Ccar000845.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- Kdm5
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000001.1:20570895-20581132[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-10 2.2e-06 29.7 0.1 45 89 14 55 9 55 0.89
Sequence Information
- Coding Sequence
- ATGGTAATCGCTGGAACTTTGACTAGCCTTCCATATCGTGGTTTGGAATCGGTTTCACTGAAGAAAAAATGGTCTAAGGTAGCTGCTCAAATGGGCTtctttactaataaaaataatggcTCTCTGTTAAAAAGTCATTATGAAAGATTGCTTTATCCATATGATGTGTTCGATCAGAAGAAAAGCCAGAGCGACAGTACTGAGAATATCTCAAACCGGACCGGTGCAGGTGCTACTTTGACGGGTACCGGCCCCACTGGTGACAAGGAAGATGAAGATTATAAACCGCACGGCATACCATCAAGACAGGCTGTTAAACCCGAGAAAAATCAAAACGACAGACGTGCCAAGCGATACAGCGGAGTGATTTGTGAGAGTGAACCTAATCACCGGTGTGGAGTGAAGCTCGGTCAGGATGAAGATAAGGATAATAAAGAACTGAGGCGATTACAGTTTTACGGAGCGGGACCAAAAATGGCTGGATACAATAACAAGCGAAAATATGCTGATGACAGACCAAAAACTAAAGGAAAAGGAAAGAAACTCACGTCTGATTATGACCCGTTGGCAAAGTACGTGTGTCATAATTGTAGTCGAGGTGACAGTGAAGAAACCATGTTGCTTTGTGATGGCTGTGATGACAGCTACCACACTTTCTGCCTGATGCCTCCATTAACAGAAGTTCCAAAAGAAGAAGCCTTCCGAGTCAATTTACTAGGACCGGCTACAAAAGCTTTAACAACCTTTTCTAGGGTTTCTTCATTATCAATTGATTGGGGCTGA
- Protein Sequence
- MVIAGTLTSLPYRGLESVSLKKKWSKVAAQMGFFTNKNNGSLLKSHYERLLYPYDVFDQKKSQSDSTENISNRTGAGATLTGTGPTGDKEDEDYKPHGIPSRQAVKPEKNQNDRRAKRYSGVICESEPNHRCGVKLGQDEDKDNKELRRLQFYGAGPKMAGYNNKRKYADDRPKTKGKGKKLTSDYDPLAKYVCHNCSRGDSEETMLLCDGCDDSYHTFCLMPPLTEVPKEEAFRVNLLGPATKALTTFSRVSSLSIDWG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -