Ccar039509.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- ct
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000007.1:25133183-25190821[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1e-27 6.7e-23 82.3 0.0 3 72 394 464 392 469 0.95 2 3 3.2e-31 6.9e-27 95.1 0.1 3 77 790 865 788 867 0.96 3 3 7.6e-30 1.6e-25 90.7 0.0 3 75 1030 1103 1028 1106 0.95
Sequence Information
- Coding Sequence
- ATGATTCGGGGGAAGGAAGAAGAGCTCGAGGTAGTGTGGTGCGAAGAAGTCGTGGGGGGAAGAGTGATGGTTGGGGGTGTGCTAatTTCCCAGCTTGCAGAGGATGTACAAAGACTGCAATCCAGCATTGGAAAACTTCAGGAAAATTCTTCCAACCAAATTGCTCGATTAGAAGAAGAGTTGGAACATAAACGCCAACATATTTGTAGGCTAGAAGCCAGACTCGAAGCTCAGAGAGATTACGAAGACTTAAAAAGACAACttagtatACTGAGATCTTTAGAACTGCCTCGAAGTGGAGAAGCAAGTAAATCATTAGAAGCTGTATTGGCTGAAAGAAGTAAATCCGTCGGTTTACAGCAGCAAAGTGAAGGTAACACATCGACTGTTACTGCAAAACCTCCGTCATGTACAACGCCCTCCTCCGAAACGAATTCagGGGAGGTTCATAACAGTACTGAGACCGGAGTGCCGCCCCTAATGTTTCCCGCTCCGGCGCCACCCCCTCCACCACCTCTTCAGAACGTTGAAACGTTCGGTTCGTTCTTGGGGGAAGAGATTGTGGCTAACTGGAGGCGATCTTTGGAGCGGACCATCCTGAGCCAGGGGGCGGCGGCTACCCCGACTCCGATGAACGCTGGCCAGCAACCTCCGCTGACCCCGACTCCTACGCCTCCGCAGCACGCACAAGACAACGCCGACGAATCTTCTGggAAACATGAGCAGAAAGCTGAGACACCAGAAAGAGACGGTGATGTTGACACACCGATGCCAGCGACTTCTTCACCGGGCGCCACGGAATCTCAAATGAACGGCCGTGGCTCGACCCCTTGCAAAAGTCCAGCTGCTGAATCGGACGCTtcgaataataataacaacagtaatACGAACAATAATAACACGAACAGTCACAATAACAATGTACCTTCAGGCCTAGTGAACGGAATGTGTGGCTTGAGCGTCGGTCTCAATAATAACGTCTTATCCTCATCGACGCCTATCAACTTTAATGATGTGATAAAAAGCCCGTTCAGGTTCGACGATAGATCTCCTTTTCGCTTCAATGATGATCCCGGTTCAATTGTCGGCCGTTTCGGAGAATCACTGATTCCTAAAGGTGATCCGATGGAAGCTCGTCTTCAAGAGATGCTTAGGTACAATATGGACAAATATTCCACACAGAATCTCGATACCCTTCATATAGCGAGGAAGGTACGAGAACTTCTGTCCATCCACAACGTCGGACAACGCTTATTCGCCAAATATGTTTTAGGATTATCTCAGGGTACGGTATCCGAATTGCTTTCAAAACCAAAACCGTGGGATAAACTTACGGAGAAAGGTCGAGATAGTTACCGAAAAATGCACGCTTGGGCCTGTGATGATAATGCAGTACTTCTTCTCAAATCGCTGATCCCTAAAAAAGGTAAAGATACAGGTATACCATCTGTATTTTCACGGGGCGATGCTGATATCACAGAAGAACGTATCGCGCATATTTTAAATGAAGCGAGTCAATTGATGAAACCTCAATCGCATGAAGATAGTCATAGTAATGATGATAGTAAATCGCCAAATCATGGGCAGTGCCCATCACCTCTTGGTCGAGACAGTTCACAGAATCGACGTTTGAAAAAGTATGAAAATGATGACATTCCACAGGAACAAGTCGCTAGGATATACCAAGAAGAATTAGCAAAATTGATGGGCCATAGGCTTGAAGATTCCATGCGAGGAGACCAACCATTCCCAGGATTAATTTTCCCACACTTTTTTGGAACGGGAGGCAGAGGAGAAGAGATACGAATGGCACTGGACGCCTACCACAGAGAGCTGGCCAAGTTGAATGCACAATGTCCAGGAGTTGCCAACCCAGGTCTGTTTGCTTTGCAGCAGCAAGTGCTGAACCAACATCAGCAAGCTGCATCCTTGACAAACCCTCAGAACGGGATGGCTCAGGATCTGTCTTTACCGAAAATGGAGAAGAAGAGTGATCTTGGAAAATTACCAAATGGTGAAATTATGTCAGAGCAGGGAATGAAGAAAGAGGGAACACCCAGTAGCCAGATGGACTCTGTTGCAGAAGCAATCCGGCATGCCGGGAGTGCATTCTCTCTTGTCAGGCCGAAAACAGAGCCTGGAATGGGTCATGTATCGGCAGGTAGTTCTGCAAGTTCACCACTAGGAAATTCAATTCTTCCTCCCGAAGACTTTTCACCATCAGCGGCTGTCAGTCCTTTACAAAGGATGGCATCGATAACAAATGCACTAATTTCACAGCCAACTACACCTCACCATCATTCGCCTTCTCAGCGCCCTCTAAAAGCCGTTTTACCGCCCATCACTCAACAACAATTTGACCAGTTCAACAATCTCAACACAGAGGAAATTGTTCGAAAGGTGAAAGAACAGTTGAGTCAGTTTTCTATTAGTCAACGTCTATTTGGTGAATCGGTACTCGGATTATCACAGGGCAGTGTTTCAGATTTACTAGCAAGACCAAAACCGTGGCATATGCTCACGCAAAAAGGAAGAGAGCCTTTTATTCGAATGAAAATGTTTCTTGAAGATGATAATGCTGTCCACAAATTAGTTGCATCTCAATATAAAATCGCTCCTGAGAAACTGATGAGAACAGGAGGTTACGGAGTTAGCACAACTGGTTCCTCAGTATCAAAGCCACTACCTCCTGCATCAGGAAAACTGCCTCCAATGCCTCCATCTATGGATATGAAACAGAATGAAGGAGGAATGGGCCCACTCAATTATTTACATCCTCCACCACAAgtacctcctcctcctcccccaCCTATCCATTTATCAGCCACACATCATTTACCACCGAATCAACAAGTGACCCTTGACCAAATTAAAAAATCCCATCAATCTGTATCCTTACAACAATGTAGTTCCCTTCAACAACAGTCTCAGGCTCAACAACAACAAAGCCAACAGCAGCAGCAAAACCAACAACAGCAACAAAATCAACAACAGCATCAGCAACAACCACCACCTCATCCGCAGCAACACATGAGGAACCTTAGTCAACATGTAGCTCCATCTGTGTATGAAATGGCTGCTCTAACTCAAGATTTAGACACACAAATCATCACTACTAAAATCAAAGAAGTACTTCTAGCGAACAACATTGGCCAAAAGaTATTTGGCGAAGCAGTATTAGGTCTGTCACAAGGTTCCGTGAGTGAGCTTTTATCAAAACCAAAACCATGGCACATGCTGAGTATAAAAGGAAGAGAACCTTTCATCAGGATGCAACTTTGGCTTACCGATGCACACAACATTGATCGGTTACAAGCAATAAAATCAGAAAGGCGAGAACTGAATAAAAGACGGAGAGGATCAGGGCAACAGGACAACAGTAGTGATACTTCATCCAATGACACGTCCGAATTCTACCACAGCAGTGCAAGTAGTCCTCCTAGTGCTAAAAAGCAAAGGGTTCTTTTCTCGGAAGAACAGAAGGAGGCTCTGCGACTAGCATTTGCTCTTGACCCCTACCCCAGTGTACCCACAATTGAGTTTCTGGCAAATGAACTGACTCTTTCTTCACGAACAATTACTAactggtttcataatcatagaatGAGGTTAAAACAACAATCCCCTCATAGTAGTGATTCAAGTCAGCCGAACAGGGAAAATCAAGGTTCAGGATTTGACCCTGTCCATTTCAGAATGTTACTCAACCAAAGACTTGGAATGACAAGCATACCTGGACTTTCATTTCAACCCCCGTATTTCCCTCCTAATCCAGAGCTAGCGGCTCTGATATCAAGAGGGATACTTCCCTTGCAAGAACAAGTGTCAGGGCTTGATCTCAGTGTTAAACATGAAGCCGGCACCGACTACGAAGACAACGACAGCAGACTAGATTCTGAAGAATCTGATTCTGGTGTTCCTGAAATGACTCCGGTCCCAGAACCAAGAATCAACAGGAGAAAGCCTGCAGCTCCGCAGTGGGTAAATCCTGATTGGCAAGAAGAACCGGAAGTTATAAATGGCGTTTGTGTCATGCAGACTGAAGATTATACCGAAAGAGAAAGAGAAGCGGAAACAGTAAGAGTCGAACCAGTTCCGGTGatagaagaagaggaggaggaggaggaagaagaccAGAGTGTTAGATCATCACCGACATCAACATCGGCAAATAGAACTTCCCCGAATTCTGCCGATGTCAAATTAGAAGTTAAAGAAGAACCTAAtaatgaagaaagaaaaacaagTGAAGAAGACGAAAgacaaataaaagaagaaaagtgggatagtgaattttaa
- Protein Sequence
- MIRGKEEELEVVWCEEVVGGRVMVGGVLISQLAEDVQRLQSSIGKLQENSSNQIARLEEELEHKRQHICRLEARLEAQRDYEDLKRQLSILRSLELPRSGEASKSLEAVLAERSKSVGLQQQSEGNTSTVTAKPPSCTTPSSETNSGEVHNSTETGVPPLMFPAPAPPPPPPLQNVETFGSFLGEEIVANWRRSLERTILSQGAAATPTPMNAGQQPPLTPTPTPPQHAQDNADESSGKHEQKAETPERDGDVDTPMPATSSPGATESQMNGRGSTPCKSPAAESDASNNNNNSNTNNNNTNSHNNNVPSGLVNGMCGLSVGLNNNVLSSSTPINFNDVIKSPFRFDDRSPFRFNDDPGSIVGRFGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARKVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVLLLKSLIPKKGKDTGIPSVFSRGDADITEERIAHILNEASQLMKPQSHEDSHSNDDSKSPNHGQCPSPLGRDSSQNRRLKKYENDDIPQEQVARIYQEELAKLMGHRLEDSMRGDQPFPGLIFPHFFGTGGRGEEIRMALDAYHRELAKLNAQCPGVANPGLFALQQQVLNQHQQAASLTNPQNGMAQDLSLPKMEKKSDLGKLPNGEIMSEQGMKKEGTPSSQMDSVAEAIRHAGSAFSLVRPKTEPGMGHVSAGSSASSPLGNSILPPEDFSPSAAVSPLQRMASITNALISQPTTPHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGVSTTGSSVSKPLPPASGKLPPMPPSMDMKQNEGGMGPLNYLHPPPQVPPPPPPPIHLSATHHLPPNQQVTLDQIKKSHQSVSLQQCSSLQQQSQAQQQQSQQQQQNQQQQQNQQQHQQQPPPHPQQHMRNLSQHVAPSVYEMAALTQDLDTQIITTKIKEVLLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLTDAHNIDRLQAIKSERRELNKRRRGSGQQDNSSDTSSNDTSEFYHSSASSPPSAKKQRVLFSEEQKEALRLAFALDPYPSVPTIEFLANELTLSSRTITNWFHNHRMRLKQQSPHSSDSSQPNRENQGSGFDPVHFRMLLNQRLGMTSIPGLSFQPPYFPPNPELAALISRGILPLQEQVSGLDLSVKHEAGTDYEDNDSRLDSEESDSGVPEMTPVPEPRINRRKPAAPQWVNPDWQEEPEVINGVCVMQTEDYTEREREAETVRVEPVPVIEEEEEEEEEDQSVRSSPTSTSANRTSPNSADVKLEVKEEPNNEERKTSEEDERQIKEEKWDSEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00283206;
- 90% Identity
- iTF_00283206;
- 80% Identity
- iTF_00283206;