Cspo036433.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Catocala sponsa
Gene Symbol
-
Assembly
GCA_963564715.1
Location
OY751351.1:15990933-15994002[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00085 0.099 14.5 0.4 1 23 229 252 229 252 0.94
2 16 0.00017 0.02 16.7 5.0 1 23 257 279 257 279 0.98
3 16 0.0014 0.17 13.8 0.4 1 23 309 332 309 332 0.95
4 16 0.0038 0.45 12.4 0.4 3 23 394 415 392 415 0.95
5 16 9.8e-05 0.012 17.4 1.1 1 23 421 444 421 444 0.95
6 16 0.00063 0.074 14.9 0.3 2 21 448 467 447 468 0.93
7 16 0.042 4.9 9.1 0.6 1 23 476 499 476 499 0.94
8 16 0.0027 0.32 12.9 0.2 2 23 540 561 539 561 0.96
9 16 0.008 0.94 11.4 2.2 1 23 567 589 567 589 0.97
10 16 0.019 2.2 10.2 2.7 1 23 625 647 625 647 0.94
11 16 0.022 2.6 10.0 0.2 2 23 652 673 651 673 0.93
12 16 0.0012 0.14 14.0 1.6 2 23 691 713 690 713 0.96
13 16 0.0012 0.14 14.0 2.7 1 23 719 741 719 741 0.98
14 16 0.0022 0.26 13.1 6.0 2 23 748 769 747 769 0.96
15 16 3.8e-05 0.0044 18.7 1.9 1 23 775 798 775 798 0.97
16 16 4.2 5e+02 2.8 3.3 3 23 805 826 803 826 0.95

Sequence Information

Coding Sequence
ATGAAAGAGGAACCGCTATCAGAATTTGATACAGAAAATTTGGACTGGTTGAAGCAAAAATTGAAGGCATTATGGACATCACCCAAGTTCTGCGGTTTGTGCTTAGAGAGCATGGGCAACTTTTGTTCCGTTGACATGGAGCTGATGATTAACAAACAGAAATTCTCTAGATGTTTGcaagatataattaattatgtttttaatgaaGATGTGGAGAATCTAATGTCCAGTGCATATTTATGCGATGCTTGCACAGAAAAAACTATACAAACCTACATCTTCATACACAACACTAAACAACTATCAAGAATCATGAACAATTGTGTAAGTGACATATATTCCAAAGTTATTGATGTCAACGAACAAGTTAGTCGTTCAACAGACTTTGACAATGCTAATGTAATGATAGTACTTGAGTCTGATACAGACTTATACAAGACAATTATAGATACCAAGATGACAGAGGTAGTGCCGACCGCTATTCCAGTAGCAATGAAAAAAGAAGAGCCCAAAGTAATTGCTGAAATAATGAAACCCCTTAAAGTAGAATTGCAAATGCCAAAGGAACTAACTGAGTGTAAACCGATAAAGATAGAAGCGACAccaaatataactttaaaagaaGGACATATAGTAATAAAGCCGTTGAGTTCATCAAGGACTTTTACACCGCGATACAACACATACGAATGTGGGAATTGCCCAGAGATTTTTACTACATACAGATCTCTGAAAGAACATGAGAAAGCCAAGCATAATAAGTTAGTCTTCCATTGTAATTTATGTGACAAGACGTACAATACCCGCCAGTATTTGAACATACATTACAAAACACATGCAAAAGAGAAATGCAAGTTTTGCCAAATGATTATGCCTGAAGGAGAATTAATGAACCACTTAAGAGCAAATCATGCTTATCTGGTTTTCCCGTGCAGATATTGTGATTTAGTTTACTATTCACAAGATTCTTTAGTAACACATTTCAATATTAGTCATTTAgtgaacaataataaagttaaatCACAGTGTATTATGTGTTTAAGGATTTTTAAGGAGGGAACGATAAAGAAGCACAAATGTAAGTTTAGTTGCTCAGAATGTTTTGTGATGCCTTGTGTGCATTATAAGTATTTGATGTCATATAGAGAGCAAACATTAAACCATGTTAGTAAAGTGAATTGTATGGACTGTGACTATGCTACTAGCAGAAAAGAACATCTGATTGGACATGTGAATAGAGAGCATTTAGATCATCATCCCTTTACTTGTGATGATTGTGGACAGCAGTTCTACACTAAGCTGAGTCTAAGAACCCATATAATACAGTTCCACCAAGACCTTAATTGTGAATACTGTGATTTTGTATTCAAAGACAACAACAGCTTAGAGAATCATAAAAAAGCTTGCAAATCCGTTATAAGAGCGTTCAGCTGTAATCATTGCGCCGCATCTTTCGATTTGGAAGAAGAACTGACTAACCATGAAAATTTGAGACATAGTGAGAGCGTTCACGCGTGTAATCTTTGCAAAAGCAAGTTTTTGACTGATATAGAATTGCAAGAACATCATGCAAGAGTACATGGTGGTATCCAATGCAAGAAACGAAGGAAGCACATTGAATGTTCGGTATGCGATTTAATGTTCAAAAATATCAAAGAGTTACTTCAGCATGAGAAATTACATGAACCGGATGAGATATACCCTTGCAAAGTGTGTTCAAAACAGTTCAAGAGTCTGATGAAACTTTATATGCATAATCAGAGGCACTATACTAACAGAATAAAGTGCGCTCGTTGTAATAAGAAAGTTGCTGCTTCGTTCTACGCGCAGCATGCAGTAAGGTGCCCATACAAAAGAGAAATGGCTTTAGACCACGTTTGTGAAGTCTGCGGGAAGTCCTTCCACTTGGAATCAATGCTACGTTTCCACCAAAAAGCTCATTTGGAGAGACAACCATGCCCGAAATGTGACAAAGTAATGAAGCCAAATAGTTTGAAAAGACACATGGAATTAATTCATGGTGAAGTTGCTGAAAAGCAGAAGAAATTGGGGCCAAAGCAGCCATCAATAGAATGTCAATTATGCGGTCATATTGTTAGAAAGAAGCATGATTTAGAAGCACATATGAATAGATATCATCTTAAAATTAAGCCATACGTCTGTCATATATGCAGCAAAGACTTCTGTGGGAAGATACGCTTGAAGGAGCACATAGCAACTCACACAACGGACAACAGTTGCTTTTGTTCAGTGTGTGGCAAAAAGTTTGCTAACCGTGTCTGTCTGAAAATGCATTTCAGAATGCACACAGGAGAGATGCCATACACTTGTGATATCTGTGGGCTGAAATTCAGATCTTCAAGTATGATGAAGACTCATCGGTTGAAAAAGCACTTGGATAAGACCGTTTGTTGTCCGCTCTGCGACAGCATGTTCTATATGGTACGGGATATGCGACATCACTTCAAGAAAGTACATTGGAAGTTCAAGGATAGACCGTTTGATGTTAGGGAAGTTGAAGAGTTGTCTGAGGAGTTTTATTATCTCTTTGAAGACGGGAGATTGCCGAAACTAGACACCTGA
Protein Sequence
MKEEPLSEFDTENLDWLKQKLKALWTSPKFCGLCLESMGNFCSVDMELMINKQKFSRCLQDIINYVFNEDVENLMSSAYLCDACTEKTIQTYIFIHNTKQLSRIMNNCVSDIYSKVIDVNEQVSRSTDFDNANVMIVLESDTDLYKTIIDTKMTEVVPTAIPVAMKKEEPKVIAEIMKPLKVELQMPKELTECKPIKIEATPNITLKEGHIVIKPLSSSRTFTPRYNTYECGNCPEIFTTYRSLKEHEKAKHNKLVFHCNLCDKTYNTRQYLNIHYKTHAKEKCKFCQMIMPEGELMNHLRANHAYLVFPCRYCDLVYYSQDSLVTHFNISHLVNNNKVKSQCIMCLRIFKEGTIKKHKCKFSCSECFVMPCVHYKYLMSYREQTLNHVSKVNCMDCDYATSRKEHLIGHVNREHLDHHPFTCDDCGQQFYTKLSLRTHIIQFHQDLNCEYCDFVFKDNNSLENHKKACKSVIRAFSCNHCAASFDLEEELTNHENLRHSESVHACNLCKSKFLTDIELQEHHARVHGGIQCKKRRKHIECSVCDLMFKNIKELLQHEKLHEPDEIYPCKVCSKQFKSLMKLYMHNQRHYTNRIKCARCNKKVAASFYAQHAVRCPYKREMALDHVCEVCGKSFHLESMLRFHQKAHLERQPCPKCDKVMKPNSLKRHMELIHGEVAEKQKKLGPKQPSIECQLCGHIVRKKHDLEAHMNRYHLKIKPYVCHICSKDFCGKIRLKEHIATHTTDNSCFCSVCGKKFANRVCLKMHFRMHTGEMPYTCDICGLKFRSSSMMKTHRLKKHLDKTVCCPLCDSMFYMVRDMRHHFKKVHWKFKDRPFDVREVEELSEEFYYLFEDGRLPKLDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00281660;
90% Identity
iTF_00281660;
80% Identity
-