Cspo036440.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Catocala sponsa
Gene Symbol
-
Assembly
GCA_963564715.1
Location
OY751351.1:16039764-16042755[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 8.2 9.6e+02 1.9 0.1 1 23 160 183 160 183 0.84
2 16 2.8 3.3e+02 3.4 4.8 2 14 186 198 185 202 0.88
3 16 0.085 10 8.2 1.5 3 23 238 259 236 260 0.92
4 16 0.24 28 6.8 1.3 2 23 316 338 316 338 0.96
5 16 1.1e-05 0.0013 20.4 1.4 3 21 344 362 342 363 0.93
6 16 0.99 1.2e+02 4.8 0.1 2 21 370 389 369 390 0.88
7 16 2.7 3.2e+02 3.4 0.3 1 23 423 446 423 446 0.90
8 16 0.00086 0.1 14.5 0.5 3 23 459 479 457 479 0.96
9 16 0.0063 0.74 11.7 2.0 1 23 485 507 485 507 0.99
10 16 0.024 2.8 9.9 0.4 3 23 514 533 513 533 0.97
11 16 6.4e-05 0.0075 18.0 1.0 2 23 539 560 539 560 0.97
12 16 0.05 5.8 8.9 0.2 2 23 565 585 564 585 0.95
13 16 2.3e-05 0.0027 19.4 2.7 1 23 632 654 632 654 0.98
14 16 0.013 1.5 10.8 1.1 3 23 662 682 660 682 0.96
15 16 0.0086 1 11.3 0.7 1 23 688 711 688 711 0.96
16 16 0.0027 0.32 12.9 1.3 2 23 717 739 716 739 0.95

Sequence Information

Coding Sequence
ATGGAATACTGGAAATCCAAGCTAAAGCATATTCTACACAGCACTCAATTCTGTGGTATATGTTTGAGCACTGACAACCTTGTGAACACAATCAGTGATCAGTATGAGATTGTTGTAGATGAAACAAGCCATAGCAGAACTTTAGCTGATATCTTAGATGTTGTATTTCAAGAGGCCTCAAACCTAGCTAGTTCCCAAATATGCAATAGCTGTACTAAAAAACTAATTgattcatacatatttatacaacaaGCACAAGAAACATTGAATATAGTTAATAGATGtctaaatgaattaattaacaaaacatgttatattcacaataatatattaaacaaggACCATTATAGTTCCAGTCTTTATAATGTTATGATTGCGTTAGATAAAAAGAACTTTGAAAATGTTGtcaataacaaacataaaacagaAGAAACATCAACAGTGGAAAAGAGAAAGATTCATTCAAgtaaaaaaagatttaaatgtttGATGTGTAATATAATTCTACCCTCATACAAAGCATGGAGTATTCATGAAATAAAtactcataaaaataaatgtaaacaatgttataaaacattcaaatctcagaaatgtataaaacattttaaatcgcAGTTTAGATTAAAATGTAAGATTTGCCTTCGAATAGTTCAAGATGGTAGATTGTTGGAACATCTTAAAGAATATCACGAACATTCTTCACATTTATGTTCAACGTGCAATGTCGCATTTTACTCCGTCAAAGATTTAGAAGCTCATAAGCAAGAGTGGCATCATAGCGACGTTAGTAAATGTTTGACGTGTTTGAAGAGTTGCTCAGAAGCAGAGCTATTGCTGCATCAGTGCAGGTTCGGCTGTAGCATCTGTGCTAAGGTGCCCTGCATTCACCACAAGTACTTGATGTGTTACAGACAGCAGATATTAAACGGGGCGCTCCGAGCTAAATGTTTAGACTGTCAATACCTTTGCAGAAGTAAGGAGGCCTTTCTGGCACACGTTAATATTCGTCATTTGAATAGGCATCTATGTCATAATTGCGATGAAACATTTAACTCACAATCTAATTTAAACATACACATTCGCAACTGTTACAGAAATGGTTGGATATGTCAATATTGTGATGTAGAATATACTAATCAAAGAATATATGAAAGTCATATAAAAGATTGTGGCAGCAATAATAGACGTAAAAAGGAACAACGTCCAGTGCCTTTAGATACCTCGAAGAGTGATACTAAACTTATAGAAGAAAAGCAAGATATATTTCCATGTGGTATATGTagcagaatatatttaaatgatgcCACGAGAAAAAGGCATATGATTCAAACCCACAGCAGACAGCAGAAAAAGAGAGTTGTAATTCTAGATTGTGTTGTATGTCAAGAGAAATGCGCTACAAAAGGAGAATTGATACTTCATATGAAAACGCACGGACCTGATGTAAAATACAAATGTAGGATCTGCAACGCACAGTATGAAACTTTACGACAATTTAGAGCTCACAACCGTAAACATGTAGGTCCATTTGCAATTTGTGAAGTTTGTGGCAAGGAGATGAgacaaattctattaaaaaaacatatgacTACCCACTCAGATTCGGTAGCGACTTGCGAAACGTGCGGCAAATCTTTCCAGAACACCGCTTTATTGAAATATCATCAAAAAGTACATTTAGAAAGCGTCCCATGTCCAAAATGTGATAAACTAATAAATCCTGCAAAATTGCGGAGACATTATAAGAATCACATAATTCAAGAGGACCCTGATTTAAAAGCAAATACGAAACAGACTCCGAACCTGAAATGCGAGTTGTGTGAATACAAAGCTTGGAACAACATACTCTTAGAGTGCCACATGAACCGTCACCATTTAAAAATCAAGCCGTACATTTGCCACATCTGCAGCAAAGCTTTTATaggaaaacatttattgaaaaagcATATTGATACGCATACAGTGGAAAAAACCGTGATGTGTATGATTTGTATGAAGAAGTTCGCCAATGCAGCATGTTTGAAGATGCATTTGCGTCTACATACTGGTGAAAGACCATTCACTTGTGAGATTTGTGGTGATAGATTCAGGTCTTCAAGTATACTTAATGTACATAAGCTGAAAAAGCATTCGGATAAAAATAGTTCGTGTCCAATATGTCAGAATAAGTTTCATACTGTAAGAGATTTGAGAAGACATATTATAAAGGTGCATTGGAAAGAGAAAGACAAGAAATTCAATCCTCGTGAGTTGAAAAGTTTAGGTGAGGAGCATTATCATTTGTTTCATGATGGTAGGCGAGTGAAAGTAGATGAAGAAGATCTTGACTTCCATTTGTCTtga
Protein Sequence
MEYWKSKLKHILHSTQFCGICLSTDNLVNTISDQYEIVVDETSHSRTLADILDVVFQEASNLASSQICNSCTKKLIDSYIFIQQAQETLNIVNRCLNELINKTCYIHNNILNKDHYSSSLYNVMIALDKKNFENVVNNKHKTEETSTVEKRKIHSSKKRFKCLMCNIILPSYKAWSIHEINTHKNKCKQCYKTFKSQKCIKHFKSQFRLKCKICLRIVQDGRLLEHLKEYHEHSSHLCSTCNVAFYSVKDLEAHKQEWHHSDVSKCLTCLKSCSEAELLLHQCRFGCSICAKVPCIHHKYLMCYRQQILNGALRAKCLDCQYLCRSKEAFLAHVNIRHLNRHLCHNCDETFNSQSNLNIHIRNCYRNGWICQYCDVEYTNQRIYESHIKDCGSNNRRKKEQRPVPLDTSKSDTKLIEEKQDIFPCGICSRIYLNDATRKRHMIQTHSRQQKKRVVILDCVVCQEKCATKGELILHMKTHGPDVKYKCRICNAQYETLRQFRAHNRKHVGPFAICEVCGKEMRQILLKKHMTTHSDSVATCETCGKSFQNTALLKYHQKVHLESVPCPKCDKLINPAKLRRHYKNHIIQEDPDLKANTKQTPNLKCELCEYKAWNNILLECHMNRHHLKIKPYICHICSKAFIGKHLLKKHIDTHTVEKTVMCMICMKKFANAACLKMHLRLHTGERPFTCEICGDRFRSSSILNVHKLKKHSDKNSSCPICQNKFHTVRDLRRHIIKVHWKEKDKKFNPRELKSLGEEHYHLFHDGRRVKVDEEDLDFHLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-