Ccar007889.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000001.1:134139372-134144473[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-17 1.8e-14 54.9 0.1 1 45 211 256 211 256 0.96 2 2 2.4e-17 5.5e-15 56.6 0.0 1 43 631 674 631 676 0.95
Sequence Information
- Coding Sequence
- ATGGGGAGGACGAAATGGAGAGAATACCAAGAAACTGTGCTGAGCACCTGCCAAACAGAAGAATCTATTCCAATGGAAAGCAAAGATTGGGAACCTTCGGACAAGTGTAACCTTTGTCAGGATAATAAGACTGCCTGTTCTGATGCGGCAACGTTGCCTCGTCCCACCTCGGAGTCAGGGAGTGTGAGTAGCGGAGTAGAGAGCGAGCCCTCTACTGAGGCTATGACAACGACTTTGGAGTCAGCCGTAGCATCCTCAATGGCGGCAAGCATAGCCGCCGTGGCAGCCCTTACCTCTGGAAAGCCACCTGGAACCTTATTTCCTGGACATCCTTTATTTCCACAGTGGTACCTGACGCCTGGTGAATCCCTAAGAAAGGCAGATTCCCCTATGGTCATGCCTCTTCCACCTTCTGCATCCGAACAGCCCCTCGATCTTAGTTCCAAAACTTCATCGTCCACTTCCGCTCCTAAATCCCCAGAATCTCCTGTCGACATTCCTTCCAGTTTGCAACATCTTATGCCCTCGTCGCCTGGGGTAACAACGCAATCTCTCAAAGTGCCGTCGCTCAGCAGACAAATATTCAAAGCAAAGCCAAGATTGAGTGCGGTGGCTGGCCGCCGAACCTATACTGAAGAAGAGCTGCAGGCAGCACTGCGAGACATCCAAAGTGGAAAATTGGGAACAAGACGAGCAGCAGTCATTTATGGCATCCCACGTTCAACACTACGTAATAAAGTGTACAAACTTGCGATGGAGAGGGAAAGAGATTCTCATCTACTTATAACAGCTCCTCCAGATAGAGCTGATGAAGAGGCAGAAGACGAAGATGAAGATCGTGACCTTTCTGGTGCTGAAGAGGAACGAGAAGTTGAAAAAGCGTTAATGAAACCATTGTTTACAATGGAGGACTTGATGAGGATATCATCTGAAAACCCAGCACTTCTAGGAAACCCCGAGTCTCTTAAAGCTCTTTTACAACAAGGTGGCAGATACTTAGGGAAAGATGATGTGTTTCCATTAGTTCCACCTGGAAGTGATCTCTGGAGTGGATTAGACCACTCTGCACTTGGACCGTACATTTCACAACTTTTAGCAGGATCCGTTAGTCATCCTGGAAATCCATTTGTAGCTAACAGAGTTTCACCAGGTGATCAGAATGCATCTGAAGCATCTGGTGAATTTTTGCCTAAGTTTCCACAACCAATACCTGACCTAGTTAGACGAATGATGACCGGAGATAGGTTATTACCAGTGGACCAAACAAAGAAAGACAGAAATTATCCAATAAATGGTTCTAGACCTAGTGATCCCGGTCCATCTTCCTCAAGACTGTCACAGGAAGCAAATCGTGAGGATACTTCGGGCTCTGCAACACCACCTAATGTTATCCTTAAAATTCCGTCCTTTCGTCCTACTACCAAAAATGGTGTCCCGGTAGAAAGTGCTCCACTTCATCCTTCATATCCTCTTGGTGTAAAAGTGGGGGACTCTAGTCAACATTCGGTAGTGTCACCACCTATCAGTGGAACACGGAGTGAGTCTTCTTCACCACCTTCAATGGTGGGTAAGGGTATTGGTGTCAGCCTAAAAGACGTTATTGCAAAGAGTATTAGCCAGAAATTTAACCAACCACCTGATCTTCAGCACTTACAGCACACACCTCCTGGTTTGGACCACTTCAGACGTAGTGAATTCTCTCCTCATCTGACATGTAATACTCCAATTATAAGAAATCATAACAACAATCATCTAGACGATCGCAAATTGATGCCTGGTCAACTGGGAAAGAACACCAGTGTATCAACATCAAGTTCTAGTTCAAGTACATCAACAAGTGCGGCCAGTGGAAAAGGAACTCGTCCAAAACGTGGTAAGTATCGTAATTATGACAGGGATAGTCTGGTGGAGGCTGTGAGGGCTGTACAAAGAGGAGAAATGAGTGTTCACCGAGCTGGCTCATATTACGGTGTTCCTCATTCTACACTTGAATACAAAGTTAAGGAGCGTCATCTAATGAGGCCAAGAAAGAGAGAACCAAAGCCACCCCAACAAGAAGAGGTAAAAAGAAAAGATGAAGGAAATATTCTTAGAATGTCTCCTGGAGAGAAATCTAAGCCTCTTCCACCTAAACCACCCAAGACTGCTTTTGCAGCATCAACACCGCTTCCAACTGGACCAAATGGTCTGAAGATCCCGTCTATATTTGAGCCGTCCCTAGCATTCACAACAGCACCTCCTTTTCCATTCTGGTCACCACCTTTCCATCATCTTCCAATGGATTATCCTAGAGGACCCAATTTCTCACCCAATCCTGAGCAGTTCTTTGCATCTCAAATGATGCAGAGGTTACAGGAAGATACATCTGCAAAGAAGTCATCACAGAGTCCACCACCTTCTCTTGGGAAATCAACAAGAGAGATTGCTGAGAGTTTATATGATGGAACAGGTGTTAATGGTAGCTTCTTAGATGGTATTATAAGATCGAGCTTGGAAACAGGCTTACCACTTGCTGCCAGAGAAGATGCCTCCAAAAATACGGACCAACTATCTGGCAAATCATTGCTGGATCAGCTCTGCAGGAATAGTCGCTTGGCACCTCTTGTTAGTAGTGAAACAAAAGGAGATCCTGAAGCCAGTCCACCAAAGGCTGAACCAATGTCACCTTCTGCAGAACAACAGCCATCTGGTGAGCAGGAGGAGATTGAAGAAAAACCTTGCTCGCCTCCGGTACCGACTGACACCAACCCGTCAGACACAAGTAGTTCAGATATAAACAAAGTTGACGATGAAAGTGCCTGTGATAGATTAAGAACTGTTAAAAATGTAGACAATGCTGATCTAGCCAAAGAAGAAGATGACACTGAGTCATAG
- Protein Sequence
- MGRTKWREYQETVLSTCQTEESIPMESKDWEPSDKCNLCQDNKTACSDAATLPRPTSESGSVSSGVESEPSTEAMTTTLESAVASSMAASIAAVAALTSGKPPGTLFPGHPLFPQWYLTPGESLRKADSPMVMPLPPSASEQPLDLSSKTSSSTSAPKSPESPVDIPSSLQHLMPSSPGVTTQSLKVPSLSRQIFKAKPRLSAVAGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDSHLLITAPPDRADEEAEDEDEDRDLSGAEEEREVEKALMKPLFTMEDLMRISSENPALLGNPESLKALLQQGGRYLGKDDVFPLVPPGSDLWSGLDHSALGPYISQLLAGSVSHPGNPFVANRVSPGDQNASEASGEFLPKFPQPIPDLVRRMMTGDRLLPVDQTKKDRNYPINGSRPSDPGPSSSRLSQEANREDTSGSATPPNVILKIPSFRPTTKNGVPVESAPLHPSYPLGVKVGDSSQHSVVSPPISGTRSESSSPPSMVGKGIGVSLKDVIAKSISQKFNQPPDLQHLQHTPPGLDHFRRSEFSPHLTCNTPIIRNHNNNHLDDRKLMPGQLGKNTSVSTSSSSSSTSTSAASGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQQEEVKRKDEGNILRMSPGEKSKPLPPKPPKTAFAASTPLPTGPNGLKIPSIFEPSLAFTTAPPFPFWSPPFHHLPMDYPRGPNFSPNPEQFFASQMMQRLQEDTSAKKSSQSPPPSLGKSTREIAESLYDGTGVNGSFLDGIIRSSLETGLPLAAREDASKNTDQLSGKSLLDQLCRNSRLAPLVSSETKGDPEASPPKAEPMSPSAEQQPSGEQEEIEEKPCSPPVPTDTNPSDTSSSDINKVDDESACDRLRTVKNVDNADLAKEEDDTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -