Basic Information

Insect: Catocala sponsa
Gene Symbol: ush
Assembly: GCA_963564715.1
Location: OY751331.1:25553956-25557874[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0093 1.1 11.2 0.3 1 20 116 135 116 137 0.94

2 9 2.1e-05 0.0024 19.5 1.7 1 23 175 197 175 197 0.99

3 9 0.083 9.7 8.2 0.3 3 20 228 245 227 247 0.93

4 9 0.033 3.9 9.5 3.2 2 20 487 505 486 507 0.94

5 9 0.0063 0.74 11.7 0.1 3 21 536 554 534 555 0.90

6 9 1.5 1.7e+02 4.3 0.0 2 23 584 605 583 605 0.94

7 9 0.01 1.2 11.1 1.3 1 23 611 633 611 633 0.99

8 9 0.14 16 7.5 1.5 1 23 672 695 672 695 0.96

9 9 0.22 26 6.9 0.7 2 20 727 745 727 747 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0093	1.1	11.2	0.3	1	20	116	135	116	137	0.94
2	9	2.1e-05	0.0024	19.5	1.7	1	23	175	197	175	197	0.99
3	9	0.083	9.7	8.2	0.3	3	20	228	245	227	247	0.93
4	9	0.033	3.9	9.5	3.2	2	20	487	505	486	507	0.94
5	9	0.0063	0.74	11.7	0.1	3	21	536	554	534	555	0.90
6	9	1.5	1.7e+02	4.3	0.0	2	23	584	605	583	605	0.94
7	9	0.01	1.2	11.1	1.3	1	23	611	633	611	633	0.99
8	9	0.14	16	7.5	1.5	1	23	672	695	672	695	0.96
9	9	0.22	26	6.9	0.7	2	20	727	745	727	747	0.92

Sequence Information

Coding Sequence: ATGAATAGCAACCTGCATTGTTCTCCTGCAAATCgTGAGGACGAGGAATGGGGAAACGAGAGCGAGGCGATGCCGGGAGAACCTCGCACGCCGAGCTCAGGGGGCGAGCGGGCCGCGTCCAGCGGAGGCGCGTCACCTGCGTCAGGGGGCTCGCCTGCCGCGTCACCGCCTCGGCTACGCCTCAACCCTAGCCTCGCCACGGACCCCGCGCTAGCCCCACAGGCGGCAGCACTCAAGCATGAGCCTCCTTCACCATCACCGCCGCCACCTCCCGCTCCACAGGCGCGGGACTACCTCGCGCTGACCGCAGCCGCCTTCCCAGGATTTCTACCCACTCCGCCGGGCTTCATGTGCAAGCCATGCGGCATTCGCTACTCTTCACTTAGCACTTTACAAGCACATCAAGAACATTACTGTTCGAATAGAAGGCCGAAGCCGACAGAAGGTTCGGATACGCCAGCTGATCCTGCTGTAGATGAGTCTAGCAGTGACGCCAAGACGCCCCGGCCTGCAAGCAAGCAGTATACCTGTACTTACTGCAACTACAGCGCCGATAAAAAAGTTAGTTTAAACCGACACATGAGGATGCACTCTTCGTCCCCCGTTAGCAGTGGAACTCCAGCTCCGACGCCAGCCTCTAACGGTGAAGTGACCGAGGGTCCTCCAGTACAGGACCGCTACTGCGCAGACTGCGACATTCGCTTTAGCTCCATCAAAACCTACAGGGCTCACAAAGCGCACTACTGTAGCACACGGCAGGTTGTAAAGCAGGCTCTAGCAGCGGCTAGAGGCGGCTCGGCCACCTCTGGTTCTTCACCGCCATCACCAGGAGCGACGCCTCCTGCTCAGAACCAATATGCCCTCGCGTTGCCTACAAATCCGATTCTCATAGTACCTTACTCGCTGCTACGAAGTGCTAGCACCCTCCCAGGTGCCACATTACCTGATCCAGACACACCCTGCTTTTTGTTACCAAATGGAACATTCCAGCCGATTAGTCGAGCTTTATCTAACATCAACACAGATGGAAAGGAATCTGAGGTTTTGAAATCAGCCAATCGGCCACGAGAGCCCTCAAGAGATGGTGCTACACCTTTGGATCTTAGTGTGCGGCGGTCCCCTGAGTCTATAGTGACCGATGAGCATGAGAAAGAGAACAGAATACGGTCGGCAACACCAGAACAGATCGTGTGTGCTCCGTCACTTCCAGGGTCTCCAGGCACACCGTCGCCTTCCCATCGATCATCGTCACCCAGTGGCGAAAGTTCACCTAAAAGAAAGCGACGCAACTCCAGGGGTCCAACTCCAAAGCCCCCAAGTGTACCATCTCCTCCAGAAGAGAAGTTTACTCCGGTAGTGCCACCTGCGATCATACCTCCCGCCCTTGCTTTACGTCTCGCATCAGAACTGCCAGTCAACGCTGTGTCTCCACAAGTGCTGGTCAAGCAAGGGGTATCGAAATGCAAGGAATGCAACATCGTGTTTTGCAAGTATGAAAACTATCGCGTTCATAAACTGCATTACTGCTCTGCGGGTGGGGGTGAAGAGCGCGCGAGTCCTGCGCCACCAGAGCCGGGACCACCGCCGCAGTACCGTCAGCTGATCTGCATGGCATGCGGTATTCACTTTAGTTCGCTGGACAATTTGACAACACACCAATCTATATACTGCACCAAAAGAGAGACACGGTCGCCTCGTAGCGCGCCAGCTGAGGCTCCTCGGCCAACGTCAGGGTCGGAAGGCGGATGGAAATGTCCTTGCTGCGACGTCGTGTCACCGACTGCTGCAGCTGCTCAGCGCCACATGGAGGCTCACGCCGGAGTGAAGGCGTTCCGCTGCACCATCTGCCGGTACAGAGGGAACACGCTGCGTGGCATGCGCACACATATACGCATGCACTTCAACAACAAGAAGCCTGCTGATTTGCAGGAGGAAAGCTACATCGCATGCGTCGTTGAAGAGGACAGCCGCGAAGCGACTTCTCCAAGTCTTGCAGTAGGTGGTGAACGGGTCCATCGCTGCAGCAGCTGTGCCTACACCTCCACGTACCGAGGTAACGTCCAACGGCACGCACGTCTGGTCCACGCTACCGATGAACCTGATGAAGAACAAACCTCCCCAGTCCCAGTCGTGGACATCAAGAAGGAGCCAGAAACAGAAATGGAAGAAACCCCAAACTACTGCAAATCCTGCGACATATCGTTCAAATACGTGAACACTTATAAAGCCCATAAGCAGTTCTATTGCACTGCTAACAATCAAGATGCGACTGCTAATAATAATGTGCCGACGCCTGCTAGAGTCACAGATACTCCTGTActatga
Protein Sequence: MNSNLHCSPANREDEEWGNESEAMPGEPRTPSSGGERAASSGGASPASGGSPAASPPRLRLNPSLATDPALAPQAAALKHEPPSPSPPPPPAPQARDYLALTAAAFPGFLPTPPGFMCKPCGIRYSSLSTLQAHQEHYCSNRRPKPTEGSDTPADPAVDESSSDAKTPRPASKQYTCTYCNYSADKKVSLNRHMRMHSSSPVSSGTPAPTPASNGEVTEGPPVQDRYCADCDIRFSSIKTYRAHKAHYCSTRQVVKQALAAARGGSATSGSSPPSPGATPPAQNQYALALPTNPILIVPYSLLRSASTLPGATLPDPDTPCFLLPNGTFQPISRALSNINTDGKESEVLKSANRPREPSRDGATPLDLSVRRSPESIVTDEHEKENRIRSATPEQIVCAPSLPGSPGTPSPSHRSSSPSGESSPKRKRRNSRGPTPKPPSVPSPPEEKFTPVVPPAIIPPALALRLASELPVNAVSPQVLVKQGVSKCKECNIVFCKYENYRVHKLHYCSAGGGEERASPAPPEPGPPPQYRQLICMACGIHFSSLDNLTTHQSIYCTKRETRSPRSAPAEAPRPTSGSEGGWKCPCCDVVSPTAAAAQRHMEAHAGVKAFRCTICRYRGNTLRGMRTHIRMHFNNKKPADLQEESYIACVVEEDSREATSPSLAVGGERVHRCSSCAYTSTYRGNVQRHARLVHATDEPDEEQTSPVPVVDIKKEPETEMEETPNYCKSCDISFKYVNTYKAHKQFYCTANNQDATANNNVPTPARVTDTPVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00050390;
90% Identity: iTF_00405472;
80% Identity: -