Ccar032165.1
Basic Information
- Insect
- Catonia carolina
- Gene Symbol
- Xbp1
- Assembly
- GCA_035578175.1
- Location
- JAQMRL010000004.1:36944158-36957406[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-18 3.9e-15 57.4 14.3 2 61 65 124 64 128 0.94 2 2 0.00058 1.8 10.4 0.2 33 60 110 137 109 139 0.89
Sequence Information
- Coding Sequence
- ATGTGCAGTCGACCGAATCTACCTACTAGAACCATTCTTTTAAAATCACCAGATTCTAACAAAGTAAGAGAAGTTATAATTACAGAAATTGTTGTACCAGACGGTTCTAATAAAAGAGCACAGTTTGTTAACAAAATGGATACTTTTACATCTAAGCAAAGCAGGAAACGACGACTGGACCATCTCTCAGTTGAAGAGAAGATTCTTCGGAAaaaattgaaaaacagAGAAGCAGCACAAACGTCTAGAGACAGAAAGAAAGCTCGTATGGATGAATTAGAAGCTACAGTCAAAAGGTTAACACAAGAGAATGAAAGGTTATGTGAGGAAGTAGTGAGCCTGCGTGATGAGAAGGATAGTTTAGCAAAGGAAAACGGTGCACTTCATGAGGAATTGTGGAGGTTGCGTGTCGAAGGGGCTACATCTGCCGGACCTGCAGCGTCCTTTAACCCTCTGCCGAAGGGAACGATAGCCCCGTCGGCATGCCTCTCCCAACGCCTTGTGAAGTTCCAGAAATTGTATCCTTACCTCCTGAGCCAACTAACCTCGCAACAAACACATCATcACACAGAATGTGAGGGTAAAACCGTGGTGGGGTCGTTACCAGAAAGCTTGGAATCCGAGAGACAAAATGAGTTTACAACAGAATCAACTGATATCAgcgaaataaaagttaaagaggaaatcaaagaagaagtagaagaacaAGTAACAAGTGTACAATCTCCGTCTGTGGTGCATGACGAGGTAATCATACTTTGTCATCAGAATGGAAACGGAACCAATGAATTCACTACGAATCTTAGCAATTTCATTGTAATAGAAGACGCAGTTGAAGAAGTCTGTTGTACATCTGATAATGAAGATGTGACAATGTCTTTGTCAAGTGACGATCAAACATTATCTTCGTTAACTGAATCAGAAGGAACTGATTTTATTGAAACCTCATGCTCTCCTATATCCGTCTGTGAAATCGAGGATGAAACCGATCACTCAGATCATGGTTATGAGTCTATCGATTCACCTCAAAGTGAACCTGATCAGTTGAGACAACTTTTCCCGGAATTATGGTAA
- Protein Sequence
- MCSRPNLPTRTILLKSPDSNKVREVIITEIVVPDGSNKRAQFVNKMDTFTSKQSRKRRLDHLSVEEKILRKKLKNREAAQTSRDRKKARMDELEATVKRLTQENERLCEEVVSLRDEKDSLAKENGALHEELWRLRVEGATSAGPAASFNPLPKGTIAPSACLSQRLVKFQKLYPYLLSQLTSQQTHHHTECEGKTVVGSLPESLESERQNEFTTESTDISEIKVKEEIKEEVEEQVTSVQSPSVVHDEVIILCHQNGNGTNEFTTNLSNFIVIEDAVEEVCCTSDNEDVTMSLSSDDQTLSSLTESEGTDFIETSCSPISVCEIEDETDHSDHGYESIDSPQSEPDQLRQLFPELW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -