Cspo041731.1
Basic Information
- Insect
- Catocala sponsa
- Gene Symbol
- -
- Assembly
- GCA_963564715.1
- Location
- OY751356.1:4210722-4212531[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-08 1.5e-05 25.9 0.1 16 42 10 36 1 38 0.84
Sequence Information
- Coding Sequence
- ATGAAGCTTGCCATAGAAGAAGCTCAAAAAACTTCCGTTAATGCAGCTGCTAAAAGATACGGCATTAATTTTTCTACCCTACAAAGACACATTAAGAAAGGGTGCTCTAAAAAGATATTAGGCAGATTCAAAACTGTATTTACGGTGACTCAAGAGATGGAACTAGCAGAATATCTGTTTCACATGGATACTTTCTTTTTTGGGTTGACAAAAACAGAGTTCTTACAATTAGTATATCAGTACGCAGAACGAAATGGTATTATGCATCCTTTTAAAAATGGATCCGCAGGTAACGATTGGTTTGTAGGTTTTAAGAAGCGACATCCAGATATCACTCTCCGGCGACCTGAACCAACTTCTGTAGCACGCGCCAGGGGCTTCAATAAGCCACAAGTAGAGagatttttcaatattattgaAGCCGAAATTGACAAGCATAATATTGATGCGACTCGTATTTACAACGTCGATGAGACAGGGATCCAGACTACCAGTAATAAACCACCGCGAGTATTATGTAAGTCAGGCAAAAAACAGGTTGGAATTATATCAAGCGTCGAACGAGGTAAACTCACTACAGTAATATGCTGTTGTAACGCAGCGGGTTCTTTTATACctccatttttaatttttggacGGAAGAGAATGGTAGGCAGACTACTCGATGGGGCACCTCCTGGAGCAGTTGCTACTTGTACCGATAACGGTTGGGTAAATGGATCAGCATTTTTGGAGTGGCTAAGGCACTTCGTGAACACAGTAAGGCCGACTCAAGAAAAAAAAGTGCTTTTAGTGATGGACAACCACGAGTCACATAAATATATCGCTGCCCTAGAATATGCATCACAAAATCACGTTATTTTTGCAATATCTGTATTCCAAAGAGCACACGTAGGCCGCATAGTTACCCAATATGAAGTAGCAAGATTATTCGGTGAGGCTTATATGAAAGCAGCAAGTACGCAGAACGCTGTTAAAGGATTTTCGTGCACGGGCATATGGCCCACAAATAGACATGTATTTGACGATTCAGATTATATGCCAGCAACATTGACTGATAGACCAGAACCTGCCAATGTCCAAAACGCAGTCAACGATGGTCTGATAGTTGAAGAAACTCAGACAAATTTCGCTGAGAATACAATGCCTGAAGAGGTACTAAATTCTGATTCAGACCGCACAGTATCACCATCTGTTCTGGAAGCACTAAACACCTGTAATACCCGTGTAACCCCAACACCGACTACGTCAGCAGATGATCAAACTACCCCACCTGCTCGGTACTCTACAACTACTATTAACGTCTCACCTTTAACTCGAGTGGCATTGACTCCAATGGATATCCGGCCATCACCTAAAATGCCACTAAATAAAATCACTCACAAACGTAAAACACAGAAAGCTGAAATCCTGACTAGCACACCTATAAAGGAACAGCAGAAAGAAAAGgaagagaaaaaaaatagatttaagaaaaaacttAATACAGAAACAGCAAGCACAAGCAAACAACGGAAGGCATTAGAACGTATTAAGACTAAACGAGGACCAAAATACAATCGGAAAGAAAAAACGGAGTATCGGTGTCTAGTTTGTGGTGAGCTTTACATAGAACCACCTGCAGAAGACTGGATCCGGTGTGACGATTGTGAGCTATGGTCACATGAGGCTTGCACAGCTTACTCTGGACAAGGATCATATTATTGTGACTTCTGTCACCAATAA
- Protein Sequence
- MKLAIEEAQKTSVNAAAKRYGINFSTLQRHIKKGCSKKILGRFKTVFTVTQEMELAEYLFHMDTFFFGLTKTEFLQLVYQYAERNGIMHPFKNGSAGNDWFVGFKKRHPDITLRRPEPTSVARARGFNKPQVERFFNIIEAEIDKHNIDATRIYNVDETGIQTTSNKPPRVLCKSGKKQVGIISSVERGKLTTVICCCNAAGSFIPPFLIFGRKRMVGRLLDGAPPGAVATCTDNGWVNGSAFLEWLRHFVNTVRPTQEKKVLLVMDNHESHKYIAALEYASQNHVIFAISVFQRAHVGRIVTQYEVARLFGEAYMKAASTQNAVKGFSCTGIWPTNRHVFDDSDYMPATLTDRPEPANVQNAVNDGLIVEETQTNFAENTMPEEVLNSDSDRTVSPSVLEALNTCNTRVTPTPTTSADDQTTPPARYSTTTINVSPLTRVALTPMDIRPSPKMPLNKITHKRKTQKAEILTSTPIKEQQKEKEEKKNRFKKKLNTETASTSKQRKALERIKTKRGPKYNRKEKTEYRCLVCGELYIEPPAEDWIRCDDCELWSHEACTAYSGQGSYYCDFCHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00908791;
- 90% Identity
- iTF_00282253;
- 80% Identity
- -