Cspo029948.1
Basic Information
- Insect
- Catocala sponsa
- Gene Symbol
- clz9
- Assembly
- GCA_963564715.1
- Location
- OY751346.1:5345488-5347080[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.5e-09 3.3e-06 28.1 0.0 3 39 17 52 15 58 0.88
Sequence Information
- Coding Sequence
- atGGTTCGTACTTACCAAAGAAAAACCGAAAAGCCATCTTGGTCAAAAGAAACTTTATGTCGGGCAGTTGAAGCTGTCCGATCAGGCTTATCTGGGTATGAAGCagctaaaacatataacataccTCGTAAAACGATCATGGATCACGTGACGGGTCGAAGGGTCCAGAAATCATCTACACAAGGTAGACCACCAGCCTTATCGGCTGATATTGAAACAGAGTTAGCTAACTGTTTACATATAATGGAGAGGCATGGCTTCGGGTTAAGTCGAAAAGAGGTAATAGAACTGGTCGGCGAGtatgttaagaaaaacaaaataaatacaccaTTTACCAATGGCATCCCTGGAAACGATTGGTTTTCTAATTTTATGACTCGACATAGATTGTCAATAAAAAAACCTCAAGCGGTTGAGATTGCCCGTAAGAAAGCGGCTGACCCGTTCATTATACAAGAATTTTACGACATTGTCGAAAAAGTTATTAATGAACTAGAGCTTGAAAACAAACCAGagagaatttataatattgacgaAACAAGCTATTGCAGTGACCCTAAAAAAACCAAAGTGGTCGGCTTAAAGGGTTATCCTTCAACTAGAACAACATCGTCAGCCGGTAAAGCAAACACAACCGTCTTGGTTGCCAGCAATGCAGCTGGAGGCAAAGGGCCTCCATTTATAATTTTCAAAGGTAAGCATGTGTGGAGTACATGGACGTCTGAGGAAGCATATCCTGGCACTTTGTATACTGCGACATCCAATGGTTGGATTGAATCCGACGCTTTTGCAGAGTTCAtgacaaaaagtttcattcctATGGTCAAAGATGAGAAAGAGCCAACGCTCCTAATTTATGATGGTCATAGCACTCACGTGCAACTGGCTGTGGTCGAAAAAGcaaaacagaataatatcacCATCATAAAATTGCTACCGCACTCAAGCCACCTGCTTCAACCACTTGATCTAAGCGTATTCAAACCGTATAAAGACGCCTGGGACCAGGAAATGGTTAAATGGCAGCGCACACATAAGGGCGAAAAGTTACCTAAAGAACAGTTTTCAGCGATAGTGGGAAGAGTTTGGCAAAATATTAattccaatattataaagaagggGTTCGAAAAAAGCGGAATCTATCCGTTTAACAGAAATGCTGTACCGGAACATAAACTAGACCCAGAGGCCCTAAAAAGATGGAAAAAGCaccatgaaaatttattgaaagaaCAAACACTCGCTTGTAGCTCTCCATTAACCTTAACCAAATTATGCCTGAATAAAATtaactgttttattaaattaaagtcGACTACAGTTACCACTTTGCCAAATGACCTTAGTTCTAAGTCTTTAGAGAAAACATCTTTCGAAGATTTATTAATACAATCTACAAAACAGTCGCAGACTGCCAATGTCAAGAGAAAGAGAGTAAAAATTTCCGCAAGTGCAGAGGTGATAACGTATCAGGAAGTCATTGAAAGATTGAAACAGAAAGAAGACGATAAAGCCAAAAAAGaacaagaaaaagaagaaaaacgAAAGCAACGagaacaaaaaaagaaagatgtaataagtaaacaaaattaa
- Protein Sequence
- MVRTYQRKTEKPSWSKETLCRAVEAVRSGLSGYEAAKTYNIPRKTIMDHVTGRRVQKSSTQGRPPALSADIETELANCLHIMERHGFGLSRKEVIELVGEYVKKNKINTPFTNGIPGNDWFSNFMTRHRLSIKKPQAVEIARKKAADPFIIQEFYDIVEKVINELELENKPERIYNIDETSYCSDPKKTKVVGLKGYPSTRTTSSAGKANTTVLVASNAAGGKGPPFIIFKGKHVWSTWTSEEAYPGTLYTATSNGWIESDAFAEFMTKSFIPMVKDEKEPTLLIYDGHSTHVQLAVVEKAKQNNITIIKLLPHSSHLLQPLDLSVFKPYKDAWDQEMVKWQRTHKGEKLPKEQFSAIVGRVWQNINSNIIKKGFEKSGIYPFNRNAVPEHKLDPEALKRWKKHHENLLKEQTLACSSPLTLTKLCLNKINCFIKLKSTTVTTLPNDLSSKSLEKTSFEDLLIQSTKQSQTANVKRKRVKISASAEVITYQEVIERLKQKEDDKAKKEQEKEEKRKQREQKKKDVISKQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00282239; iTF_00255779; iTF_00040743; iTF_00637561; iTF_00282238;
- 90% Identity
- iTF_00282239;
- 80% Identity
- -