Ccar019157.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- DNAJC1
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000001.1:393317558-393335266[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-06 0.017 17.0 0.0 2 40 303 344 302 350 0.85 2 2 3.7e-11 1.3e-07 33.4 0.1 2 44 427 474 426 476 0.89
Sequence Information
- Coding Sequence
- ATGCCACGATTAAATTTAGTATCATTATCTGTTATCTTGTTGATAACTGTTGTCAACAATGCAGTTTGTTGGGATTCAGATGAATTAGAAGTATTCGATGTAGTGGAAGAAGTaaaccaaaatttttatattttgttagatGTACCTCAGACTGCTGATCAAGTTCAAATTAGGAAGGCATTTAGACGCCTGTCATTAGTTCTACATCCGGACAAGAATGATGCTCCAGATGCTGAAGTTAAATTTAGACAGTTGGTAGCAGTACATGATATACTAAAAGATACAAATAAACGTAAATGTTATGATAATGTATTGGAAAATGGTTTGCCTGATTGGAAACAAGCAATCTATTATTACCGTAGAGTTCGTAAAATGGGCCTTGCTGAAATGTCTGTCATTCTATTCATAATTATAAGTATTGGGCAATACCTTGTTGGTTGGGCACAATATCTAGAACATAAATTCACAGTAGaagattatttaaattcaaaagcaAAACGGATTATGAAGAAACAAAAGAAAGGAGGTAAAGTTGATACTTCTAGTTCCACGTTATTGCCACCAGAATGGGATTTAGAATCATTTAAACCTAGTATTGTGAATACATTACCTTTTCAAATCCCAAGATTTATTTGGTTCCTTCTTGTTGGTGCTCCTCCATTAACTTACCAGTTTTTACGTGATTACTGGGAGGAACGCCAAAAATTGAAATCACTAGAAGCAGAGGAGCAAGAGGAATCTGAAGAAGAAGAGATTGTTGCTGCACCACGTGGACCACGTCGTCGGAAACCAGGATTTACAGTGCCAGAGATTAATGATACAAATAACAGTGTCACTAAGACTGAAGCTAATGTTAATAAAACCCCTAAACAGCCCAAGTTAAGTGTACCACCAGTTATAACTGGTGGTTTATGGACAGATGATGATTTAGCAGAGTTGGTTAAATTAGTTAAAAAGTATCCAGTTGGAACTTCGGAGCGATGGGAAAAAATTGGTGATACCATGAGAAGACCACCTGCTGAAGTTGCACATATGGCTCATAAGGTGAAGGATAACATGGTAAAATCGTTAGGTAATAATAAAACTCGTAATAGTTTTAGCAATTCAAGTGTTGACAATGACAGTGAGTCAAGTGATGAAAATAGTGATAATGATAGTTTGATACCTGCACAGACTGACGAACCATATGTAGTACCAGTTGAACCTAAGAAAGTGAAAACTCGAGGTGGTAAATTAGGTGTGAATGGTAATTTGAATTCAACGAATAGTGGTAATAGTAATAATTGGTCTCAAGTACAACAGAAAGCTTTAGAAACAGCTTTAGCTAAATATCCGAAAGCTGGTACTACAGATAGATGGGAAAAGATCGCCAAAAGTGTTCCTAATAAAACGAAGGAAGAATGTATGTTGCGGTATAAACAGATAGTAGAATTAGTGAAGAAAAAGAAGGAACAGGAAAATTCAGATGAATCAGCCCCTACTCAAACAGCTGCTGTTCAGTCTACAGACGAAACAAGTATGAAAAAGACAGAAGAGTCTGATATCTCACCTGATAATGAGGAAATTTCAGCGTCATAG
- Protein Sequence
- MPRLNLVSLSVILLITVVNNAVCWDSDELEVFDVVEEVNQNFYILLDVPQTADQVQIRKAFRRLSLVLHPDKNDAPDAEVKFRQLVAVHDILKDTNKRKCYDNVLENGLPDWKQAIYYYRRVRKMGLAEMSVILFIIISIGQYLVGWAQYLEHKFTVEDYLNSKAKRIMKKQKKGGKVDTSSSTLLPPEWDLESFKPSIVNTLPFQIPRFIWFLLVGAPPLTYQFLRDYWEERQKLKSLEAEEQEESEEEEIVAAPRGPRRRKPGFTVPEINDTNNSVTKTEANVNKTPKQPKLSVPPVITGGLWTDDDLAELVKLVKKYPVGTSERWEKIGDTMRRPPAEVAHMAHKVKDNMVKSLGNNKTRNSFSNSSVDNDSESSDENSDNDSLIPAQTDEPYVVPVEPKKVKTRGGKLGVNGNLNSTNSGNSNNWSQVQQKALETALAKYPKAGTTDRWEKIAKSVPNKTKEECMLRYKQIVELVKKKKEQENSDESAPTQTAAVQSTDETSMKKTEESDISPDNEEISAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -