTGAAAAAACAGAAGGGGTAGATGGAAGTCGGACGGAATCAGAACCGGCAACTGGACCTTTAGAAAATATTACTTCGACTACTCCAATAACTGTTGCTTCATCAGGTGTCGCTGTCTCATCAGCGCCTACTCTAACATCTACTAACTCTCAGATAAACCCAACAAGAAACTGTAATGAGTTGCTTTTGACTGAAGTCAGACCTCCTACTGTCACTGTGAATCCTGCTCCTCGAAAAGAGGATAATGATAGCTCAGCCACGGAGACAGCAGACGAGGGTCAAGGGGGTGATGAGGCCGAGGGGGGAACTGCTTCACCTAAAGGAGGTCCAGTTCCTCCATCCCGTGATGATACTGCATCTTCACCTCTCACTGTAAAGGACTTAATGTTGGGGGTTATCGAGATGCAGTTGATGAAGAACCAAAATCAAGGGTCCGTCCAGGGCCCTCGAACACAAACAGGACCTGCACCAACTATTTCTTCCATTCTAAAAACTGACCATGGATTTGTAAGGGACATTAAAAGTCGGGAACCTCAGTCTCAGTCTTTAGCAACGCTTTCTGTTGTCAGTTCACAGCATGCAGTGCAACCAGAACTTCCAAAAGAAGGACTGGTTGTCGTTCagGTCCAGCAAGCTCTGCGTGAGCGTGGTGAACCAGAAGCAGTTACTTTAGACCTCAGTCTGAAGAAACCACGTACGGAATACATTCCGCCTCCAGCTAGTACAAAGCCACCATCTGGCCCTATGCAACATCCACATAATGTAACCGTGTATCGTACGGCTCCTAATCCGATTGGGACATCTGTGCCTCCTAATCCTGCTCCTGATTCAAACTATTATCATcatcaggTTGTAGAAGTGAGTCGAGGTGGAAAAATGTATGTAGCTGGTGGTAACGTACCAGGTGTAACTGGTTCAACTCCACATCTGGTTATGTCTCCAGCAGCTCAGTCACAGCTTCTCACCGTTCGTACTTCTcatccaaatcctagtaaaattaataaggtTGGATCTCCTCAACATTTGTCTGGTGCAAAACTTTCTCCGAAACTTTCACCAAGTTTAGTACCAAATAAAGGTGGATCATCTGGTCCACCTGGAGCTGGAGGTGGTTCAATTTTGCATGGTACTCCGGTCTCTTCGCCTACTTTATACTCGTCTGTACCTGTTAGTGGAGCCCAGCATCAGCCTCAGCCTCGTTATGATCCACCTAATGCCACATTATTAAGACAAATGACTCCACCTCATAAAGATGCTCCTTCTGGATCTATTACTCAAGGTACACCACTGCACCAAAGAGGAAGCCTTTACCCTCCAGCAAGTGGTCAAGAATTCTATGGAGGAAACAATGGAGGTAAAAGAGGTACACCTCAAGCACCTGGATTCTTTCCTCCCCGTCCACCTGCGTATTCTGTTGAACAACGTCAAATTATTATGAATGACTATATCACATCCCAGCAGATGCATGGATCTGGTGCGCGAAGACCTGGTGAAAAGAGTACAGCTTTATATTATCAATCAAGACAAGGTGTCATTCAAAGACATAATACTAAACCGCCCAGTCCGCATCATTATCCTCCCGGACATGAAGCTTTCTCATCGCTTGTAGATGTGGCTGTTAGACAACCAAGTCTGCCTGTCCCTAATGCTGAACACAAAGAAGAAAAACGACTTTTACATGAAGGTTTAGGAGAACGATTTAATAGAGATACTCCACAAGATAGGTTTGCAAGTCGCGAACAAGAACGTTACGTTCGTGAAAATCATCAAGTACATCATCAACAACCTCAGCAGATGAGAGATAATCATTCTCATCACCATCAACAACAGCAGCAACAAGCACAGCAACAGCAACAGCAAGCGGCAGCTGCTCAGCACCATCGTGAAAGAGAATTACAACAAATTAGAGAACACCAACTGCATCAGCAACAACAACAGCAATTCCATCAACAACAGTGCGATCATCTCCAGCAACAAAAACAGTTGCAACATCAGCAGCAAAAACAACAACAGCTTAGGGAGAGCCAGCAACAACAACAGTCTCATCAACAACAGTTACaacagcagcaacaacaacatATGAGAGAGAACCATCATCGTGAATTTGAAAATAATCGTGGCCGAATGCAACAACAGTTAGCCGCTTATCAACAACAGCAAcagcaacagcaacaacaacagcagcagcagcagcagcatcAACAGCAAGCTCAAATACGATACCCTCCATCATCAAGGGAACCTCCTATGCCACCTACTTCAAGATCTCATTTAGAAGCTAGtatgcGGGAAAACAGGCCACCTGGCATGAGAAGTAGCCAAGGTCAAAGTCAAAATGAAAGTTCAACGTTAACTGCGGCAAGTCTGATAGATGCAATTATAACTCATCAGATTAATCAGAGTGCTGAAGGAGGAGCTGGTGGTGGTGTAAACCCTGGTAGTGCTCCTCAACATCAACCGACCCGACCTGGAGATAGACTTTTCCAAGGATTTCATAGAGATGGATCAGAGGCTAATGGGAAGGTTTCACCATTGAAGCCGATGGGATCAGGGAGTGCCATCAGCGGTAGTCCTGAAGGAAGTAAACAGGGAGTTGTTACTCTCAATGATACGATAGATTCAGTGATCAACAAAGATTTTGCGGTACGTCATCAACATCCATATCAGGGATTCGAAACCCAAGCTTGGAAGTTGAGACGAGCGTTACAGCAAAAGGAGTTGGATCAAGCCCAAGCTCAAGCGCAGGCTCATGCACAAGCGAGAGAGAAAAATGAAGATAGAAATATAGTGCGAATGGCAGGTCAGCTATCTCCGTCTTCTCGTACGCGTTATTATTCAGAACCGAATTCACTATCGCCACTTGATTATGTGAAGAATCGGATCGCTGAGGTTATGCGGACTTCAGAAGAGGAAgggggtggtggtggtggtaaaAGTGGTGGTGCTGAGAGTCCAGGTGGGGGTGAGATGGTTATCGATGAGGGGGAAGAGAGTGGACAAGTCGTTCAAGTGTCTCAACCTCCTCAACCCCCTCCACCCACTCCTTCTTTTATAACGACGTCCAATACCTATACGTATCCGTTTTCGGCGCTTAGTTTAAATGCAGCAGGAGGTGCGACTCCTGTCAGTGTACCGGCTCCTCCAAAACAATCTGTGGCCCCACCTTCGCAACCACCTTCTTCGGAAACTACACCACCTGAGCCAGCACCCCTTCTTTCGGCTCAGTACGAACCATTATCGGATGAAGATTAG
- Protein Sequence
- MLGKSSGEKGVPHPCAVCKSDSVSSRALPRSHAHQYGLREEEVAPGARVCNLCRCKAVRSRYIQCPLPTCPNTKSHRVKRLRPLPCKWAELPHHIKEPIIAEFQIPPTVTKCCSACFNRILRRLTPTEEGNASLGLGCAAGQLLRWTEEEIEALKRGIREHGTRWSEVSHVVGPTKSQHQCKNYYFNYRKKHGLDQLLQEYNKEHLGEERKPTVTDEEESGSSTSSCDEMLGAVAVGDSDTASAASPHPQGLHPPDRGEKVPLVTSAPVEKTEGVDGSRTESEPATGPLENITSTTPITVASSGVAVSSAPTLTSTNSQINPTRNCNELLLTEVRPPTVTVNPAPRKEDNDSSATETADEGQGGDEAEGGTASPKGGPVPPSRDDTASSPLTVKDLMLGVIEMQLMKNQNQGSVQGPRTQTGPAPTISSILKTDHGFVRDIKSREPQSQSLATLSVVSSQHAVQPELPKEGLVVVQVQQALRERGEPEAVTLDLSLKKPRTEYIPPPASTKPPSGPMQHPHNVTVYRTAPNPIGTSVPPNPAPDSNYYHHQVVEVSRGGKMYVAGGNVPGVTGSTPHLVMSPAAQSQLLTVRTSHPNPSKINKVGSPQHLSGAKLSPKLSPSLVPNKGGSSGPPGAGGGSILHGTPVSSPTLYSSVPVSGAQHQPQPRYDPPNATLLRQMTPPHKDAPSGSITQGTPLHQRGSLYPPASGQEFYGGNNGGKRGTPQAPGFFPPRPPAYSVEQRQIIMNDYITSQQMHGSGARRPGEKSTALYYQSRQGVIQRHNTKPPSPHHYPPGHEAFSSLVDVAVRQPSLPVPNAEHKEEKRLLHEGLGERFNRDTPQDRFASREQERYVRENHQVHHQQPQQMRDNHSHHHQQQQQQAQQQQQQAAAAQHHRERELQQIREHQLHQQQQQQFHQQQCDHLQQQKQLQHQQQKQQQLRESQQQQQSHQQQLQQQQQQHMRENHHREFENNRGRMQQQLAAYQQQQQQQQQQQQQQQQHQQQAQIRYPPSSREPPMPPTSRSHLEASMRENRPPGMRSSQGQSQNESSTLTAASLIDAIITHQINQSAEGGAGGGVNPGSAPQHQPTRPGDRLFQGFHRDGSEANGKVSPLKPMGSGSAISGSPEGSKQGVVTLNDTIDSVINKDFAVRHQHPYQGFETQAWKLRRALQQKELDQAQAQAQAHAQAREKNEDRNIVRMAGQLSPSSRTRYYSEPNSLSPLDYVKNRIAEVMRTSEEEGGGGGGKSGGAESPGGGEMVIDEGEESGQVVQVSQPPQPPPPTPSFITTSNTYTYPFSALSLNAAGGATPVSVPAPPKQSVAPPSQPPSSETTPPEPAPLLSAQYEPLSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -