Cspo029050.1
Basic Information
- Insect
- Catocala sponsa
- Gene Symbol
- -
- Assembly
- GCA_963564715.1
- Location
- OY751345.1:17094258-17096131[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-08 1e-05 26.5 0.1 1 42 16 55 16 57 0.87
Sequence Information
- Coding Sequence
- atggttaataaatatgtaagaaaaACCACAAAATACGCGTCGTGGGATGAAACCGCCATGAAGCTTGCCATAGAAGAAGCTCAAAAAACTTCCGTTAATGCAGCTGCTAAAAGATACGGCATTAATCTTTCTACCCTACAAAGACACATTAAGAAAGGCTGCTCTAAAAAGATATTAGGCAGATTCAAAACTGTATTTACGGTGACTCAAGAGATGGAACTAGCAGAATATCTGTTTCACATGGATACTTTGTTTTTTGGGTTGACAAAAACAGAGTTCTTACAATTAGTATATCAGTACGCAGAACGAAATGGTATTATGCATCCTTTTAAAAATGGATCCGCAGGTAACGATTGGTTTGTAGGTTTTAAGAAGCGACATCCAGATATCACTCTCCGGCGACCTGAACCAACTTCTGTAGCACGCGCCAGGGGCTTCAATAGGCCACAAGTAGAGagatttttcaatattattgaAGCCGAAATTGACAAGCATAATATTGATGCGACTCGTATTTACAACGTCGATGAGACAGGGATCCAGACTACCAGTAATAAACCACCGCGAGTATTATGTAAGTCAGGCAAAAAACAGGTTGGAATTATATCAAGCGTCGAACGAGGTAAACTCACTACAGTAATATGCTGttgtaacgcagcgagttcttTTATAcctctatttttaatttttggacGGAAGAGAATGGTAGGCAGACTACTCGATGGGGCACCTCCTGGAGCAGTTGCTACTTGTACCGATAACGGTTGGGTAAATGGACCAGCATTTTTGGAGTGGCTAAGGCACTTCGTGAACACAGTAAGGCCGACTCAAGAAAAAAAAGTGCTTTTAGTGATGGACAACCACGAGTCACATAAATATCTCGCTGCCCTAGAATATGCATCACAAAATCACGTTATTTTTgCTTATATGAAAGCAGCAAGTACGCAGAACGCTGTTAAAGGATTTTCGTGCACGGGCATATGGCCCACAAATAGACATGTATTTGACGATTCAGATTATATGCCAGCAACATTGACTGATAGACCAGAACCTGCCAATGTCCAAAACGCAGTCAACGATGGTCTGATAATTGAAGAAACTCAGACAAATTTCGCTGAGAATACAATGCCTGAAGAGGTACTAAATTCTGATTCAGACCGCACAGTATCACCATCTGTTCTGGAAGCACTAAACACCTGTAATACCCGTGTAACCCCAACACCGACTACGTCAGCAGATGATCAAACTACCCCACCTGCTCGGTACTCTACAACTACTATTAACGTCTCACCTTTAACTCGAGTGGCATTGACTCCAATGGATATCCGGCCATCACCTAAAATGCCACTAAATAAAATCACTCACAAACGTAAAACACAGAAAGCTGAAATCCTGACTAGCACACCTATAAAGGAACAGCAGAAAGAAAAGgaagagaaaaaaaatagatttaagaaaaaacttAATACAGAAACAGCAAGCACAAGCAAACAACGGAAGGCATTAGAACGTATTAAGACTAAACGAGGACCAAAATACAATCGGAAAGAAAAAACGGAGTATCGGTGTCTAGTTTGTGGTGAGCTTTACATAGAACCACCTGCAGAAGACTGGATCCGGTGTGACGATTGTGAGCTATGGTCACATGAGGCTTGCACAGCTTACTCTGGACGAGGATCATATTATTGTGACTTCTGTCACCAATAA
- Protein Sequence
- MVNKYVRKTTKYASWDETAMKLAIEEAQKTSVNAAAKRYGINLSTLQRHIKKGCSKKILGRFKTVFTVTQEMELAEYLFHMDTLFFGLTKTEFLQLVYQYAERNGIMHPFKNGSAGNDWFVGFKKRHPDITLRRPEPTSVARARGFNRPQVERFFNIIEAEIDKHNIDATRIYNVDETGIQTTSNKPPRVLCKSGKKQVGIISSVERGKLTTVICCCNAASSFIPLFLIFGRKRMVGRLLDGAPPGAVATCTDNGWVNGPAFLEWLRHFVNTVRPTQEKKVLLVMDNHESHKYLAALEYASQNHVIFAYMKAASTQNAVKGFSCTGIWPTNRHVFDDSDYMPATLTDRPEPANVQNAVNDGLIIEETQTNFAENTMPEEVLNSDSDRTVSPSVLEALNTCNTRVTPTPTTSADDQTTPPARYSTTTINVSPLTRVALTPMDIRPSPKMPLNKITHKRKTQKAEILTSTPIKEQQKEKEEKKNRFKKKLNTETASTSKQRKALERIKTKRGPKYNRKEKTEYRCLVCGELYIEPPAEDWIRCDDCELWSHEACTAYSGRGSYYCDFCHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00908791;
- 90% Identity
- iTF_00282253;
- 80% Identity
- -