Cspo013186.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Catocala sponsa
Gene Symbol
-
Assembly
GCA_963564715.1
Location
OY751333.1:19606902-19630372[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 9.8e-05 0.012 17.4 2.2 1 23 430 452 430 452 0.97
2 20 0.0051 0.6 12.0 0.6 1 20 458 477 458 480 0.94
3 20 2.6e-05 0.003 19.3 5.6 1 23 499 521 499 521 0.98
4 20 0.00012 0.015 17.1 4.1 1 23 527 549 527 549 0.99
5 20 4.5e-05 0.0053 18.5 5.3 1 23 555 577 555 577 0.97
6 20 1.4e-05 0.0016 20.1 7.3 1 23 583 605 583 605 0.97
7 20 8.8e-07 0.0001 23.9 2.9 1 23 611 633 611 633 0.97
8 20 0.00012 0.015 17.1 6.7 1 23 639 661 639 661 0.97
9 20 0.00012 0.014 17.1 6.5 1 23 667 689 667 689 0.97
10 20 6e-07 7e-05 24.4 1.9 1 23 695 717 695 717 0.98
11 20 6.1e-05 0.0071 18.1 7.9 1 23 723 745 723 745 0.98
12 20 5e-05 0.0059 18.3 6.8 1 23 751 773 751 773 0.98
13 20 4e-05 0.0047 18.6 4.4 1 23 779 801 779 801 0.98
14 20 3.5e-06 0.00041 22.0 6.1 1 23 807 829 807 829 0.97
15 20 2e-06 0.00023 22.8 4.1 1 23 835 857 835 857 0.98
16 20 3.7e-06 0.00044 21.9 6.0 1 23 863 885 863 885 0.98
17 20 6.9e-05 0.0081 17.9 7.8 1 23 891 913 891 913 0.97
18 20 5.4e-05 0.0063 18.2 7.4 1 23 919 941 919 941 0.96
19 20 0.0027 0.31 12.9 0.6 1 23 948 970 948 970 0.95
20 20 0.021 2.5 10.1 5.1 1 23 982 1004 982 1004 0.99

Sequence Information

Coding Sequence
ATGAATCCGGAGCATCATAATATGAACACGGGTGGTGGCCAGCCTCCGGGAAGTTCTGAGTCACAGAATCAAAGAGTTCAATCTACACAGCAACAGCAGCAGAATAACTTGCCTGCCACGACATCTGCTACTGATCTGCGAGTGAACTCGGTGAACTCGGCGGCTGTGAACGTTGCTTTGTCCAGTGTCGCAAAATATTGGGTGTTTACAAATTTATTCCCTGGGCCTATACCACAAGTATCTGTGTATGGATTACCTGCCGGTGCTAGACTTGAAAATGGAAAACCTGTTCAGGATCTCGGTCAAGCTCACGCCAGTATACTAAATGGAGATCCAAATATCATACTTGGGCATCATGGTGGACAATCCCAGGTCACAGTGTCTGCTGCGGGTGGGCAACAGATACCGGTGTCACAAATCATCGCCACCCAGTCTGGACAAACACATGAAGCTCTCGTGGCTCACAGTCAGCAAGCGGAGCTGGCGGCGGCGCAAGGGTCCGGGAACAACTCGCAGGTGTCGGTTAGCACAGGCCAGCCTACCCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACGTGGGTCATCATTCACAACAACACATAATGCAGCAACAACTCATGGCTACAGCGCGGCCGGAACACAGCAACCAGCAGATACAGTTAACGGTAAGCGAAGATGGTATCGTGACGGTGGTGGAGCCGGCGGGCGGCAAGATGGTCGACAAGGAGGAACTACACGAGGCCATCAAAATGCCCTCCGACCACGCCCTTACCGTACATCAGTTACAGCAAATTGTTGGGCAACAGGTCATAGACAGCGTAGTTCGCATAGAGCAAGCAACCGGTGAGCCTGCCAACATACTGGTGACACACAACCCTGACGGCACGACGTCGATAGAAGCGAGCGCCGCAGACCCACTCATAGTCAAGGATGAAAAGAATTCTTCCAAGATAGAAACTGCTCAGTTCGCGATACCGGCGGAAATTAAGGATATTAAAGGCATAGATTTAAAGAGTGTTGGGACAATGGGAATGGAAGGTGCAGTTGTGAAGATCTCCGCTGGCGCATCGGAACATGATCTCCATGCAATGTATAAAGTGAATGTAGAAGATCTTTCTCAGCTATTAGCTTATCATGAAGTATTTGGAAAGTTAAATTCAGAAGGACAACAGCAAGCCAAGGTTATAAGTGAGGTGGAAGTAGAGGCGGGTACGAGTGCCGCTATGTCAGAAGCGGAATCGTCACCCGGGCACCACTCCTGTGATATTTGCGGCAAAATATTCCAGTTCAGATACCAACTAATAGTTCATAGACGTTATCATGGCGAAAGCAAACCATTCACGTGTCAAGTTTGTGGTTCCGCTTTCGCGAATCCCGTCGAATTGTCGAGACATGGAAAATGTCATCTTGCTGGTGACCCAAACGAAAGACACGCTAAAAGGTTGGCTCAAGATAAGCCATACGCTTGCACGACTTGTCATAAAACATTCTCTCGGAAGGAACATTTAGATAACCACGTTCGAAGTCACACTGGGGAGACACCATACAGATGCGATTTCTGTGCAAAAACGTTCACCCGTAAGGAGCACATGGTGAACCACGTCCGTAAGCACACCGGCGAGACGCCGCACCGCTGCGACATCTGCAAAAAGAGTTTCACGAGAAAGGAACACTTCATGAACCATGTCATGTGGCACACAGGTGAAACGCCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGATCGCATACAAACGATACTCCGTTCCGATGCGAACTGTGCGGCAAGTCGTTCACAAGAAAGGAACACTTCACCAATCACATATTATGGCATACGGGCGAAACCCCACACCGCTGCGACTTTTGCTCAAAGACGTTTACGCGTAAAGAGCATCTATTAAATCACGTTCGTCAGCACACTGGGGAGTCACCACACAGATGTAACTTCTGCAGCAAGTCATTCACTCGACGAGAACATCTCGTCAACCATGTCCGACAACACACCGGAGAAACGCCCTTCCAGTGTGGATACTGTCCTAAAGCGTTCACCAGGAAGGACCATCTGGTAAACCACGTCCGCCAGCATACAGGAGAATCTCCACACAAGTGTTCCTTCTGTACAAAGTCGTTCACGCGCAAGGAGCATCTCACGAACCACGTACGACAACACACCGGCGAGTCGCCGCATCGATGTACCTTCTGCGCCAAGTCCTTCACTAGAAAAGAACATCTTACCAATCATATCAGACAGCACACGGGAGAAACGCCACACAAGTGCACGTTCTGCCCGCGCGCGTTCGCGAGGAAGGAGCACCTCAACAACCACGTGCGCCAGCACACCGGCGTCACGCCGCACTCCTGCTCCTACTGCAACAAAAGCTTCACGCGCAAGGAACACCTCGTCAACCACATACGACAACACACGGGCGAGACTCCATTCAAGTGCACGTACTGTGCGAAGTCCTTCTCTCGTAAGGAGCATCTAACGAATCACATAAACCTACATACGGGGGAGACGCCGCACAAATGTCCGTTCTGCACCAAAACATTCTCCCGAAAAGAACATTTGACGAATCATGTCAGAATTCACACGGGTGAGTCGCCGCATCGATGTGAGTTCTGTCAGAAGACATTCACACGAAAGGAACATCTAACGAATCACTTGAAACAACATACTGGCGACACCGCCCATGCGTGTAAAGTGTGCTCCAAACATTTTACTAGAAAGGAACATCTTGTTACACATATGAGGTCACACAGTTGCGGCGAACGGCCGCACATCTGCGGCGAGTGTGGCAAGTCCTTCCCGTTGAAAGGGAATTTGCTGTTCCATGAACGGTCACATAATAAGACCAACGCCAATAATGCTAACAGGCCATACAGATGTGAAGTCTGCTCTAAGGAGTTTATGTGTAAAgGACATTTGGTGTCACATCGACGTACGCACACGGAGGCGGGGGAAGCTGCGCCCAGCGCCGACGCGCCGGCTGAAGGAGAGGACTGCGGCGACTGCAATAAGTGTGTCAAACCCGAGCCTGAACAAACTGAACGGAAACATGAAATCAGGACATCGGTTGATACTAGACCAGCTGAAAATAATGTCgcacaaacacaacaaaatacGGCTACTACTGTGATGCAAATTACCAATCAGCAGGTGCGTGCGAGCGCGGGCCCGGCGGTGGCGGGCGGCggggcgggcgcgggcgcggggaCGGCGACAGGCACGTTTGCGCATGCGGTGGGCGCGCAGCACCACGCCGGCGCCGCCGTGGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence
MNPEHHNMNTGGGQPPGSSESQNQRVQSTQQQQQNNLPATTSATDLRVNSVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARLENGKPVQDLGQAHASILNGDPNIILGHHGGQSQVTVSAAGGQQIPVSQIIATQSGQTHEALVAHSQQAELAAAQGSGNNSQVSVSTGQPTHQQVPNNRVEFVQHHNIDMVNHVGHHSQQHIMQQQLMATARPEHSNQQIQLTVSEDGIVTVVEPAGGKMVDKEELHEAIKMPSDHALTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKNSSKIETAQFAIPAEIKDIKGIDLKSVGTMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQAKVISEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRLAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCDFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHIRQHTGETPHKCTFCPRAFARKEHLNNHVRQHTGVTPHSCSYCNKSFTRKEHLVNHIRQHTGETPFKCTYCAKSFSRKEHLTNHINLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTAHACKVCSKHFTRKEHLVTHMRSHSCGERPHICGECGKSFPLKGNLLFHERSHNKTNANNANRPYRCEVCSKEFMCKGHLVSHRRTHTEAGEAAPSADAPAEGEDCGDCNKCVKPEPEQTERKHEIRTSVDTRPAENNVAQTQQNTATTVMQITNQQVRASAGPAVAGGGAGAGAGTATGTFAHAVGAQHHAGAAVAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00707182;
90% Identity
iTF_01166931;
80% Identity
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